RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 HELBQ8NG08 1087 aaPredicted RBP8.66□□□□□ -1.02
ERCC4-204ENST00000573018 AK7Q96M32 723 aa8.66□□□□□ -1.02
ERCC4-204ENST00000573018 COL25A1Q9BXS0 654 aaPredicted RBP8.66□□□□□ -1.02
ERCC4-204ENST00000573018 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.02
ERCC4-204ENST00000573018 ADAMTS8Q9UP79 889 aa8.65□□□□□ -1.02
ERCC4-204ENST00000573018 GDF11O95390 407 aa8.64□□□□□ -1.03
ERCC4-204ENST00000573018 RASSF7Q02833 373 aa8.64□□□□□ -1.03
ERCC4-204ENST00000573018 ERFEQ4G0M1 354 aa8.64□□□□□ -1.03
ERCC4-204ENST00000573018 RNFT1Q5M7Z0 435 aa8.64□□□□□ -1.03
ERCC4-204ENST00000573018 TMEM151AQ8N4L1 468 aa8.64□□□□□ -1.03
ERCC4-204ENST00000573018 CCDC155Q8N6L0 562 aa8.64□□□□□ -1.03
ERCC4-204ENST00000573018 TUSC1Q2TAM9 212 aa8.62□□□□□ -1.03
ERCC4-204ENST00000573018 SVOPQ8N4V2 548 aa8.62□□□□□ -1.03
ERCC4-204ENST00000573018 PGPEP1Q9NXJ5 209 aa8.62□□□□□ -1.03
ERCC4-204ENST00000573018 SPINT1O43278 529 aa8.61□□□□□ -1.03
ERCC4-204ENST00000573018 PDE4DQ08499 809 aa8.61□□□□□ -1.03
ERCC4-204ENST00000573018 ZNF385CQ66K41 422 aaPredicted RBP8.61□□□□□ -1.03
ERCC4-204ENST00000573018 Q6ZVU0 165 aa8.61□□□□□ -1.03
ERCC4-204ENST00000573018 AGBL1Q96MI9 1066 aa8.61□□□□□ -1.03
ERCC4-204ENST00000573018 CDC14CA4D256 554 aa8.6□□□□□ -1.03
ERCC4-204ENST00000573018 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
ERCC4-204ENST00000573018 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
ERCC4-204ENST00000573018 WHAMMQ8TF30 809 aa8.6□□□□□ -1.03
ERCC4-204ENST00000573018 ARHGAP9Q9BRR9 750 aa8.6□□□□□ -1.03
ERCC4-204ENST00000573018 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
ERCC4-204ENST00000573018 SLC35F4A4IF30 521 aa8.59□□□□□ -1.03
ERCC4-204ENST00000573018 RNF225M0QZC1 329 aaPredicted RBP8.59□□□□□ -1.03
ERCC4-204ENST00000573018 RELBQ01201 579 aa8.59□□□□□ -1.03
ERCC4-204ENST00000573018 VWA5B2Q8N398 1253 aa8.59□□□□□ -1.03
ERCC4-204ENST00000573018 NANOS1Q8WY41 292 aaKnown RBP8.59□□□□□ -1.03
ERCC4-204ENST00000573018 GPKOWQ92917 476 aaPredicted RBP eCLIP8.59□□□□□ -1.03
ERCC4-204ENST00000573018 SLC10A4Q96EP9 437 aa8.59□□□□□ -1.03
ERCC4-204ENST00000573018 KCTD15Q96SI1 283 aaPredicted RBP8.59□□□□□ -1.03
ERCC4-204ENST00000573018 CTSOP43234 321 aaPredicted RBP8.58□□□□□ -1.04
ERCC4-204ENST00000573018 INSM2Q96T92 566 aaPredicted RBP8.58□□□□□ -1.04
ERCC4-204ENST00000573018 ITGA6P23229 1130 aa8.57□□□□□ -1.04
ERCC4-204ENST00000573018 LRRN4Q8WUT4 740 aa8.57□□□□□ -1.04
ERCC4-204ENST00000573018 ZBTB33Q86T24 672 aa8.56□□□□□ -1.04
ERCC4-204ENST00000573018 POLMQ9NP87 494 aaPredicted RBP8.56□□□□□ -1.04
ERCC4-204ENST00000573018 IRS1P35568 1242 aa8.55□□□□□ -1.04
ERCC4-204ENST00000573018 INTS6LQ5JSJ4 861 aaKnown RBP8.55□□□□□ -1.04
ERCC4-204ENST00000573018 PDXDC2PQ6P474 469 aa8.55□□□□□ -1.04
ERCC4-204ENST00000573018 SV2AQ7L0J3 742 aa8.55□□□□□ -1.04
ERCC4-204ENST00000573018 ZNF395Q9H8N7 513 aaPredicted RBP8.55□□□□□ -1.04
ERCC4-204ENST00000573018 FKBPLQ9UIM3 349 aa8.55□□□□□ -1.04
ERCC4-204ENST00000573018 DHX9Q08211 1270 aaKnown RBP8.54□□□□□ -1.04
ERCC4-204ENST00000573018 GPAT2Q6NUI2 795 aa8.54□□□□□ -1.04
ERCC4-204ENST00000573018 SLC24A3Q9HC58 644 aa8.54□□□□□ -1.04
ERCC4-204ENST00000573018 SLURP2P0DP57 97 aa8.53□□□□□ -1.04
ERCC4-204ENST00000573018 RAB15P59190 212 aa8.53□□□□□ -1.04
ERCC4-204ENST00000573018 NR6A1Q15406 480 aa8.53□□□□□ -1.04
ERCC4-204ENST00000573018 TMPRSS4Q9NRS4 437 aa8.53□□□□□ -1.04
ERCC4-204ENST00000573018 CDV3Q9UKY7 258 aaKnown RBP8.53□□□□□ -1.04
ERCC4-204ENST00000573018 ARHGEF15O94989 841 aa8.52□□□□□ -1.05
ERCC4-204ENST00000573018 MARSP56192 900 aaKnown RBP8.52□□□□□ -1.05
ERCC4-204ENST00000573018 RNF217Q8TC41 542 aa8.52□□□□□ -1.05
ERCC4-204ENST00000573018 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.05
ERCC4-204ENST00000573018 SENP3-EIF4A1A0A087X0R7 540 aa8.51□□□□□ -1.05
ERCC4-204ENST00000573018 FBXO31Q5XUX0 539 aaPredicted RBP8.51□□□□□ -1.05
ERCC4-204ENST00000573018 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
ERCC4-204ENST00000573018 ADAM32Q8TC27 787 aa8.5□□□□□ -1.05
ERCC4-204ENST00000573018 ADAMTS2O95450 1211 aa8.49□□□□□ -1.05
ERCC4-204ENST00000573018 PTK2Q05397 1052 aa8.49□□□□□ -1.05
ERCC4-204ENST00000573018 LYPD4Q6UWN0 246 aa8.49□□□□□ -1.05
ERCC4-204ENST00000573018 ZNF784Q8NCA9 323 aaPredicted RBP8.49□□□□□ -1.05
ERCC4-204ENST00000573018 DNMT3AQ9Y6K1 912 aaPredicted RBP8.49□□□□□ -1.05
ERCC4-204ENST00000573018 FOXD4L5Q5VV16 416 aaPredicted RBP8.48□□□□□ -1.05
ERCC4-204ENST00000573018 CUEDC1Q9NWM3 386 aaPredicted RBP8.48□□□□□ -1.05
ERCC4-204ENST00000573018 ATP1B4Q9UN42 357 aaPredicted RBP8.48□□□□□ -1.05
ERCC4-204ENST00000573018 ADH1AP07327 375 aa8.47□□□□□ -1.05
ERCC4-204ENST00000573018 ADD1P35611 737 aaKnown RBP8.47□□□□□ -1.05
ERCC4-204ENST00000573018 EPS8L1Q8TE68 723 aa8.46□□□□□ -1.06
ERCC4-204ENST00000573018 ZC3H4Q9UPT8 1303 aaKnown RBP8.46□□□□□ -1.06
ERCC4-204ENST00000573018 ERVH48-1M5A8F1 160 aa8.45□□□□□ -1.06
ERCC4-204ENST00000573018 AP1G2O75843 785 aa8.45□□□□□ -1.06
ERCC4-204ENST00000573018 MAP3K10Q02779 954 aa8.45□□□□□ -1.06
ERCC4-204ENST00000573018 GAS6Q14393 721 aa8.45□□□□□ -1.06
ERCC4-204ENST00000573018 NBPF20Q3BBV1 942 aa8.45□□□□□ -1.06
ERCC4-204ENST00000573018 KANK3Q6NY19 840 aa8.45□□□□□ -1.06
ERCC4-204ENST00000573018 PROCA1Q8NCQ7 364 aaPredicted RBP8.45□□□□□ -1.06
ERCC4-204ENST00000573018 SCARF2Q96GP6 870 aaPredicted RBP8.45□□□□□ -1.06
ERCC4-204ENST00000573018 LILRA1O75019 489 aa8.44□□□□□ -1.06
ERCC4-204ENST00000573018 RHOQP17081 205 aa8.44□□□□□ -1.06
ERCC4-204ENST00000573018 PTGIRP43119 386 aa8.44□□□□□ -1.06
ERCC4-204ENST00000573018 SRSF11Q05519 484 aaKnown RBP8.44□□□□□ -1.06
ERCC4-204ENST00000573018 LYSMD3Q7Z3D4 306 aa8.44□□□□□ -1.06
ERCC4-204ENST00000573018 KDF1Q8NAX2 398 aaPredicted RBP8.44□□□□□ -1.06
ERCC4-204ENST00000573018 CELA2BP08218 269 aaPredicted RBP8.43□□□□□ -1.06
ERCC4-204ENST00000573018 PRICKLE2Q7Z3G6 844 aa8.43□□□□□ -1.06
ERCC4-204ENST00000573018 DZIP3Q86Y13 1208 aaKnown RBP8.43□□□□□ -1.06
ERCC4-204ENST00000573018 GPSM3Q9Y4H4 160 aa8.43□□□□□ -1.06
ERCC4-204ENST00000573018 IGHA1P01876 353 aa8.42□□□□□ -1.06
ERCC4-204ENST00000573018 HMX1Q9NP08 348 aaPredicted RBP8.42□□□□□ -1.06
ERCC4-204ENST00000573018 CYLDQ9NQC7 956 aa8.42□□□□□ -1.06
ERCC4-204ENST00000573018 GPR25O00155 361 aa8.41□□□□□ -1.06
ERCC4-204ENST00000573018 SKIV2LQ15477 1246 aaKnown RBP8.41□□□□□ -1.06
ERCC4-204ENST00000573018 FOXK2Q01167 660 aa8.4□□□□□ -1.06
ERCC4-204ENST00000573018 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.4□□□□□ -1.06
ERCC4-204ENST00000573018 CNTNAP5Q8WYK1 1306 aa8.39□□□□□ -1.07
ERCC4-204ENST00000573018 SH3D19Q5HYK7 790 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms