RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PEAK1Q9H792 1746 aa19.3■□□□□ 0.68
RPAIN-209ENST00000571558 USP47Q96K76 1375 aa19.28■□□□□ 0.68
RPAIN-209ENST00000571558 EIF4G2P78344 907 aaKnown RBP eCLIP19.27■□□□□ 0.68
RPAIN-209ENST00000571558 ANO8Q9HCE9 1232 aaPredicted RBP19.27■□□□□ 0.68
RPAIN-209ENST00000571558 CASZ1Q86V15 1759 aa19.27■□□□□ 0.68
RPAIN-209ENST00000571558 HSPA5P11021 654 aaKnown RBP19.26■□□□□ 0.67
RPAIN-209ENST00000571558 TOM1L2Q6ZVM7 507 aa19.26■□□□□ 0.67
RPAIN-209ENST00000571558 PPIP5K1Q6PFW1 1433 aa19.26■□□□□ 0.67
RPAIN-209ENST00000571558 PTGER2P43116 358 aa19.25■□□□□ 0.67
RPAIN-209ENST00000571558 SRPK2P78362 688 aaKnown RBP19.25■□□□□ 0.67
RPAIN-209ENST00000571558 PROM2Q8N271 834 aa19.25■□□□□ 0.67
RPAIN-209ENST00000571558 ZNF784Q8NCA9 323 aaPredicted RBP19.25■□□□□ 0.67
RPAIN-209ENST00000571558 NLRP6P59044 892 aa19.25■□□□□ 0.67
RPAIN-209ENST00000571558 WDR17Q8IZU2 1322 aa19.24■□□□□ 0.67
RPAIN-209ENST00000571558 LRRC37A3O60309 1634 aa19.24■□□□□ 0.67
RPAIN-209ENST00000571558 SBF2Q86WG5 1849 aa19.24■□□□□ 0.67
RPAIN-209ENST00000571558 STK32BQ9NY57 414 aa19.24■□□□□ 0.67
RPAIN-209ENST00000571558 ZBTB7AO95365 584 aa19.23■□□□□ 0.67
RPAIN-209ENST00000571558 SLIT3O75094 1523 aa19.23■□□□□ 0.67
RPAIN-209ENST00000571558 USP6P35125 1406 aa19.22■□□□□ 0.67
RPAIN-209ENST00000571558 SLC15A2Q16348 729 aa19.22■□□□□ 0.67
RPAIN-209ENST00000571558 MARCH10Q8NA82 808 aaPredicted RBP19.22■□□□□ 0.67
RPAIN-209ENST00000571558 SYT17Q9BSW7 474 aa19.22■□□□□ 0.67
RPAIN-209ENST00000571558 TXNRD1Q16881 649 aa19.21■□□□□ 0.67
RPAIN-209ENST00000571558 MTFR1LQ9H019 292 aa19.21■□□□□ 0.67
RPAIN-209ENST00000571558 CENPJQ9HC77 1338 aaPredicted RBP19.21■□□□□ 0.67
RPAIN-209ENST00000571558 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
RPAIN-209ENST00000571558 CARD10Q9BWT7 1032 aa19.2■□□□□ 0.66
RPAIN-209ENST00000571558 PDGFDQ9GZP0 370 aaPredicted RBP19.2■□□□□ 0.66
RPAIN-209ENST00000571558 PTF1AQ7RTS3 328 aa19.19■□□□□ 0.66
RPAIN-209ENST00000571558 KCNH5Q8NCM2 988 aa19.19■□□□□ 0.66
RPAIN-209ENST00000571558 FHDC1Q9C0D6 1143 aaPredicted RBP19.19■□□□□ 0.66
RPAIN-209ENST00000571558 UTRNP46939 3433 aa19.19■□□□□ 0.66
RPAIN-209ENST00000571558 ZBTB7CA1YPR0 619 aa19.18■□□□□ 0.66
RPAIN-209ENST00000571558 EXOC5O00471 708 aa19.18■□□□□ 0.66
RPAIN-209ENST00000571558 CABP2Q9NPB3 220 aa19.18■□□□□ 0.66
RPAIN-209ENST00000571558 CABP1Q9NZU7 370 aa19.18■□□□□ 0.66
RPAIN-209ENST00000571558 ATF5Q9Y2D1 282 aaPredicted RBP19.18■□□□□ 0.66
RPAIN-209ENST00000571558 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
RPAIN-209ENST00000571558 ARHGEF25Q86VW2 580 aa19.17■□□□□ 0.66
RPAIN-209ENST00000571558 TESK2Q96S53 571 aa19.17■□□□□ 0.66
RPAIN-209ENST00000571558 ZNF316A6NFI3 1004 aaPredicted RBP19.17■□□□□ 0.66
RPAIN-209ENST00000571558 MYOM1P52179 1685 aa19.17■□□□□ 0.66
RPAIN-209ENST00000571558 CPSF1Q10570 1443 aaKnown RBP19.17■□□□□ 0.66
RPAIN-209ENST00000571558 SGIP1Q9BQI5 828 aa19.17■□□□□ 0.66
RPAIN-209ENST00000571558 COL18A1P39060 1754 aa19.16■□□□□ 0.66
RPAIN-209ENST00000571558 MAP3K5Q99683 1374 aa19.16■□□□□ 0.66
RPAIN-209ENST00000571558 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
RPAIN-209ENST00000571558 CCDC7Q96M83 1385 aa19.15■□□□□ 0.66
RPAIN-209ENST00000571558 SBNO2Q9Y2G9 1366 aa19.15■□□□□ 0.66
RPAIN-209ENST00000571558 C1QTNF8P60827 252 aa19.15■□□□□ 0.66
RPAIN-209ENST00000571558 AKAP12Q02952 1782 aa19.14■□□□□ 0.65
RPAIN-209ENST00000571558 WNK3Q9BYP7 1800 aa19.13■□□□□ 0.65
RPAIN-209ENST00000571558 CSB-PGBD3P0DP91 1061 aa19.13■□□□□ 0.65
RPAIN-209ENST00000571558 ARXQ96QS3 562 aa19.13■□□□□ 0.65
RPAIN-209ENST00000571558 SENP3-EIF4A1A0A087X0R7 540 aa19.12■□□□□ 0.65
RPAIN-209ENST00000571558 TTC21AQ8NDW8 1320 aa19.11■□□□□ 0.65
RPAIN-209ENST00000571558 QRICH2Q9H0J4 1663 aa19.11■□□□□ 0.65
RPAIN-209ENST00000571558 ABCC6O95255 1503 aa19.11■□□□□ 0.65
RPAIN-209ENST00000571558 EVC2Q86UK5 1308 aa19.11■□□□□ 0.65
RPAIN-209ENST00000571558 PIK3C2AO00443 1686 aa19.1■□□□□ 0.65
RPAIN-209ENST00000571558 TNS2Q63HR2 1409 aa19.1■□□□□ 0.65
RPAIN-209ENST00000571558 CHD4Q14839 1912 aa19.1■□□□□ 0.65
RPAIN-209ENST00000571558 TTC21BQ7Z4L5 1316 aa19.09■□□□□ 0.65
RPAIN-209ENST00000571558 SLC16A10Q8TF71 515 aa19.08■□□□□ 0.64
RPAIN-209ENST00000571558 WASHC2AQ641Q2 1341 aa19.07■□□□□ 0.64
RPAIN-209ENST00000571558 SLC24A1O60721 1099 aa19.06■□□□□ 0.64
RPAIN-209ENST00000571558 KIF7Q2M1P5 1343 aa19.05■□□□□ 0.64
RPAIN-209ENST00000571558 NHSQ6T4R5 1651 aa19.05■□□□□ 0.64
RPAIN-209ENST00000571558 TMF1P82094 1093 aa19.04■□□□□ 0.64
RPAIN-209ENST00000571558 GPR162Q16538 588 aa19.04■□□□□ 0.64
RPAIN-209ENST00000571558 NFAT5O94916 1531 aa19.03■□□□□ 0.64
RPAIN-209ENST00000571558 PAPPAQ13219 1627 aa19.02■□□□□ 0.64
RPAIN-209ENST00000571558 IL2RBP14784 551 aa19.02■□□□□ 0.64
RPAIN-209ENST00000571558 GIGYF1O75420 1035 aaPredicted RBP19.01■□□□□ 0.63
RPAIN-209ENST00000571558 POLD1P28340 1107 aa19.01■□□□□ 0.63
RPAIN-209ENST00000571558 SLC27A3Q5K4L6 730 aa19.01■□□□□ 0.63
RPAIN-209ENST00000571558 ERBB3P21860 1342 aa19.01■□□□□ 0.63
RPAIN-209ENST00000571558 RGPD5Q99666 1765 aa19■□□□□ 0.63
RPAIN-209ENST00000571558 SOX12O15370 315 aa19■□□□□ 0.63
RPAIN-209ENST00000571558 IFFO2Q5TF58 517 aa19■□□□□ 0.63
RPAIN-209ENST00000571558 ACSBG1Q96GR2 724 aa19■□□□□ 0.63
RPAIN-209ENST00000571558 NLRP2Q9NX02 1062 aa19■□□□□ 0.63
RPAIN-209ENST00000571558 USP31Q70CQ4 1352 aa18.99■□□□□ 0.63
RPAIN-209ENST00000571558 KTN1Q86UP2 1357 aaKnown RBP18.99■□□□□ 0.63
RPAIN-209ENST00000571558 ZNF827Q17R98 1081 aa18.98■□□□□ 0.63
RPAIN-209ENST00000571558 AKT1S1Q96B36 256 aa18.98■□□□□ 0.63
RPAIN-209ENST00000571558 PUS7Q96PZ0 661 aaKnown RBP18.98■□□□□ 0.63
RPAIN-209ENST00000571558 LRRC4BQ9NT99 713 aa18.98■□□□□ 0.63
RPAIN-209ENST00000571558 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
RPAIN-209ENST00000571558 BTAF1O14981 1849 aa18.95■□□□□ 0.62
RPAIN-209ENST00000571558 CEP350Q5VT06 3117 aa18.94■□□□□ 0.62
RPAIN-209ENST00000571558 GRIN3BO60391 1043 aa18.94■□□□□ 0.62
RPAIN-209ENST00000571558 GOLGB1Q14789 3259 aaKnown RBP18.94■□□□□ 0.62
RPAIN-209ENST00000571558 QSER1Q2KHR3 1735 aa18.93■□□□□ 0.62
RPAIN-209ENST00000571558 COL24A1Q17RW2 1714 aa18.93■□□□□ 0.62
RPAIN-209ENST00000571558 ANKRD24Q8TF21 1146 aa18.92■□□□□ 0.62
RPAIN-209ENST00000571558 TFCP2L1Q9NZI6 479 aa18.92■□□□□ 0.62
RPAIN-209ENST00000571558 PNPLA7Q6ZV29 1317 aa18.92■□□□□ 0.62
RPAIN-209ENST00000571558 HMGB2P26583 209 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms