RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 AEBP2Q6ZN18 517 aaPredicted RBP19.28■□□□□ 0.68
NPLOC4-205ENST00000571562 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
NPLOC4-205ENST00000571562 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
NPLOC4-205ENST00000571562 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
NPLOC4-205ENST00000571562 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
NPLOC4-205ENST00000571562 FOXD1Q16676 465 aa15.07■□□□□ 0
NPLOC4-205ENST00000571562 ADRA2BP18089 450 aa14.74□□□□□ -0.05
NPLOC4-205ENST00000571562 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
NPLOC4-205ENST00000571562 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
NPLOC4-205ENST00000571562 KCNA4P22459 653 aa13.85□□□□□ -0.19
NPLOC4-205ENST00000571562 PPP4R3CPQ6ZMV5 832 aa13.78□□□□□ -0.2
NPLOC4-205ENST00000571562 MSH5O43196 834 aa13.71□□□□□ -0.21
NPLOC4-205ENST00000571562 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
NPLOC4-205ENST00000571562 SCAF1Q9H7N4 1312 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-205ENST00000571562 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-205ENST00000571562 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
NPLOC4-205ENST00000571562 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
NPLOC4-205ENST00000571562 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
NPLOC4-205ENST00000571562 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-205ENST00000571562 DMRT2Q9Y5R5 561 aa13.01□□□□□ -0.33
NPLOC4-205ENST00000571562 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
NPLOC4-205ENST00000571562 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
NPLOC4-205ENST00000571562 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-205ENST00000571562 ZBTB22O15209 634 aa12.79□□□□□ -0.36
NPLOC4-205ENST00000571562 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
NPLOC4-205ENST00000571562 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
NPLOC4-205ENST00000571562 SLC4A2P04920 1241 aa12.53□□□□□ -0.4
NPLOC4-205ENST00000571562 DCAF8L1A6NGE4 600 aa12.47□□□□□ -0.41
NPLOC4-205ENST00000571562 MYCNP04198 464 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-205ENST00000571562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.24□□□□□ -0.454e-9■□□□□ 8.3
NPLOC4-205ENST00000571562 U3KPZ7 1027 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-205ENST00000571562 ATXN8OSP0DMR3 200 aa12.06□□□□□ -0.48
NPLOC4-205ENST00000571562 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
NPLOC4-205ENST00000571562 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
NPLOC4-205ENST00000571562 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-205ENST00000571562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-205ENST00000571562 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-205ENST00000571562 RNF39Q9H2S5 420 aa11.82□□□□□ -0.52
NPLOC4-205ENST00000571562 APLP2Q06481 763 aa11.74□□□□□ -0.53
NPLOC4-205ENST00000571562 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-205ENST00000571562 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-205ENST00000571562 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-205ENST00000571562 FKBP8Q14318 412 aa11.65□□□□□ -0.54
NPLOC4-205ENST00000571562 C1QBPQ07021 282 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-205ENST00000571562 CAPN15O75808 1086 aa11.62□□□□□ -0.55
NPLOC4-205ENST00000571562 POLA2Q14181 598 aa11.49□□□□□ -0.57
NPLOC4-205ENST00000571562 ABCB7O75027 752 aa11.48□□□□□ -0.57
NPLOC4-205ENST00000571562 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-205ENST00000571562 FBLN2P98095 1184 aa11.38□□□□□ -0.59
NPLOC4-205ENST00000571562 DSG3P32926 999 aa11.35□□□□□ -0.59
NPLOC4-205ENST00000571562 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
NPLOC4-205ENST00000571562 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-205ENST00000571562 ZBTB12Q9Y330 459 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-205ENST00000571562 OSCARQ8IYS5 282 aa11.18□□□□□ -0.62
NPLOC4-205ENST00000571562 PROM2Q8N271 834 aa11.17□□□□□ -0.62
NPLOC4-205ENST00000571562 RTN4Q9NQC3 1192 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-205ENST00000571562 AMER1Q5JTC6 1135 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-205ENST00000571562 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
NPLOC4-205ENST00000571562 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
NPLOC4-205ENST00000571562 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
NPLOC4-205ENST00000571562 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
NPLOC4-205ENST00000571562 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-205ENST00000571562 SSUH2Q9Y2M2 353 aa11.01□□□□□ -0.65
NPLOC4-205ENST00000571562 VASPP50552 380 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-205ENST00000571562 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
NPLOC4-205ENST00000571562 IFNLR1Q8IU57 520 aaPredicted RBP10.86□□□□□ -0.67
NPLOC4-205ENST00000571562 RBM42Q9BTD8 480 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-205ENST00000571562 STAG3Q9UJ98 1225 aa10.75□□□□□ -0.69
NPLOC4-205ENST00000571562 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
NPLOC4-205ENST00000571562 KLHL34Q8N239 644 aa10.68□□□□□ -0.7
NPLOC4-205ENST00000571562 AKT1S1Q96B36 256 aa10.68□□□□□ -0.7
NPLOC4-205ENST00000571562 MIER1Q8N108 512 aa10.66□□□□□ -0.7
NPLOC4-205ENST00000571562 REM2Q8IYK8 340 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-205ENST00000571562 SPDYE1Q8NFV5 336 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-205ENST00000571562 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
NPLOC4-205ENST00000571562 PKD2Q13563 968 aa10.61□□□□□ -0.71
NPLOC4-205ENST00000571562 CLEC11AQ9Y240 323 aa10.61□□□□□ -0.71
NPLOC4-205ENST00000571562 PITPNM1O00562 1244 aa10.54□□□□□ -0.72
NPLOC4-205ENST00000571562 PLEKHG5O94827 1062 aa10.54□□□□□ -0.72
NPLOC4-205ENST00000571562 SLC24A1O60721 1099 aa10.52□□□□□ -0.73
NPLOC4-205ENST00000571562 DCAF8L2P0C7V8 631 aa10.5□□□□□ -0.73
NPLOC4-205ENST00000571562 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
NPLOC4-205ENST00000571562 ZBTB47Q9UFB7 747 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-205ENST00000571562 CREBZFQ9NS37 354 aa10.49□□□□□ -0.73
NPLOC4-205ENST00000571562 ECM2O94769 699 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-205ENST00000571562 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-205ENST00000571562 MNX1P50219 401 aaPredicted RBP10.43□□□□□ -0.74
NPLOC4-205ENST00000571562 RGL2O15211 777 aa10.41□□□□□ -0.74
NPLOC4-205ENST00000571562 NUBP1P53384 320 aa10.4□□□□□ -0.74
NPLOC4-205ENST00000571562 CHADLQ6NUI6 762 aa10.36□□□□□ -0.75
NPLOC4-205ENST00000571562 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
NPLOC4-205ENST00000571562 GSE1Q14687 1217 aa10.3□□□□□ -0.76
NPLOC4-205ENST00000571562 RNF25Q96BH1 459 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-205ENST00000571562 FAM212AQ96EL1 285 aa10.3□□□□□ -0.76
NPLOC4-205ENST00000571562 NPM1P06748 294 aaKnown RBP eCLIP10.29□□□□□ -0.76
NPLOC4-205ENST00000571562 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
NPLOC4-205ENST00000571562 PLCB2Q00722 1185 aa10.28□□□□□ -0.76
NPLOC4-205ENST00000571562 TRIM41Q8WV44 630 aa10.27□□□□□ -0.77
NPLOC4-205ENST00000571562 PRKAR2AP13861 404 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-205ENST00000571562 CHRDL2Q6WN34 429 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms