RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 CRB1P82279 1406 aa7.6□□□□□ -1.19
CHD3-212ENST00000570758 NINLQ9Y2I6 1382 aa7.59□□□□□ -1.19
CHD3-212ENST00000570758 SLC24A1O60721 1099 aa7.59□□□□□ -1.19
CHD3-212ENST00000570758 THRAP3Q9Y2W1 955 aaKnown RBP7.59□□□□□ -1.19
CHD3-212ENST00000570758 OVOS2A0A0J9YW53 1432 aa7.59□□□□□ -1.19
CHD3-212ENST00000570758 OVOS2Q6IE36 1432 aa7.59□□□□□ -1.19
CHD3-212ENST00000570758 WDR17Q8IZU2 1322 aa7.58□□□□□ -1.2
CHD3-212ENST00000570758 TOM1L2Q6ZVM7 507 aa7.58□□□□□ -1.2
CHD3-212ENST00000570758 RGPD5Q99666 1765 aa7.58□□□□□ -1.2
CHD3-212ENST00000570758 ANKRD36BQ8N2N9 1353 aa7.58□□□□□ -1.2
CHD3-212ENST00000570758 FBLN1P23142 703 aa7.57□□□□□ -1.2
CHD3-212ENST00000570758 SF3B2Q13435 895 aaKnown RBP7.57□□□□□ -1.2
CHD3-212ENST00000570758 CARD10Q9BWT7 1032 aa7.57□□□□□ -1.2
CHD3-212ENST00000570758 ABCC6O95255 1503 aa7.57□□□□□ -1.2
CHD3-212ENST00000570758 PARP4Q9UKK3 1724 aaKnown RBP7.56□□□□□ -1.2
CHD3-212ENST00000570758 TRIM37O94972 964 aa7.56□□□□□ -1.2
CHD3-212ENST00000570758 CSB-PGBD3P0DP91 1061 aa7.56□□□□□ -1.2
CHD3-212ENST00000570758 BAG6P46379 1132 aa7.56□□□□□ -1.2
CHD3-212ENST00000570758 PDE3BQ13370 1112 aa7.56□□□□□ -1.2
CHD3-212ENST00000570758 FAM196AQ6ZSG2 479 aa7.56□□□□□ -1.2
CHD3-212ENST00000570758 CARD14Q9BXL6 1004 aa7.56□□□□□ -1.2
CHD3-212ENST00000570758 RGPD1P0DJD0 1748 aa7.55□□□□□ -1.2
CHD3-212ENST00000570758 TNS1Q9HBL0 1735 aaKnown RBP7.55□□□□□ -1.2
CHD3-212ENST00000570758 DISP2A7MBM2 1401 aa7.55□□□□□ -1.2
CHD3-212ENST00000570758 MYOM1P52179 1685 aa7.55□□□□□ -1.2
CHD3-212ENST00000570758 FYB1O15117 783 aa7.55□□□□□ -1.2
CHD3-212ENST00000570758 HSPA5P11021 654 aaKnown RBP7.55□□□□□ -1.2
CHD3-212ENST00000570758 EN1Q05925 392 aaPredicted RBP7.55□□□□□ -1.2
CHD3-212ENST00000570758 CDCA8Q53HL2 280 aa7.55□□□□□ -1.2
CHD3-212ENST00000570758 ANKRD24Q8TF21 1146 aa7.55□□□□□ -1.2
CHD3-212ENST00000570758 COG3Q96JB2 828 aa7.55□□□□□ -1.2
CHD3-212ENST00000570758 GGNBP2Q9H3C7 697 aa7.55□□□□□ -1.2
CHD3-212ENST00000570758 LTN1O94822 1766 aa7.55□□□□□ -1.2
CHD3-212ENST00000570758 LRRC37A3O60309 1634 aa7.55□□□□□ -1.2
CHD3-212ENST00000570758 WNK3Q9BYP7 1800 aa7.55□□□□□ -1.2
CHD3-212ENST00000570758 ERBB3P21860 1342 aa7.54□□□□□ -1.2
CHD3-212ENST00000570758 MAP3K19Q56UN5 1328 aa7.54□□□□□ -1.2
CHD3-212ENST00000570758 EP400Q96L91 3159 aa7.54□□□□□ -1.2
CHD3-212ENST00000570758 EIF4G2P78344 907 aaKnown RBP eCLIP7.54□□□□□ -1.2
CHD3-212ENST00000570758 DDB1Q16531 1140 aa7.54□□□□□ -1.2
CHD3-212ENST00000570758 MARCH10Q8NA82 808 aaPredicted RBP7.54□□□□□ -1.2
CHD3-212ENST00000570758 IP6K1Q92551 441 aa7.54□□□□□ -1.2
CHD3-212ENST00000570758 PEAK1Q9H792 1746 aa7.54□□□□□ -1.2
CHD3-212ENST00000570758 CCDC7Q96M83 1385 aa7.54□□□□□ -1.2
CHD3-212ENST00000570758 NSD3Q9BZ95 1437 aa7.53□□□□□ -1.2
CHD3-212ENST00000570758 APBA3O96018 575 aa7.53□□□□□ -1.2
CHD3-212ENST00000570758 EZH2Q15910 746 aaKnown RBP7.53□□□□□ -1.2
CHD3-212ENST00000570758 PTF1AQ7RTS3 328 aa7.53□□□□□ -1.2
CHD3-212ENST00000570758 LTV1Q96GA3 475 aaPredicted RBP7.53□□□□□ -1.2
CHD3-212ENST00000570758 CAMKK2Q96RR4 588 aa7.53□□□□□ -1.2
CHD3-212ENST00000570758 NLRP2Q9NX02 1062 aa7.53□□□□□ -1.2
CHD3-212ENST00000570758 OVOS2A0A0G2JMS6 1433 aa7.52□□□□□ -1.2
CHD3-212ENST00000570758 C11orf95C9JLR9 678 aaPredicted RBP7.52□□□□□ -1.21
CHD3-212ENST00000570758 HOXC9P31274 260 aa7.52□□□□□ -1.21
CHD3-212ENST00000570758 RRS1Q15050 365 aaKnown RBP7.52□□□□□ -1.21
CHD3-212ENST00000570758 POLR3GLQ9BT43 218 aa7.52□□□□□ -1.21
CHD3-212ENST00000570758 CDCA7Q9BWT1 371 aaPredicted RBP7.52□□□□□ -1.21
CHD3-212ENST00000570758 TNS2Q63HR2 1409 aa7.52□□□□□ -1.21
CHD3-212ENST00000570758 KIF20BQ96Q89 1820 aa7.51□□□□□ -1.21
CHD3-212ENST00000570758 PSDA5PKW4 1024 aaPredicted RBP7.51□□□□□ -1.21
CHD3-212ENST00000570758 EXOC5O00471 708 aa7.51□□□□□ -1.21
CHD3-212ENST00000570758 AMPHP49418 695 aa7.51□□□□□ -1.21
CHD3-212ENST00000570758 IL2RBP14784 551 aa7.5□□□□□ -1.21
CHD3-212ENST00000570758 BCL9O00512 1426 aa7.5□□□□□ -1.21
CHD3-212ENST00000570758 SBF2Q86WG5 1849 aa7.5□□□□□ -1.21
CHD3-212ENST00000570758 RTL1A6NKG5 1358 aa7.49□□□□□ -1.21
CHD3-212ENST00000570758 PARD3Q8TEW0 1356 aa7.49□□□□□ -1.21
CHD3-212ENST00000570758 FAM208AQ9UK61 1670 aaKnown RBP7.49□□□□□ -1.21
CHD3-212ENST00000570758 R3HDM1Q15032 1099 aaKnown RBP7.49□□□□□ -1.21
CHD3-212ENST00000570758 HSP90AB2PQ58FF8 381 aa7.49□□□□□ -1.21
CHD3-212ENST00000570758 BCL11BQ9C0K0 894 aaPredicted RBP7.49□□□□□ -1.21
CHD3-212ENST00000570758 EMILIN1Q9Y6C2 1016 aa7.49□□□□□ -1.21
CHD3-212ENST00000570758 CGNL1Q0VF96 1302 aa7.49□□□□□ -1.21
CHD3-212ENST00000570758 RGPD2P0DJD1 1756 aa7.48□□□□□ -1.21
CHD3-212ENST00000570758 INSRP06213 1382 aa7.48□□□□□ -1.21
CHD3-212ENST00000570758 RREB1Q92766 1687 aa7.48□□□□□ -1.21
CHD3-212ENST00000570758 KCNQ2O43526 872 aa7.48□□□□□ -1.21
CHD3-212ENST00000570758 NUP188Q5SRE5 1749 aa7.48□□□□□ -1.21
CHD3-212ENST00000570758 NBPF6Q5VWK0 638 aa7.48□□□□□ -1.21
CHD3-212ENST00000570758 USHBP1Q8N6Y0 703 aa7.48□□□□□ -1.21
CHD3-212ENST00000570758 ACSBG1Q96GR2 724 aa7.48□□□□□ -1.21
CHD3-212ENST00000570758 NBPF4Q96M43 638 aa7.48□□□□□ -1.21
CHD3-212ENST00000570758 PANK3Q9H999 370 aa7.48□□□□□ -1.21
CHD3-212ENST00000570758 MEGF6O75095 1541 aa7.47□□□□□ -1.21
CHD3-212ENST00000570758 FLT4P35916 1363 aa7.47□□□□□ -1.21
CHD3-212ENST00000570758 PLSCR1O15162 318 aa7.47□□□□□ -1.21
CHD3-212ENST00000570758 PROM2Q8N271 834 aa7.47□□□□□ -1.21
CHD3-212ENST00000570758 DDX54Q8TDD1 881 aaKnown RBP7.47□□□□□ -1.21
CHD3-212ENST00000570758 TNNT2P45379 298 aaPredicted RBP7.46□□□□□ -1.22
CHD3-212ENST00000570758 ANO8Q9HCE9 1232 aaPredicted RBP7.46□□□□□ -1.22
CHD3-212ENST00000570758 POLKQ9UBT6 870 aa7.46□□□□□ -1.22
CHD3-212ENST00000570758 KIF7Q2M1P5 1343 aa7.46□□□□□ -1.22
CHD3-212ENST00000570758 KIF24Q5T7B8 1368 aa7.46□□□□□ -1.22
CHD3-212ENST00000570758 SMG6Q86US8 1419 aaKnown RBP7.45□□□□□ -1.22
CHD3-212ENST00000570758 NHSQ6T4R5 1651 aa7.45□□□□□ -1.22
CHD3-212ENST00000570758 SHANK3Q9BYB0 1731 aa7.45□□□□□ -1.22
CHD3-212ENST00000570758 ANKRD26Q9UPS8 1709 aa7.45□□□□□ -1.22
CHD3-212ENST00000570758 PPM1GO15355 546 aaPredicted RBP7.45□□□□□ -1.22
CHD3-212ENST00000570758 ZCRB1Q8TBF4 217 aaKnown RBP7.45□□□□□ -1.22
CHD3-212ENST00000570758 RGPD3A6NKT7 1758 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms