RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ASXL2Q76L83 1435 aa9.36□□□□□ -0.91
SF3B3-214ENST00000572365 CUL7Q14999 1698 aa9.36□□□□□ -0.91
SF3B3-214ENST00000572365 ZC3H4Q9UPT8 1303 aaKnown RBP9.35□□□□□ -0.91
SF3B3-214ENST00000572365 TLL1O43897 1013 aa9.35□□□□□ -0.91
SF3B3-214ENST00000572365 CCNYL3P0C7X3 344 aa9.35□□□□□ -0.91
SF3B3-214ENST00000572365 SOX11P35716 441 aa9.35□□□□□ -0.91
SF3B3-214ENST00000572365 PTPN5P54829 565 aa9.35□□□□□ -0.91
SF3B3-214ENST00000572365 PRDM9Q9NQV7 894 aa9.35□□□□□ -0.91
SF3B3-214ENST00000572365 WRNQ14191 1432 aaPredicted RBP eCLIP9.34□□□□□ -0.91
SF3B3-214ENST00000572365 NUDT12Q9BQG2 462 aa9.34□□□□□ -0.91
SF3B3-214ENST00000572365 IL21Q9HBE4 155 aa9.34□□□□□ -0.91
SF3B3-214ENST00000572365 MYT1LQ9UL68 1186 aa9.34□□□□□ -0.91
SF3B3-214ENST00000572365 PTPRGP23470 1445 aa9.33□□□□□ -0.92
SF3B3-214ENST00000572365 RUSC2Q8N2Y8 1516 aa9.32□□□□□ -0.92
SF3B3-214ENST00000572365 KIF21BO75037 1637 aa9.32□□□□□ -0.92
SF3B3-214ENST00000572365 CTHP32929 405 aa9.32□□□□□ -0.92
SF3B3-214ENST00000572365 KCNH2Q12809 1159 aa9.32□□□□□ -0.92
SF3B3-214ENST00000572365 NR1H3Q13133 447 aa9.32□□□□□ -0.92
SF3B3-214ENST00000572365 ZNF516Q92618 1163 aa9.32□□□□□ -0.92
SF3B3-214ENST00000572365 ZBBXA8MT70 800 aa9.31□□□□□ -0.92
SF3B3-214ENST00000572365 FBXO45P0C2W1 286 aa9.31□□□□□ -0.92
SF3B3-214ENST00000572365 EIF4G2P78344 907 aaKnown RBP eCLIP9.3□□□□□ -0.92
SF3B3-214ENST00000572365 ARMC2Q8NEN0 867 aa9.3□□□□□ -0.92
SF3B3-214ENST00000572365 GPKOWQ92917 476 aaPredicted RBP eCLIP9.3□□□□□ -0.921e-6■□□□□ 11
SF3B3-214ENST00000572365 TOP2BQ02880 1626 aa9.3□□□□□ -0.92
SF3B3-214ENST00000572365 SLC6A16Q9GZN6 736 aa9.29□□□□□ -0.92
SF3B3-214ENST00000572365 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
SF3B3-214ENST00000572365 ERICH3Q5RHP9 1530 aa9.28□□□□□ -0.92
SF3B3-214ENST00000572365 ABCC2Q92887 1545 aa9.28□□□□□ -0.92
SF3B3-214ENST00000572365 PPP1R15AO75807 674 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-214ENST00000572365 SEMA3FQ13275 785 aa9.28□□□□□ -0.92
SF3B3-214ENST00000572365 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
SF3B3-214ENST00000572365 PLB1Q6P1J6 1458 aa9.28□□□□□ -0.92
SF3B3-214ENST00000572365 CFAP70Q5T0N1 1121 aa9.27□□□□□ -0.93
SF3B3-214ENST00000572365 NBPF14Q5TI25 921 aa9.27□□□□□ -0.93
SF3B3-214ENST00000572365 UCN2Q96RP3 112 aa9.27□□□□□ -0.93
SF3B3-214ENST00000572365 PPP1R12CQ9BZL4 782 aa9.27□□□□□ -0.93
SF3B3-214ENST00000572365 GLI2P10070 1586 aa9.27□□□□□ -0.93
SF3B3-214ENST00000572365 ARID4BQ4LE39 1312 aaPredicted RBP9.27□□□□□ -0.93
SF3B3-214ENST00000572365 MAP3K4Q9Y6R4 1608 aa9.27□□□□□ -0.93
SF3B3-214ENST00000572365 EPRSP07814 1512 aaKnown RBP9.26□□□□□ -0.93
SF3B3-214ENST00000572365 PTPRMP28827 1452 aa9.26□□□□□ -0.93
SF3B3-214ENST00000572365 PTK2Q05397 1052 aa9.25□□□□□ -0.93
SF3B3-214ENST00000572365 PTCRAQ6ISU1 281 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-214ENST00000572365 NKX2-3Q8TAU0 364 aa9.25□□□□□ -0.93
SF3B3-214ENST00000572365 OCSTAMPQ9BR26 566 aa9.25□□□□□ -0.93
SF3B3-214ENST00000572365 UNC93B1Q9H1C4 597 aa9.25□□□□□ -0.93
SF3B3-214ENST00000572365 PALM3A6NDB9 673 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-214ENST00000572365 RNF166Q96A37 237 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-214ENST00000572365 KIAA0586Q9BVV6 1533 aa9.23□□□□□ -0.93
SF3B3-214ENST00000572365 S1PR4O95977 384 aa9.23□□□□□ -0.93
SF3B3-214ENST00000572365 SRPK2P78362 688 aaKnown RBP9.23□□□□□ -0.93
SF3B3-214ENST00000572365 CCDC24Q8N4L8 307 aa9.23□□□□□ -0.93
SF3B3-214ENST00000572365 PBXIP1Q96AQ6 731 aa9.23□□□□□ -0.93
SF3B3-214ENST00000572365 HCSTQ9UBK5 93 aa9.23□□□□□ -0.93
SF3B3-214ENST00000572365 RAPGEF3O95398 923 aa9.22□□□□□ -0.93
SF3B3-214ENST00000572365 ITGBL1O95965 494 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-214ENST00000572365 SH3BP5LQ7L8J4 393 aa9.22□□□□□ -0.93
SF3B3-214ENST00000572365 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
SF3B3-214ENST00000572365 TFIP11Q9UBB9 837 aaKnown RBP9.22□□□□□ -0.93
SF3B3-214ENST00000572365 TNIKQ9UKE5 1360 aa9.22□□□□□ -0.93
SF3B3-214ENST00000572365 TEX14Q8IWB6 1497 aa9.21□□□□□ -0.93
SF3B3-214ENST00000572365 FCF1Q9Y324 198 aaKnown RBP9.21□□□□□ -0.94
SF3B3-214ENST00000572365 SPATA31D1Q6ZQQ2 1576 aa9.2□□□□□ -0.94
SF3B3-214ENST00000572365 ZCCHC11Q5TAX3 1644 aaKnown RBP9.2□□□□□ -0.94
SF3B3-214ENST00000572365 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
SF3B3-214ENST00000572365 PDIA4P13667 645 aaKnown RBP9.2□□□□□ -0.94
SF3B3-214ENST00000572365 MCCD1P59942 119 aaPredicted RBP9.2□□□□□ -0.94
SF3B3-214ENST00000572365 TBC1D9Q6ZT07 1266 aa9.2□□□□□ -0.94
SF3B3-214ENST00000572365 NFATC2IPQ8NCF5 419 aa9.2□□□□□ -0.94
SF3B3-214ENST00000572365 MAFBQ9Y5Q3 323 aaPredicted RBP9.2□□□□□ -0.94
SF3B3-214ENST00000572365 CD109Q6YHK3 1445 aa9.2□□□□□ -0.94
SF3B3-214ENST00000572365 UACAQ9BZF9 1416 aa9.2□□□□□ -0.94
SF3B3-214ENST00000572365 PCF11O94913 1555 aaKnown RBP9.2□□□□□ -0.94
SF3B3-214ENST00000572365 ADAMTSL3P82987 1691 aa9.2□□□□□ -0.94
SF3B3-214ENST00000572365 ATP9BO43861 1147 aa9.19□□□□□ -0.94
SF3B3-214ENST00000572365 LMOD1P29536 600 aaPredicted RBP9.19□□□□□ -0.94
SF3B3-214ENST00000572365 KCNC4Q03721 635 aa9.19□□□□□ -0.94
SF3B3-214ENST00000572365 SH3RF1Q7Z6J0 888 aa9.19□□□□□ -0.94
SF3B3-214ENST00000572365 ARHGAP9Q9BRR9 750 aa9.19□□□□□ -0.94
SF3B3-214ENST00000572365 ACIN1Q9UKV3 1341 aaKnown RBP9.19□□□□□ -0.94
SF3B3-214ENST00000572365 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.18□□□□□ -0.94
SF3B3-214ENST00000572365 RFX1P22670 979 aa9.18□□□□□ -0.94
SF3B3-214ENST00000572365 MLECQ14165 292 aa9.18□□□□□ -0.94
SF3B3-214ENST00000572365 RETREG2Q8NC44 543 aa9.18□□□□□ -0.94
SF3B3-214ENST00000572365 ADAM32Q8TC27 787 aa9.18□□□□□ -0.94
SF3B3-214ENST00000572365 MADDQ8WXG6 1647 aa9.18□□□□□ -0.94
SF3B3-214ENST00000572365 RIMS1Q86UR5 1692 aaKnown RBP9.17□□□□□ -0.94
SF3B3-214ENST00000572365 IGF1RP08069 1367 aa9.17□□□□□ -0.94
SF3B3-214ENST00000572365 TRAIPQ9BWF2 469 aa9.17□□□□□ -0.94
SF3B3-214ENST00000572365 CEP126Q9P2H0 1117 aa9.17□□□□□ -0.94
SF3B3-214ENST00000572365 CARMIL2Q6F5E8 1435 aa9.16□□□□□ -0.94
SF3B3-214ENST00000572365 PIK3CDO00329 1044 aa9.16□□□□□ -0.94
SF3B3-214ENST00000572365 ZBTB33Q86T24 672 aa9.16□□□□□ -0.94
SF3B3-214ENST00000572365 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
SF3B3-214ENST00000572365 BAP1Q92560 729 aa9.16□□□□□ -0.94
SF3B3-214ENST00000572365 PCDHB9Q9Y5E1 797 aa9.16□□□□□ -0.94
SF3B3-214ENST00000572365 BPHLQ86WA6 291 aaPredicted RBP9.15□□□□□ -0.94
SF3B3-214ENST00000572365 PHTF2Q8N3S3 785 aa9.15□□□□□ -0.94
SF3B3-214ENST00000572365 RNF223E7ERA6 249 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms