RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ARHGEF28Q8N1W1 1705 aaKnown RBP18.83■□□□□ 0.6
CCDC40-205ENST00000571028 PTGER2P43116 358 aa18.82■□□□□ 0.6
CCDC40-205ENST00000571028 SRPK2P78362 688 aaKnown RBP18.82■□□□□ 0.6
CCDC40-205ENST00000571028 CASZ1Q86V15 1759 aa18.82■□□□□ 0.6
CCDC40-205ENST00000571028 MYOM1P52179 1685 aa18.82■□□□□ 0.6
CCDC40-205ENST00000571028 C1QTNF8P60827 252 aa18.81■□□□□ 0.6
CCDC40-205ENST00000571028 SYT17Q9BSW7 474 aa18.81■□□□□ 0.6
CCDC40-205ENST00000571028 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
CCDC40-205ENST00000571028 TOPAZ1Q8N9V7 1692 aa18.81■□□□□ 0.6
CCDC40-205ENST00000571028 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
CCDC40-205ENST00000571028 PEAK1Q9H792 1746 aa18.8■□□□□ 0.6
CCDC40-205ENST00000571028 CDCA7Q9BWT1 371 aaPredicted RBP18.8■□□□□ 0.6
CCDC40-205ENST00000571028 MTFR1LQ9H019 292 aa18.8■□□□□ 0.6
CCDC40-205ENST00000571028 AATKQ6ZMQ8 1374 aa18.8■□□□□ 0.6
CCDC40-205ENST00000571028 NLRP6P59044 892 aa18.79■□□□□ 0.6
CCDC40-205ENST00000571028 SLC15A2Q16348 729 aa18.79■□□□□ 0.6
CCDC40-205ENST00000571028 TXNRD1Q16881 649 aa18.79■□□□□ 0.6
CCDC40-205ENST00000571028 PTF1AQ7RTS3 328 aa18.79■□□□□ 0.6
CCDC40-205ENST00000571028 PPIP5K1Q6PFW1 1433 aa18.79■□□□□ 0.6
CCDC40-205ENST00000571028 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
CCDC40-205ENST00000571028 PROM2Q8N271 834 aa18.78■□□□□ 0.6
CCDC40-205ENST00000571028 BRD4O60885 1362 aaPredicted RBP18.78■□□□□ 0.6
CCDC40-205ENST00000571028 CSB-PGBD3P0DP91 1061 aa18.77■□□□□ 0.6
CCDC40-205ENST00000571028 MARCH10Q8NA82 808 aaPredicted RBP18.77■□□□□ 0.6
CCDC40-205ENST00000571028 KIAA1210Q9ULL0 1709 aa18.77■□□□□ 0.59
CCDC40-205ENST00000571028 WDR17Q8IZU2 1322 aa18.75■□□□□ 0.59
CCDC40-205ENST00000571028 BCL9O00512 1426 aa18.74■□□□□ 0.59
CCDC40-205ENST00000571028 ARXQ96QS3 562 aa18.74■□□□□ 0.59
CCDC40-205ENST00000571028 UTRNP46939 3433 aa18.74■□□□□ 0.59
CCDC40-205ENST00000571028 EXOC5O00471 708 aa18.73■□□□□ 0.59
CCDC40-205ENST00000571028 GPR162Q16538 588 aa18.73■□□□□ 0.59
CCDC40-205ENST00000571028 CABP2Q9NPB3 220 aa18.73■□□□□ 0.59
CCDC40-205ENST00000571028 SBF2Q86WG5 1849 aa18.72■□□□□ 0.59
CCDC40-205ENST00000571028 GIGYF1O75420 1035 aaPredicted RBP18.72■□□□□ 0.59
CCDC40-205ENST00000571028 IFFO2Q5TF58 517 aa18.72■□□□□ 0.59
CCDC40-205ENST00000571028 USP6P35125 1406 aa18.71■□□□□ 0.59
CCDC40-205ENST00000571028 CENPJQ9HC77 1338 aaPredicted RBP18.71■□□□□ 0.59
CCDC40-205ENST00000571028 SLIT3O75094 1523 aa18.7■□□□□ 0.58
CCDC40-205ENST00000571028 KLHL34Q8N239 644 aa18.7■□□□□ 0.58
CCDC40-205ENST00000571028 CARD10Q9BWT7 1032 aa18.7■□□□□ 0.58
CCDC40-205ENST00000571028 CPSF1Q10570 1443 aaKnown RBP18.69■□□□□ 0.58
CCDC40-205ENST00000571028 SOX12O15370 315 aa18.69■□□□□ 0.58
CCDC40-205ENST00000571028 SGIP1Q9BQI5 828 aa18.69■□□□□ 0.58
CCDC40-205ENST00000571028 CABP1Q9NZU7 370 aa18.69■□□□□ 0.58
CCDC40-205ENST00000571028 AXIN2Q9Y2T1 843 aa18.69■□□□□ 0.58
CCDC40-205ENST00000571028 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
CCDC40-205ENST00000571028 PELP1Q8IZL8 1130 aaKnown RBP18.68■□□□□ 0.58
CCDC40-205ENST00000571028 KCNH5Q8NCM2 988 aa18.68■□□□□ 0.58
CCDC40-205ENST00000571028 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
CCDC40-205ENST00000571028 ACSBG1Q96GR2 724 aa18.66■□□□□ 0.58
CCDC40-205ENST00000571028 CCDC7Q96M83 1385 aa18.66■□□□□ 0.58
CCDC40-205ENST00000571028 TNS2Q63HR2 1409 aa18.66■□□□□ 0.58
CCDC40-205ENST00000571028 WNK3Q9BYP7 1800 aa18.65■□□□□ 0.58
CCDC40-205ENST00000571028 ARHGEF25Q86VW2 580 aa18.65■□□□□ 0.58
CCDC40-205ENST00000571028 ST20-MTHFSA0A0A6YYL1 179 aa18.64■□□□□ 0.57
CCDC40-205ENST00000571028 POLD1P28340 1107 aa18.64■□□□□ 0.57
CCDC40-205ENST00000571028 CHD4Q14839 1912 aa18.64■□□□□ 0.57
CCDC40-205ENST00000571028 USP47Q96K76 1375 aa18.64■□□□□ 0.57
CCDC40-205ENST00000571028 PIK3C2AO00443 1686 aa18.61■□□□□ 0.57
CCDC40-205ENST00000571028 QRICH2Q9H0J4 1663 aa18.61■□□□□ 0.57
CCDC40-205ENST00000571028 COL18A1P39060 1754 aa18.6■□□□□ 0.57
CCDC40-205ENST00000571028 ZNF827Q17R98 1081 aa18.6■□□□□ 0.57
CCDC40-205ENST00000571028 NHSQ6T4R5 1651 aa18.6■□□□□ 0.57
CCDC40-205ENST00000571028 TTC21BQ7Z4L5 1316 aa18.59■□□□□ 0.57
CCDC40-205ENST00000571028 EVC2Q86UK5 1308 aa18.59■□□□□ 0.57
CCDC40-205ENST00000571028 SLC16A10Q8TF71 515 aa18.59■□□□□ 0.57
CCDC40-205ENST00000571028 ZNF692Q9BU19 519 aaPredicted RBP18.59■□□□□ 0.57
CCDC40-205ENST00000571028 NLRP2Q9NX02 1062 aa18.59■□□□□ 0.57
CCDC40-205ENST00000571028 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.57
CCDC40-205ENST00000571028 HSPA5P11021 654 aaKnown RBP18.58■□□□□ 0.56
CCDC40-205ENST00000571028 EIF4G2P78344 907 aaKnown RBP eCLIP18.58■□□□□ 0.56
CCDC40-205ENST00000571028 ABCC6O95255 1503 aa18.58■□□□□ 0.56
CCDC40-205ENST00000571028 IL2RBP14784 551 aa18.57■□□□□ 0.56
CCDC40-205ENST00000571028 PAPPAQ13219 1627 aa18.56■□□□□ 0.56
CCDC40-205ENST00000571028 TFCP2L1Q9NZI6 479 aa18.55■□□□□ 0.56
CCDC40-205ENST00000571028 GRIN3BO60391 1043 aa18.54■□□□□ 0.56
CCDC40-205ENST00000571028 SLC27A3Q5K4L6 730 aa18.54■□□□□ 0.56
CCDC40-205ENST00000571028 LRRC4BQ9NT99 713 aa18.54■□□□□ 0.56
CCDC40-205ENST00000571028 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
CCDC40-205ENST00000571028 TESK2Q96S53 571 aa18.53■□□□□ 0.56
CCDC40-205ENST00000571028 POLR3GLQ9BT43 218 aa18.53■□□□□ 0.56
CCDC40-205ENST00000571028 ERBB3P21860 1342 aa18.52■□□□□ 0.56
CCDC40-205ENST00000571028 NLGN2Q8NFZ4 835 aa18.52■□□□□ 0.56
CCDC40-205ENST00000571028 AKT1S1Q96B36 256 aa18.52■□□□□ 0.56
CCDC40-205ENST00000571028 NFAT5O94916 1531 aa18.52■□□□□ 0.56
CCDC40-205ENST00000571028 KTN1Q86UP2 1357 aaKnown RBP18.52■□□□□ 0.55
CCDC40-205ENST00000571028 RGPD5Q99666 1765 aa18.51■□□□□ 0.55
CCDC40-205ENST00000571028 TMF1P82094 1093 aa18.51■□□□□ 0.55
CCDC40-205ENST00000571028 MSH5O43196 834 aa18.5■□□□□ 0.55
CCDC40-205ENST00000571028 SYTL4Q96C24 671 aaPredicted RBP18.5■□□□□ 0.55
CCDC40-205ENST00000571028 PNPLA7Q6ZV29 1317 aa18.49■□□□□ 0.55
CCDC40-205ENST00000571028 BTAF1O14981 1849 aa18.49■□□□□ 0.55
CCDC40-205ENST00000571028 CEP350Q5VT06 3117 aa18.49■□□□□ 0.55
CCDC40-205ENST00000571028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.49■□□□□ 0.55
CCDC40-205ENST00000571028 DDX54Q8TDD1 881 aaKnown RBP18.49■□□□□ 0.55
CCDC40-205ENST00000571028 TMC1Q8TDI8 760 aa18.49■□□□□ 0.55
CCDC40-205ENST00000571028 SHANK3Q9BYB0 1731 aa18.49■□□□□ 0.55
CCDC40-205ENST00000571028 SBNO2Q9Y2G9 1366 aa18.48■□□□□ 0.55
CCDC40-205ENST00000571028 ANKRD24Q8TF21 1146 aa18.48■□□□□ 0.55
CCDC40-205ENST00000571028 GOLGB1Q14789 3259 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms