RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 TRMT44Q8IYL2 757 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-205ENST00000571562 PLPP7Q8NBV4 271 aa7.72□□□□□ -1.17
NPLOC4-205ENST00000571562 NFATC2IPQ8NCF5 419 aa7.72□□□□□ -1.17
NPLOC4-205ENST00000571562 EHBP1Q8NDI1 1231 aa7.72□□□□□ -1.17
NPLOC4-205ENST00000571562 ZNF592Q92610 1267 aa7.72□□□□□ -1.17
NPLOC4-205ENST00000571562 A0A0G2JS52 829 aa7.71□□□□□ -1.18
NPLOC4-205ENST00000571562 NBPF20Q3BBV1 942 aa7.71□□□□□ -1.18
NPLOC4-205ENST00000571562 IFFO2Q5TF58 517 aa7.71□□□□□ -1.18
NPLOC4-205ENST00000571562 PHTF2Q8N3S3 785 aa7.71□□□□□ -1.18
NPLOC4-205ENST00000571562 PPP1R15AO75807 674 aaPredicted RBP7.7□□□□□ -1.18
NPLOC4-205ENST00000571562 TSGA10IPQ3SY00 556 aa7.7□□□□□ -1.18
NPLOC4-205ENST00000571562 RC3H1Q5TC82 1133 aaKnown RBP7.7□□□□□ -1.18
NPLOC4-205ENST00000571562 ESPNB1AK53 854 aa7.69□□□□□ -1.18
NPLOC4-205ENST00000571562 FSHRP23945 695 aa7.69□□□□□ -1.18
NPLOC4-205ENST00000571562 VARSP26640 1264 aaKnown RBP7.69□□□□□ -1.18
NPLOC4-205ENST00000571562 SLC19A1P41440 591 aa7.69□□□□□ -1.18
NPLOC4-205ENST00000571562 MCCD1P59942 119 aaPredicted RBP7.69□□□□□ -1.18
NPLOC4-205ENST00000571562 OXLD1Q5BKU9 147 aa7.69□□□□□ -1.18
NPLOC4-205ENST00000571562 TRAF7Q6Q0C0 670 aa7.69□□□□□ -1.18
NPLOC4-205ENST00000571562 PLEKHM2Q8IWE5 1019 aa7.69□□□□□ -1.18
NPLOC4-205ENST00000571562 CHIC2Q9UKJ5 165 aa7.69□□□□□ -1.18
NPLOC4-205ENST00000571562 DOLKQ9UPQ8 538 aa7.69□□□□□ -1.18
NPLOC4-205ENST00000571562 ARID5BQ14865 1188 aa7.68□□□□□ -1.18
NPLOC4-205ENST00000571562 INTS6LQ5JSJ4 861 aaKnown RBP7.68□□□□□ -1.18
NPLOC4-205ENST00000571562 KANK4Q5T7N3 995 aaPredicted RBP7.68□□□□□ -1.18
NPLOC4-205ENST00000571562 VASH1Q7L8A9 365 aaPredicted RBP7.68□□□□□ -1.18
NPLOC4-205ENST00000571562 KCTD15Q96SI1 283 aaPredicted RBP7.68□□□□□ -1.18
NPLOC4-205ENST00000571562 CDCA7Q9BWT1 371 aaPredicted RBP7.68□□□□□ -1.18
NPLOC4-205ENST00000571562 CARNS1A5YM72 827 aa7.67□□□□□ -1.18
NPLOC4-205ENST00000571562 CD2BP2O95400 341 aaKnown RBP7.67□□□□□ -1.18
NPLOC4-205ENST00000571562 MAP4K5Q9Y4K4 846 aa7.67□□□□□ -1.18
NPLOC4-205ENST00000571562 PCDHB11Q9Y5F2 797 aa7.67□□□□□ -1.18
NPLOC4-205ENST00000571562 CRTC2Q53ET0 693 aaPredicted RBP7.66□□□□□ -1.18
NPLOC4-205ENST00000571562 ZNF697Q5TEC3 545 aa7.66□□□□□ -1.18
NPLOC4-205ENST00000571562 MRGPRX2Q96LB1 330 aa7.66□□□□□ -1.18
NPLOC4-205ENST00000571562 CDV3Q9UKY7 258 aaKnown RBP7.66□□□□□ -1.18
NPLOC4-205ENST00000571562 ZMIZ1Q9ULJ6 1067 aa7.66□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L15C9J2P7 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L10C9JJH3 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L13C9JLJ4 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L12C9JPN9 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L11C9JVI0 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L21D6R901 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L18D6R9N7 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L22D6RA61 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L17D6RBQ6 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L19D6RCP7 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L20D6RJB6 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 WNT7AO00755 349 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 USP17L24Q0WX57 530 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 EML3Q32P44 896 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 SPRYD7Q5W111 196 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 STK32AQ8WU08 396 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 VRTNQ9H8Y1 702 aa7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 MKRN1Q9UHC7 482 aaKnown RBP7.65□□□□□ -1.18
NPLOC4-205ENST00000571562 SIAH2O43255 324 aa7.64□□□□□ -1.19
NPLOC4-205ENST00000571562 ATG7O95352 703 aa7.64□□□□□ -1.19
NPLOC4-205ENST00000571562 SCTRP47872 440 aa7.64□□□□□ -1.19
NPLOC4-205ENST00000571562 MAP7D1Q3KQU3 841 aa7.64□□□□□ -1.19
NPLOC4-205ENST00000571562 ZNF594Q96JF6 807 aaPredicted RBP7.64□□□□□ -1.19
NPLOC4-205ENST00000571562 PRKD2Q9BZL6 878 aa7.64□□□□□ -1.19
NPLOC4-205ENST00000571562 KIAA1024Q9UPX6 916 aa7.64□□□□□ -1.19
NPLOC4-205ENST00000571562 ERVH48-1M5A8F1 160 aa7.63□□□□□ -1.19
NPLOC4-205ENST00000571562 PDIA4P13667 645 aaKnown RBP7.63□□□□□ -1.19
NPLOC4-205ENST00000571562 CLDN10P78369 228 aa7.63□□□□□ -1.19
NPLOC4-205ENST00000571562 FOXC1Q12948 553 aa7.63□□□□□ -1.19
NPLOC4-205ENST00000571562 RNF20Q5VTR2 975 aa7.63□□□□□ -1.19
NPLOC4-205ENST00000571562 SEPT12Q8IYM1 358 aa7.63□□□□□ -1.19
NPLOC4-205ENST00000571562 CDK15Q96Q40 435 aa7.63□□□□□ -1.19
NPLOC4-205ENST00000571562 FAM196BA6NMK8 535 aa7.62□□□□□ -1.19
NPLOC4-205ENST00000571562 ATP5J2-PTCD1G3V325 749 aa7.62□□□□□ -1.19
NPLOC4-205ENST00000571562 ADH1CP00326 375 aa7.62□□□□□ -1.19
NPLOC4-205ENST00000571562 NR3C2P08235 984 aa7.62□□□□□ -1.19
NPLOC4-205ENST00000571562 CSB-PGBD3P0DP91 1061 aa7.62□□□□□ -1.19
NPLOC4-205ENST00000571562 RASA1P20936 1047 aa7.62□□□□□ -1.19
NPLOC4-205ENST00000571562 OGFOD1Q8N543 542 aa7.62□□□□□ -1.19
NPLOC4-205ENST00000571562 TMPRSS4Q9NRS4 437 aa7.62□□□□□ -1.19
NPLOC4-205ENST00000571562 PKD2L1Q9P0L9 805 aa7.62□□□□□ -1.19
NPLOC4-205ENST00000571562 NOVA2Q9UNW9 492 aaKnown RBP7.62□□□□□ -1.19
NPLOC4-205ENST00000571562 GRM5P41594 1212 aa7.61□□□□□ -1.19
NPLOC4-205ENST00000571562 GTF2IP78347 998 aa7.61□□□□□ -1.19
NPLOC4-205ENST00000571562 PTK7Q13308 1070 aa7.61□□□□□ -1.19
NPLOC4-205ENST00000571562 TMEM164Q5U3C3 297 aa7.61□□□□□ -1.19
NPLOC4-205ENST00000571562 ZNF598Q86UK7 904 aaKnown RBP7.61□□□□□ -1.19
NPLOC4-205ENST00000571562 CYLDQ9NQC7 956 aa7.61□□□□□ -1.19
NPLOC4-205ENST00000571562 NOD1Q9Y239 953 aa7.61□□□□□ -1.19
NPLOC4-205ENST00000571562 TMEM88BA6NKF7 163 aa7.6□□□□□ -1.19
NPLOC4-205ENST00000571562 TNFRSF10AO00220 468 aa7.6□□□□□ -1.19
NPLOC4-205ENST00000571562 ZNF784Q8NCA9 323 aaPredicted RBP7.6□□□□□ -1.19
NPLOC4-205ENST00000571562 TRAIPQ9BWF2 469 aa7.6□□□□□ -1.19
NPLOC4-205ENST00000571562 USTQ9Y2C2 406 aa7.6□□□□□ -1.19
NPLOC4-205ENST00000571562 ACIN1Q9UKV3 1341 aaKnown RBP7.59□□□□□ -1.19
NPLOC4-205ENST00000571562 LZTS3O60299 673 aaPredicted RBP7.59□□□□□ -1.19
NPLOC4-205ENST00000571562 ALDH1A1P00352 501 aa7.59□□□□□ -1.19
NPLOC4-205ENST00000571562 CCDC116Q8IYX3 515 aa7.59□□□□□ -1.19
NPLOC4-205ENST00000571562 V9GY48 417 aaPredicted RBP7.59□□□□□ -1.19
NPLOC4-205ENST00000571562 STAU1O95793 577 aaKnown RBP7.58□□□□□ -1.2
NPLOC4-205ENST00000571562 ERVK-9P63128 1117 aa7.58□□□□□ -1.2
NPLOC4-205ENST00000571562 PSME1Q06323 249 aa7.58□□□□□ -1.2
NPLOC4-205ENST00000571562 DPYDQ12882 1025 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms