RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 AATKQ6ZMQ8 1374 aa16.37■□□□□ 0.21
TRIM25-205ENST00000572021 EVA1CP58658 441 aa16.37■□□□□ 0.21
TRIM25-205ENST00000572021 VPS72Q15906 364 aa16.37■□□□□ 0.21
TRIM25-205ENST00000572021 COL5A2P05997 1499 aaPredicted RBP16.35■□□□□ 0.21
TRIM25-205ENST00000572021 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
TRIM25-205ENST00000572021 RRS1Q15050 365 aaKnown RBP16.35■□□□□ 0.21
TRIM25-205ENST00000572021 LARP1Q6PKG0 1096 aaKnown RBP16.35■□□□□ 0.21
TRIM25-205ENST00000572021 USP35Q9P2H5 1018 aa16.35■□□□□ 0.21
TRIM25-205ENST00000572021 RGS12O14924 1447 aa16.35■□□□□ 0.21
TRIM25-205ENST00000572021 TNNT2P45379 298 aaPredicted RBP16.34■□□□□ 0.21
TRIM25-205ENST00000572021 KNSTRNQ9Y448 316 aa16.34■□□□□ 0.21
TRIM25-205ENST00000572021 ANKRD26Q9UPS8 1709 aa16.34■□□□□ 0.21
TRIM25-205ENST00000572021 MAP3K19Q56UN5 1328 aa16.34■□□□□ 0.21
TRIM25-205ENST00000572021 SPATA31A5Q5VU36 1347 aa16.33■□□□□ 0.2
TRIM25-205ENST00000572021 SPATA31A7Q8IWB4 1347 aa16.33■□□□□ 0.2
TRIM25-205ENST00000572021 FAM98CQ17RN3 349 aaKnown RBP16.32■□□□□ 0.2
TRIM25-205ENST00000572021 PER1O15534 1290 aaPredicted RBP16.31■□□□□ 0.2
TRIM25-205ENST00000572021 PEAK1Q9H792 1746 aa16.3■□□□□ 0.2
TRIM25-205ENST00000572021 SPATA31A1Q5TZJ5 1347 aa16.3■□□□□ 0.2
TRIM25-205ENST00000572021 A0A0G2JS52 829 aa16.3■□□□□ 0.2
TRIM25-205ENST00000572021 AMPHP49418 695 aa16.3■□□□□ 0.2
TRIM25-205ENST00000572021 MYT1Q01538 1121 aa16.3■□□□□ 0.2
TRIM25-205ENST00000572021 AMER1Q5JTC6 1135 aaPredicted RBP16.3■□□□□ 0.2
TRIM25-205ENST00000572021 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
TRIM25-205ENST00000572021 CDK12Q9NYV4 1490 aaPredicted RBP16.3■□□□□ 0.2
TRIM25-205ENST00000572021 CSB-PGBD3P0DP91 1061 aa16.3■□□□□ 0.2
TRIM25-205ENST00000572021 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
TRIM25-205ENST00000572021 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
TRIM25-205ENST00000572021 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
TRIM25-205ENST00000572021 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
TRIM25-205ENST00000572021 PPM1GO15355 546 aaPredicted RBP16.29■□□□□ 0.2
TRIM25-205ENST00000572021 HOXC9P31274 260 aa16.29■□□□□ 0.2
TRIM25-205ENST00000572021 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
TRIM25-205ENST00000572021 IP6K1Q92551 441 aa16.29■□□□□ 0.2
TRIM25-205ENST00000572021 WDR17Q8IZU2 1322 aa16.28■□□□□ 0.2
TRIM25-205ENST00000572021 MORC1Q86VD1 984 aa16.28■□□□□ 0.2
TRIM25-205ENST00000572021 SEPT12Q8IYM1 358 aa16.28■□□□□ 0.2
TRIM25-205ENST00000572021 ANKRD24Q8TF21 1146 aa16.28■□□□□ 0.2
TRIM25-205ENST00000572021 ABCC6O95255 1503 aa16.28■□□□□ 0.2
TRIM25-205ENST00000572021 CRB1P82279 1406 aa16.28■□□□□ 0.2
TRIM25-205ENST00000572021 DIEXFQ68CQ4 756 aaKnown RBP16.27■□□□□ 0.2
TRIM25-205ENST00000572021 NSD2O96028 1365 aa16.27■□□□□ 0.19
TRIM25-205ENST00000572021 RGPD2P0DJD1 1756 aa16.26■□□□□ 0.19
TRIM25-205ENST00000572021 ERBB3P21860 1342 aa16.26■□□□□ 0.19
TRIM25-205ENST00000572021 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
TRIM25-205ENST00000572021 NLRP2Q9NX02 1062 aa16.26■□□□□ 0.19
TRIM25-205ENST00000572021 TCP11L2Q8N4U5 519 aa16.25■□□□□ 0.19
TRIM25-205ENST00000572021 POLKQ9UBT6 870 aa16.25■□□□□ 0.19
TRIM25-205ENST00000572021 BLMP54132 1417 aaPredicted RBP16.25■□□□□ 0.19
TRIM25-205ENST00000572021 ONECUT3O60422 494 aaPredicted RBP16.24■□□□□ 0.19
TRIM25-205ENST00000572021 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
TRIM25-205ENST00000572021 THSD7AQ9UPZ6 1657 aa16.24■□□□□ 0.19
TRIM25-205ENST00000572021 RTL1A6NKG5 1358 aa16.24■□□□□ 0.19
TRIM25-205ENST00000572021 FLT4P35916 1363 aa16.23■□□□□ 0.19
TRIM25-205ENST00000572021 EP400Q96L91 3159 aa16.23■□□□□ 0.19
TRIM25-205ENST00000572021 SOCS7O14512 581 aa16.22■□□□□ 0.19
TRIM25-205ENST00000572021 CARD10Q9BWT7 1032 aa16.22■□□□□ 0.19
TRIM25-205ENST00000572021 FAM182BQ5T319 152 aa16.21■□□□□ 0.19
TRIM25-205ENST00000572021 BARGINQ6ZT62 677 aa16.21■□□□□ 0.19
TRIM25-205ENST00000572021 WNK3Q9BYP7 1800 aa16.21■□□□□ 0.19
TRIM25-205ENST00000572021 USHBP1Q8N6Y0 703 aa16.21■□□□□ 0.18
TRIM25-205ENST00000572021 INSRP06213 1382 aa16.2■□□□□ 0.18
TRIM25-205ENST00000572021 THRAP3Q9Y2W1 955 aaKnown RBP16.2■□□□□ 0.18
TRIM25-205ENST00000572021 KRT27Q7Z3Y8 459 aa16.19■□□□□ 0.18
TRIM25-205ENST00000572021 FAM208AQ9UK61 1670 aaKnown RBP16.19■□□□□ 0.18
TRIM25-205ENST00000572021 NBPF6Q5VWK0 638 aa16.18■□□□□ 0.18
TRIM25-205ENST00000572021 NBPF4Q96M43 638 aa16.18■□□□□ 0.18
TRIM25-205ENST00000572021 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
TRIM25-205ENST00000572021 NPC1L1Q9UHC9 1359 aa16.18■□□□□ 0.18
TRIM25-205ENST00000572021 SMG6Q86US8 1419 aaKnown RBP16.17■□□□□ 0.18
TRIM25-205ENST00000572021 PARP4Q9UKK3 1724 aaKnown RBP16.17■□□□□ 0.18
TRIM25-205ENST00000572021 LRRC37A3O60309 1634 aa16.17■□□□□ 0.18
TRIM25-205ENST00000572021 DISP2A7MBM2 1401 aa16.16■□□□□ 0.18
TRIM25-205ENST00000572021 MTHFSP49914 203 aa16.16■□□□□ 0.18
TRIM25-205ENST00000572021 EIF4A2Q14240 407 aaKnown RBP16.15■□□□□ 0.18
TRIM25-205ENST00000572021 PDE3BQ13370 1112 aa16.14■□□□□ 0.17
TRIM25-205ENST00000572021 DDB1Q16531 1140 aa16.14■□□□□ 0.17
TRIM25-205ENST00000572021 IL2RBP14784 551 aa16.13■□□□□ 0.17
TRIM25-205ENST00000572021 UPF1Q92900 1129 aaKnown RBP eCLIP16.13■□□□□ 0.176e-8■■■□□ 16.4
TRIM25-205ENST00000572021 EYA1Q99502 592 aa16.13■□□□□ 0.17
TRIM25-205ENST00000572021 MEGF6O75095 1541 aa16.12■□□□□ 0.17
TRIM25-205ENST00000572021 CDCA7Q9BWT1 371 aaPredicted RBP16.11■□□□□ 0.17
TRIM25-205ENST00000572021 EXOC5O00471 708 aa16.1■□□□□ 0.17
TRIM25-205ENST00000572021 MARCH10Q8NA82 808 aaPredicted RBP16.1■□□□□ 0.17
TRIM25-205ENST00000572021 TNS2Q63HR2 1409 aa16.09■□□□□ 0.17
TRIM25-205ENST00000572021 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
TRIM25-205ENST00000572021 IL13P35225 146 aa16.08■□□□□ 0.16
TRIM25-205ENST00000572021 DDX54Q8TDD1 881 aaKnown RBP16.08■□□□□ 0.16
TRIM25-205ENST00000572021 RAPGEF4Q8WZA2 1011 aa16.08■□□□□ 0.16
TRIM25-205ENST00000572021 SHANK3Q9BYB0 1731 aa16.07■□□□□ 0.16
TRIM25-205ENST00000572021 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
TRIM25-205ENST00000572021 AEBP1Q8IUX7 1158 aa16.07■□□□□ 0.16
TRIM25-205ENST00000572021 OVOS2A0A0G2JMS6 1433 aa16.07■□□□□ 0.16
TRIM25-205ENST00000572021 NCAPD2Q15021 1401 aa16.07■□□□□ 0.16
TRIM25-205ENST00000572021 IGSF1Q8N6C5 1336 aa16.06■□□□□ 0.16
TRIM25-205ENST00000572021 TRIM37O94972 964 aa16.06■□□□□ 0.16
TRIM25-205ENST00000572021 TATP17735 454 aaPredicted RBP16.06■□□□□ 0.16
TRIM25-205ENST00000572021 FAM196AQ6ZSG2 479 aa16.06■□□□□ 0.16
TRIM25-205ENST00000572021 RGPD1P0DJD0 1748 aa16.06■□□□□ 0.16
TRIM25-205ENST00000572021 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms