RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 NUTM2GQ5VZR2 741 aa25.64■■□□□ 1.7
SPNS2-203ENST00000570979 PPIP5K1Q6PFW1 1433 aa25.64■■□□□ 1.7
SPNS2-203ENST00000570979 NWD2Q9ULI1 1742 aa25.64■■□□□ 1.69
SPNS2-203ENST00000570979 CCDC136Q96JN2 1154 aa25.64■■□□□ 1.69
SPNS2-203ENST00000570979 HDGFL2Q7Z4V5 671 aaPredicted RBP25.63■■□□□ 1.69
SPNS2-203ENST00000570979 ZNF521Q96K83 1311 aa25.62■■□□□ 1.69
SPNS2-203ENST00000570979 VPS72Q15906 364 aa25.61■■□□□ 1.69
SPNS2-203ENST00000570979 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.6■■□□□ 1.69
SPNS2-203ENST00000570979 CDCA7LQ96GN5 454 aa25.59■■□□□ 1.69
SPNS2-203ENST00000570979 CABP1Q9NZU7 370 aa25.59■■□□□ 1.69
SPNS2-203ENST00000570979 NRAPQ86VF7 1730 aa25.59■■□□□ 1.69
SPNS2-203ENST00000570979 BTG4Q9NY30 223 aa25.59■■□□□ 1.69
SPNS2-203ENST00000570979 B4GALNT3Q6L9W6 998 aa25.58■■□□□ 1.69
SPNS2-203ENST00000570979 COL14A1Q05707 1796 aaKnown RBP25.58■■□□□ 1.68
SPNS2-203ENST00000570979 PHRF1Q9P1Y6 1649 aaKnown RBP25.58■■□□□ 1.68
SPNS2-203ENST00000570979 E9PSI1 815 aa25.56■■□□□ 1.68
SPNS2-203ENST00000570979 CCDC9Q9Y3X0 531 aaKnown RBP25.56■■□□□ 1.68
SPNS2-203ENST00000570979 RUNDC1Q96C34 613 aa25.55■■□□□ 1.68
SPNS2-203ENST00000570979 A0A1W2PP64 1363 aa25.54■■□□□ 1.68
SPNS2-203ENST00000570979 KIAA0232Q92628 1395 aa25.54■■□□□ 1.68
SPNS2-203ENST00000570979 SENP3-EIF4A1A0A087X0R7 540 aa25.54■■□□□ 1.68
SPNS2-203ENST00000570979 SLFN5Q08AF3 891 aa25.54■■□□□ 1.68
SPNS2-203ENST00000570979 ABTB2Q8N961 1025 aa25.54■■□□□ 1.68
SPNS2-203ENST00000570979 PRDM11Q9NQV5 511 aa25.54■■□□□ 1.68
SPNS2-203ENST00000570979 EP400Q96L91 3159 aa25.54■■□□□ 1.68
SPNS2-203ENST00000570979 BRWD3Q6RI45 1802 aa25.54■■□□□ 1.68
SPNS2-203ENST00000570979 CHRNA2Q15822 529 aa25.54■■□□□ 1.68
SPNS2-203ENST00000570979 DUSP27Q5VZP5 1158 aa25.54■■□□□ 1.68
SPNS2-203ENST00000570979 APAF1O14727 1248 aa25.53■■□□□ 1.68
SPNS2-203ENST00000570979 ZC3H6P61129 1189 aaKnown RBP25.53■■□□□ 1.68
SPNS2-203ENST00000570979 MTHFSP49914 203 aa25.52■■□□□ 1.68
SPNS2-203ENST00000570979 TRMT2AQ8IZ69 625 aaKnown RBP25.52■■□□□ 1.68
SPNS2-203ENST00000570979 USP6P35125 1406 aa25.52■■□□□ 1.68
SPNS2-203ENST00000570979 SEPT12Q8IYM1 358 aa25.51■■□□□ 1.67
SPNS2-203ENST00000570979 USP19O94966 1318 aa25.51■■□□□ 1.67
SPNS2-203ENST00000570979 ANKRD26Q9UPS8 1709 aa25.5■■□□□ 1.67
SPNS2-203ENST00000570979 ONECUT3O60422 494 aaPredicted RBP25.5■■□□□ 1.67
SPNS2-203ENST00000570979 PNNQ9H307 717 aaKnown RBP25.5■■□□□ 1.67
SPNS2-203ENST00000570979 RBM19Q9Y4C8 960 aaKnown RBP25.49■■□□□ 1.67
SPNS2-203ENST00000570979 NRKQ7Z2Y5 1582 aa25.49■■□□□ 1.67
SPNS2-203ENST00000570979 SSH2Q76I76 1423 aa25.48■■□□□ 1.67
SPNS2-203ENST00000570979 CCDC146Q8IYE0 955 aa25.48■■□□□ 1.67
SPNS2-203ENST00000570979 CCDC27Q2M243 656 aa25.47■■□□□ 1.67
SPNS2-203ENST00000570979 FAM98CQ17RN3 349 aaKnown RBP25.46■■□□□ 1.67
SPNS2-203ENST00000570979 TNNT2P45379 298 aaPredicted RBP25.46■■□□□ 1.67
SPNS2-203ENST00000570979 SPATA31A5Q5VU36 1347 aa25.45■■□□□ 1.66
SPNS2-203ENST00000570979 SPATA31A7Q8IWB4 1347 aa25.45■■□□□ 1.66
SPNS2-203ENST00000570979 WDR63Q8IWG1 891 aa25.45■■□□□ 1.66
SPNS2-203ENST00000570979 GCP02774 474 aa25.44■■□□□ 1.66
SPNS2-203ENST00000570979 AKAP12Q02952 1782 aa25.44■■□□□ 1.66
SPNS2-203ENST00000570979 CD163L1Q9NR16 1453 aa25.43■■□□□ 1.66
SPNS2-203ENST00000570979 PIK3C2AO00443 1686 aa25.43■■□□□ 1.66
SPNS2-203ENST00000570979 FYB1O15117 783 aa25.43■■□□□ 1.66
SPNS2-203ENST00000570979 STRN4Q9NRL3 753 aa25.43■■□□□ 1.66
SPNS2-203ENST00000570979 NLRP6P59044 892 aa25.42■■□□□ 1.66
SPNS2-203ENST00000570979 CPDO75976 1380 aa25.42■■□□□ 1.66
SPNS2-203ENST00000570979 CAMTA1Q9Y6Y1 1673 aa25.41■■□□□ 1.66
SPNS2-203ENST00000570979 CPSF1Q10570 1443 aaKnown RBP25.41■■□□□ 1.66
SPNS2-203ENST00000570979 TTC21BQ7Z4L5 1316 aa25.41■■□□□ 1.66
SPNS2-203ENST00000570979 WWC1Q8IX03 1113 aa25.41■■□□□ 1.66
SPNS2-203ENST00000570979 EXOC6Q8TAG9 804 aa25.41■■□□□ 1.66
SPNS2-203ENST00000570979 A0A0G2JS52 829 aa25.4■■□□□ 1.66
SPNS2-203ENST00000570979 KRT27Q7Z3Y8 459 aa25.4■■□□□ 1.66
SPNS2-203ENST00000570979 LMO7Q8WWI1 1683 aa25.4■■□□□ 1.66
SPNS2-203ENST00000570979 ZNF692Q9BU19 519 aaPredicted RBP25.39■■□□□ 1.66
SPNS2-203ENST00000570979 KIF20BQ96Q89 1820 aa25.39■■□□□ 1.65
SPNS2-203ENST00000570979 SLIT3O75094 1523 aa25.39■■□□□ 1.65
SPNS2-203ENST00000570979 SPATA31A1Q5TZJ5 1347 aa25.38■■□□□ 1.65
SPNS2-203ENST00000570979 EDC4Q6P2E9 1401 aaKnown RBP25.37■■□□□ 1.65
SPNS2-203ENST00000570979 TCP11L2Q8N4U5 519 aa25.37■■□□□ 1.65
SPNS2-203ENST00000570979 GGNBP2Q9H3C7 697 aa25.37■■□□□ 1.65
SPNS2-203ENST00000570979 U2AF1L5P0DN76 240 aaPredicted RBP25.36■■□□□ 1.65
SPNS2-203ENST00000570979 U2AF1Q01081 240 aaKnown RBP eCLIP25.36■■□□□ 1.65
SPNS2-203ENST00000570979 THSD7AQ9UPZ6 1657 aa25.36■■□□□ 1.65
SPNS2-203ENST00000570979 LARP1Q6PKG0 1096 aaKnown RBP25.35■■□□□ 1.65
SPNS2-203ENST00000570979 ZBTB7CA1YPR0 619 aa25.34■■□□□ 1.65
SPNS2-203ENST00000570979 EVA1CP58658 441 aa25.34■■□□□ 1.65
SPNS2-203ENST00000570979 CCDC125Q86Z20 511 aa25.34■■□□□ 1.65
SPNS2-203ENST00000570979 MYH16Q9H6N6 1097 aa25.34■■□□□ 1.65
SPNS2-203ENST00000570979 MON2Q7Z3U7 1717 aa25.34■■□□□ 1.65
SPNS2-203ENST00000570979 USP35Q9P2H5 1018 aa25.33■■□□□ 1.65
SPNS2-203ENST00000570979 FANCIQ9NVI1 1328 aa25.33■■□□□ 1.65
SPNS2-203ENST00000570979 FAM182BQ5T319 152 aa25.33■■□□□ 1.65
SPNS2-203ENST00000570979 ZRANB1Q9UGI0 708 aa25.33■■□□□ 1.65
SPNS2-203ENST00000570979 TTC21AQ8NDW8 1320 aa25.32■■□□□ 1.64
SPNS2-203ENST00000570979 DIAPH1O60610 1272 aaKnown RBP25.31■■□□□ 1.64
SPNS2-203ENST00000570979 CT47B1P0C2W7 299 aaPredicted RBP25.31■■□□□ 1.64
SPNS2-203ENST00000570979 NEFMP07197 916 aa25.31■■□□□ 1.64
SPNS2-203ENST00000570979 COL5A2P05997 1499 aaPredicted RBP25.3■■□□□ 1.64
SPNS2-203ENST00000570979 TCERG1O14776 1098 aaKnown RBP25.3■■□□□ 1.64
SPNS2-203ENST00000570979 AAMPQ13685 434 aa25.3■■□□□ 1.64
SPNS2-203ENST00000570979 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.3■■□□□ 1.64
SPNS2-203ENST00000570979 MAPK8IP3Q9UPT6 1336 aa25.3■■□□□ 1.64
SPNS2-203ENST00000570979 COL18A1P39060 1754 aa25.3■■□□□ 1.64
SPNS2-203ENST00000570979 SOX12O15370 315 aa25.29■■□□□ 1.64
SPNS2-203ENST00000570979 DEFB132Q7Z7B7 95 aa25.29■■□□□ 1.64
SPNS2-203ENST00000570979 AATKQ6ZMQ8 1374 aa25.29■■□□□ 1.64
SPNS2-203ENST00000570979 PDE3AQ14432 1141 aa25.28■■□□□ 1.64
SPNS2-203ENST00000570979 ERICH6Q7L0X2 663 aa25.28■■□□□ 1.64
SPNS2-203ENST00000570979 CRBNQ96SW2 442 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms