RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 SEPT12Q8IYM1 358 aa18.7■□□□□ 0.58
RPAIN-207ENST00000570883 FAM98CQ17RN3 349 aaKnown RBP18.69■□□□□ 0.58
RPAIN-207ENST00000570883 LARP1Q6PKG0 1096 aaKnown RBP18.69■□□□□ 0.58
RPAIN-207ENST00000570883 AXIN2Q9Y2T1 843 aa18.68■□□□□ 0.58
RPAIN-207ENST00000570883 PARP4Q9UKK3 1724 aaKnown RBP18.67■□□□□ 0.58
RPAIN-207ENST00000570883 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
RPAIN-207ENST00000570883 C11orf95C9JLR9 678 aaPredicted RBP18.66■□□□□ 0.58
RPAIN-207ENST00000570883 EVA1CP58658 441 aa18.66■□□□□ 0.58
RPAIN-207ENST00000570883 CARD14Q9BXL6 1004 aa18.66■□□□□ 0.58
RPAIN-207ENST00000570883 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
RPAIN-207ENST00000570883 CRB1P82279 1406 aa18.66■□□□□ 0.58
RPAIN-207ENST00000570883 FYB1O15117 783 aa18.64■□□□□ 0.57
RPAIN-207ENST00000570883 POLR3GLQ9BT43 218 aa18.64■□□□□ 0.57
RPAIN-207ENST00000570883 USP35Q9P2H5 1018 aa18.64■□□□□ 0.57
RPAIN-207ENST00000570883 LRRC37A3O60309 1634 aa18.63■□□□□ 0.57
RPAIN-207ENST00000570883 A0A0G2JS52 829 aa18.63■□□□□ 0.57
RPAIN-207ENST00000570883 MYT1Q01538 1121 aa18.63■□□□□ 0.57
RPAIN-207ENST00000570883 GGNBP2Q9H3C7 697 aa18.63■□□□□ 0.57
RPAIN-207ENST00000570883 BARGINQ6ZT62 677 aa18.62■□□□□ 0.57
RPAIN-207ENST00000570883 KRT27Q7Z3Y8 459 aa18.62■□□□□ 0.57
RPAIN-207ENST00000570883 COG3Q96JB2 828 aa18.62■□□□□ 0.57
RPAIN-207ENST00000570883 WDR17Q8IZU2 1322 aa18.62■□□□□ 0.57
RPAIN-207ENST00000570883 FAM208AQ9UK61 1670 aaKnown RBP18.62■□□□□ 0.57
RPAIN-207ENST00000570883 RGPD2P0DJD1 1756 aa18.62■□□□□ 0.57
RPAIN-207ENST00000570883 PEAK1Q9H792 1746 aa18.61■□□□□ 0.57
RPAIN-207ENST00000570883 TCP11L2Q8N4U5 519 aa18.61■□□□□ 0.57
RPAIN-207ENST00000570883 FBLN1P23142 703 aa18.6■□□□□ 0.57
RPAIN-207ENST00000570883 MAP2P11137 1827 aaKnown RBP18.59■□□□□ 0.57
RPAIN-207ENST00000570883 TNS1Q9HBL0 1735 aaKnown RBP18.58■□□□□ 0.57
RPAIN-207ENST00000570883 ERBB3P21860 1342 aa18.58■□□□□ 0.57
RPAIN-207ENST00000570883 KIF7Q2M1P5 1343 aa18.58■□□□□ 0.57
RPAIN-207ENST00000570883 MAP3K19Q56UN5 1328 aa18.58■□□□□ 0.57
RPAIN-207ENST00000570883 THRAP3Q9Y2W1 955 aaKnown RBP18.58■□□□□ 0.56
RPAIN-207ENST00000570883 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
RPAIN-207ENST00000570883 RGPD1P0DJD0 1748 aa18.57■□□□□ 0.56
RPAIN-207ENST00000570883 TOM1L2Q6ZVM7 507 aa18.57■□□□□ 0.56
RPAIN-207ENST00000570883 FAM182BQ5T319 152 aa18.56■□□□□ 0.56
RPAIN-207ENST00000570883 DISP2A7MBM2 1401 aa18.56■□□□□ 0.56
RPAIN-207ENST00000570883 SBF2Q86WG5 1849 aa18.56■□□□□ 0.56
RPAIN-207ENST00000570883 CSB-PGBD3P0DP91 1061 aa18.55■□□□□ 0.56
RPAIN-207ENST00000570883 IP6K1Q92551 441 aa18.55■□□□□ 0.56
RPAIN-207ENST00000570883 PANK3Q9H999 370 aa18.55■□□□□ 0.56
RPAIN-207ENST00000570883 CGNL1Q0VF96 1302 aa18.54■□□□□ 0.56
RPAIN-207ENST00000570883 CARD10Q9BWT7 1032 aa18.54■□□□□ 0.56
RPAIN-207ENST00000570883 RTL1A6NKG5 1358 aa18.54■□□□□ 0.56
RPAIN-207ENST00000570883 HOXC9P31274 260 aa18.53■□□□□ 0.56
RPAIN-207ENST00000570883 RRS1Q15050 365 aaKnown RBP18.53■□□□□ 0.56
RPAIN-207ENST00000570883 ANKRD24Q8TF21 1146 aa18.53■□□□□ 0.56
RPAIN-207ENST00000570883 CCDC7Q96M83 1385 aa18.53■□□□□ 0.56
RPAIN-207ENST00000570883 AMPHP49418 695 aa18.5■□□□□ 0.55
RPAIN-207ENST00000570883 CCDC125Q86Z20 511 aa18.5■□□□□ 0.55
RPAIN-207ENST00000570883 NLRP2Q9NX02 1062 aa18.49■□□□□ 0.55
RPAIN-207ENST00000570883 SHANK3Q9BYB0 1731 aa18.49■□□□□ 0.55
RPAIN-207ENST00000570883 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
RPAIN-207ENST00000570883 LTV1Q96GA3 475 aaPredicted RBP18.48■□□□□ 0.55
RPAIN-207ENST00000570883 TNS2Q63HR2 1409 aa18.48■□□□□ 0.55
RPAIN-207ENST00000570883 NSD2O96028 1365 aa18.47■□□□□ 0.55
RPAIN-207ENST00000570883 FLT4P35916 1363 aa18.47■□□□□ 0.55
RPAIN-207ENST00000570883 KIF24Q5T7B8 1368 aa18.47■□□□□ 0.55
RPAIN-207ENST00000570883 PDE3BQ13370 1112 aa18.47■□□□□ 0.55
RPAIN-207ENST00000570883 EMILIN1Q9Y6C2 1016 aa18.47■□□□□ 0.55
RPAIN-207ENST00000570883 INSRP06213 1382 aa18.46■□□□□ 0.55
RPAIN-207ENST00000570883 DDB1Q16531 1140 aa18.46■□□□□ 0.55
RPAIN-207ENST00000570883 CDCA7Q9BWT1 371 aaPredicted RBP18.46■□□□□ 0.55
RPAIN-207ENST00000570883 OVOS2A0A0G2JMS6 1433 aa18.46■□□□□ 0.55
RPAIN-207ENST00000570883 HSP90AB2PQ58FF8 381 aa18.45■□□□□ 0.54
RPAIN-207ENST00000570883 FAM196AQ6ZSG2 479 aa18.45■□□□□ 0.54
RPAIN-207ENST00000570883 DEFB132Q7Z7B7 95 aa18.45■□□□□ 0.54
RPAIN-207ENST00000570883 KAT6BQ8WYB5 2073 aa18.43■□□□□ 0.54
RPAIN-207ENST00000570883 MEGF6O75095 1541 aa18.43■□□□□ 0.54
RPAIN-207ENST00000570883 SMG6Q86US8 1419 aaKnown RBP18.42■□□□□ 0.54
RPAIN-207ENST00000570883 TRIM37O94972 964 aa18.42■□□□□ 0.54
RPAIN-207ENST00000570883 IL2RBP14784 551 aa18.42■□□□□ 0.54
RPAIN-207ENST00000570883 TNNT2P45379 298 aaPredicted RBP18.42■□□□□ 0.54
RPAIN-207ENST00000570883 AMER1Q5JTC6 1135 aaPredicted RBP18.42■□□□□ 0.54
RPAIN-207ENST00000570883 MARCH10Q8NA82 808 aaPredicted RBP18.42■□□□□ 0.54
RPAIN-207ENST00000570883 RREB1Q92766 1687 aa18.41■□□□□ 0.54
RPAIN-207ENST00000570883 SF3B2Q13435 895 aaKnown RBP18.41■□□□□ 0.54
RPAIN-207ENST00000570883 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
RPAIN-207ENST00000570883 KNSTRNQ9Y448 316 aa18.41■□□□□ 0.54
RPAIN-207ENST00000570883 NHSQ6T4R5 1651 aa18.41■□□□□ 0.54
RPAIN-207ENST00000570883 BCL9O00512 1426 aa18.4■□□□□ 0.54
RPAIN-207ENST00000570883 PER1O15534 1290 aaPredicted RBP18.4■□□□□ 0.54
RPAIN-207ENST00000570883 NBPF6Q5VWK0 638 aa18.4■□□□□ 0.54
RPAIN-207ENST00000570883 NBPF4Q96M43 638 aa18.4■□□□□ 0.54
RPAIN-207ENST00000570883 RGPD3A6NKT7 1758 aaPredicted RBP18.4■□□□□ 0.54
RPAIN-207ENST00000570883 RGPD4Q7Z3J3 1758 aa18.4■□□□□ 0.54
RPAIN-207ENST00000570883 NCAPD2Q15021 1401 aa18.4■□□□□ 0.54
RPAIN-207ENST00000570883 USHBP1Q8N6Y0 703 aa18.39■□□□□ 0.53
RPAIN-207ENST00000570883 NUP188Q5SRE5 1749 aa18.38■□□□□ 0.53
RPAIN-207ENST00000570883 PKD1L3Q7Z443 1732 aa18.38■□□□□ 0.53
RPAIN-207ENST00000570883 EXOC5O00471 708 aa18.38■□□□□ 0.53
RPAIN-207ENST00000570883 PPM1GO15355 546 aaPredicted RBP18.38■□□□□ 0.53
RPAIN-207ENST00000570883 BAG6P46379 1132 aa18.37■□□□□ 0.53
RPAIN-207ENST00000570883 MORC1Q86VD1 984 aa18.37■□□□□ 0.53
RPAIN-207ENST00000570883 DOT1LQ8TEK3 1739 aa18.37■□□□□ 0.53
RPAIN-207ENST00000570883 BTAF1O14981 1849 aa18.36■□□□□ 0.53
RPAIN-207ENST00000570883 EN1Q05925 392 aaPredicted RBP18.36■□□□□ 0.53
RPAIN-207ENST00000570883 PTF1AQ7RTS3 328 aa18.36■□□□□ 0.53
RPAIN-207ENST00000570883 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms