RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 NUTM2GQ5VZR2 741 aa11.89□□□□□ -0.51
NPLOC4-211ENST00000573212 LARP1Q6PKG0 1096 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-211ENST00000573212 RAB3GAP2Q9H2M9 1393 aa11.89□□□□□ -0.51
NPLOC4-211ENST00000573212 ATP7BP35670 1465 aa11.89□□□□□ -0.51
NPLOC4-211ENST00000573212 TCP11L2Q8N4U5 519 aa11.88□□□□□ -0.51
NPLOC4-211ENST00000573212 THRAP3Q9Y2W1 955 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-211ENST00000573212 SSH2Q76I76 1423 aa11.87□□□□□ -0.51
NPLOC4-211ENST00000573212 NBPF14Q5TI25 921 aa11.87□□□□□ -0.51
NPLOC4-211ENST00000573212 MIER1Q8N108 512 aa11.87□□□□□ -0.51
NPLOC4-211ENST00000573212 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
NPLOC4-211ENST00000573212 USP35Q9P2H5 1018 aa11.87□□□□□ -0.51
NPLOC4-211ENST00000573212 CPDO75976 1380 aa11.87□□□□□ -0.51
NPLOC4-211ENST00000573212 USP19O94966 1318 aa11.86□□□□□ -0.51
NPLOC4-211ENST00000573212 TNS1Q9HBL0 1735 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-211ENST00000573212 GCP02774 474 aa11.86□□□□□ -0.51
NPLOC4-211ENST00000573212 ABTB2Q8N961 1025 aa11.86□□□□□ -0.51
NPLOC4-211ENST00000573212 CAMTA1Q9Y6Y1 1673 aa11.86□□□□□ -0.51
NPLOC4-211ENST00000573212 C11orf95C9JLR9 678 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-211ENST00000573212 KCNQ2O43526 872 aa11.84□□□□□ -0.51
NPLOC4-211ENST00000573212 NLRP13Q86W25 1043 aa11.84□□□□□ -0.51
NPLOC4-211ENST00000573212 PLSCR1O15162 318 aa11.83□□□□□ -0.52
NPLOC4-211ENST00000573212 SPON1Q9HCB6 807 aa11.83□□□□□ -0.52
NPLOC4-211ENST00000573212 YY1P25490 414 aa11.82□□□□□ -0.52
NPLOC4-211ENST00000573212 NBPF1Q3BBV0 1214 aa11.82□□□□□ -0.52
NPLOC4-211ENST00000573212 BRD4O60885 1362 aaPredicted RBP11.81□□□□□ -0.52
NPLOC4-211ENST00000573212 PHRF1Q9P1Y6 1649 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-211ENST00000573212 LMO7Q8WWI1 1683 aa11.8□□□□□ -0.52
NPLOC4-211ENST00000573212 RREB1Q92766 1687 aa11.79□□□□□ -0.52
NPLOC4-211ENST00000573212 COL5A2P05997 1499 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-211ENST00000573212 PTF1AQ7RTS3 328 aa11.79□□□□□ -0.52
NPLOC4-211ENST00000573212 BCL11BQ9C0K0 894 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-211ENST00000573212 CABP2Q9NPB3 220 aa11.79□□□□□ -0.52
NPLOC4-211ENST00000573212 NRKQ7Z2Y5 1582 aa11.79□□□□□ -0.52
NPLOC4-211ENST00000573212 AATKQ6ZMQ8 1374 aa11.79□□□□□ -0.52
NPLOC4-211ENST00000573212 CRB1P82279 1406 aa11.78□□□□□ -0.52
NPLOC4-211ENST00000573212 ARHGEF28Q8N1W1 1705 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-211ENST00000573212 ANO8Q9HCE9 1232 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-211ENST00000573212 CABP1Q9NZU7 370 aa11.78□□□□□ -0.52
NPLOC4-211ENST00000573212 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-211ENST00000573212 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
NPLOC4-211ENST00000573212 NLRP6P59044 892 aa11.77□□□□□ -0.53
NPLOC4-211ENST00000573212 SRPK2P78362 688 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-211ENST00000573212 DDB1Q16531 1140 aa11.77□□□□□ -0.53
NPLOC4-211ENST00000573212 MARCH10Q8NA82 808 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-211ENST00000573212 PPP1R1BQ9UD71 204 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-211ENST00000573212 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-211ENST00000573212 NINLQ9Y2I6 1382 aa11.77□□□□□ -0.53
NPLOC4-211ENST00000573212 ITSN1Q15811 1721 aa11.77□□□□□ -0.53
NPLOC4-211ENST00000573212 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.53
NPLOC4-211ENST00000573212 TOPAZ1Q8N9V7 1692 aa11.76□□□□□ -0.53
NPLOC4-211ENST00000573212 PDGFDQ9GZP0 370 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-211ENST00000573212 NUP188Q5SRE5 1749 aa11.76□□□□□ -0.53
NPLOC4-211ENST00000573212 CENPJQ9HC77 1338 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-211ENST00000573212 OVOS2A0A0G2JMS6 1433 aa11.76□□□□□ -0.53
NPLOC4-211ENST00000573212 OVOS2A0A0J9YW53 1432 aa11.76□□□□□ -0.53
NPLOC4-211ENST00000573212 BCL9O00512 1426 aa11.76□□□□□ -0.53
NPLOC4-211ENST00000573212 OVOS2Q6IE36 1432 aa11.76□□□□□ -0.53
NPLOC4-211ENST00000573212 PTGER2P43116 358 aa11.75□□□□□ -0.53
NPLOC4-211ENST00000573212 TOM1L2Q6ZVM7 507 aa11.75□□□□□ -0.53
NPLOC4-211ENST00000573212 ARHGEF25Q86VW2 580 aa11.75□□□□□ -0.53
NPLOC4-211ENST00000573212 HS6ST3Q8IZP7 471 aa11.74□□□□□ -0.53
NPLOC4-211ENST00000573212 CDCA7Q9BWT1 371 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-211ENST00000573212 WDR17Q8IZU2 1322 aa11.74□□□□□ -0.53
NPLOC4-211ENST00000573212 USP6P35125 1406 aa11.74□□□□□ -0.53
NPLOC4-211ENST00000573212 PEAK1Q9H792 1746 aa11.74□□□□□ -0.53
NPLOC4-211ENST00000573212 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-211ENST00000573212 SLIT3O75094 1523 aa11.73□□□□□ -0.53
NPLOC4-211ENST00000573212 CARD10Q9BWT7 1032 aa11.73□□□□□ -0.53
NPLOC4-211ENST00000573212 TTC21BQ7Z4L5 1316 aa11.72□□□□□ -0.53
NPLOC4-211ENST00000573212 ZBTB7CA1YPR0 619 aa11.72□□□□□ -0.53
NPLOC4-211ENST00000573212 TXNRD1Q16881 649 aa11.72□□□□□ -0.53
NPLOC4-211ENST00000573212 EXOC5O00471 708 aa11.71□□□□□ -0.53
NPLOC4-211ENST00000573212 ZBTB7AO95365 584 aa11.71□□□□□ -0.53
NPLOC4-211ENST00000573212 SLC15A2Q16348 729 aa11.71□□□□□ -0.53
NPLOC4-211ENST00000573212 KCNH5Q8NCM2 988 aa11.71□□□□□ -0.53
NPLOC4-211ENST00000573212 SGIP1Q9BQI5 828 aa11.71□□□□□ -0.53
NPLOC4-211ENST00000573212 SYT17Q9BSW7 474 aa11.71□□□□□ -0.53
NPLOC4-211ENST00000573212 KIAA1210Q9ULL0 1709 aa11.71□□□□□ -0.54
NPLOC4-211ENST00000573212 COL18A1P39060 1754 aa11.69□□□□□ -0.54
NPLOC4-211ENST00000573212 EVC2Q86UK5 1308 aa11.68□□□□□ -0.54
NPLOC4-211ENST00000573212 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
NPLOC4-211ENST00000573212 STK32BQ9NY57 414 aa11.68□□□□□ -0.54
NPLOC4-211ENST00000573212 CPSF1Q10570 1443 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-211ENST00000573212 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-211ENST00000573212 RGPD4Q7Z3J3 1758 aa11.67□□□□□ -0.54
NPLOC4-211ENST00000573212 CASZ1Q86V15 1759 aa11.67□□□□□ -0.54
NPLOC4-211ENST00000573212 TTC21AQ8NDW8 1320 aa11.67□□□□□ -0.54
NPLOC4-211ENST00000573212 ZNF784Q8NCA9 323 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-211ENST00000573212 FHDC1Q9C0D6 1143 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-211ENST00000573212 MTFR1LQ9H019 292 aa11.67□□□□□ -0.54
NPLOC4-211ENST00000573212 LRRC37A3O60309 1634 aa11.67□□□□□ -0.54
NPLOC4-211ENST00000573212 CCDC7Q96M83 1385 aa11.67□□□□□ -0.54
NPLOC4-211ENST00000573212 SBF2Q86WG5 1849 aa11.66□□□□□ -0.54
NPLOC4-211ENST00000573212 CSB-PGBD3P0DP91 1061 aa11.66□□□□□ -0.54
NPLOC4-211ENST00000573212 RNF25Q96BH1 459 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-211ENST00000573212 PIK3C2AO00443 1686 aa11.64□□□□□ -0.55
NPLOC4-211ENST00000573212 USP31Q70CQ4 1352 aa11.64□□□□□ -0.55
NPLOC4-211ENST00000573212 SOX12O15370 315 aa11.63□□□□□ -0.55
NPLOC4-211ENST00000573212 NBR1Q14596 966 aa11.63□□□□□ -0.55
NPLOC4-211ENST00000573212 ACSBG1Q96GR2 724 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms