RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 LRRC37A3O60309 1634 aa30.07■■■□□ 2.4
PKD1-240ENST00000570253 SIN3AQ96ST3 1273 aa30.06■■■□□ 2.4
PKD1-240ENST00000570253 PPP1R1BQ9UD71 204 aaPredicted RBP30.06■■■□□ 2.4
PKD1-240ENST00000570253 AKAP12Q02952 1782 aa30.05■■■□□ 2.4
PKD1-240ENST00000570253 SOX12O15370 315 aa30.05■■■□□ 2.4
PKD1-240ENST00000570253 RGPD3A6NKT7 1758 aaPredicted RBP30.04■■■□□ 2.4
PKD1-240ENST00000570253 RGPD4Q7Z3J3 1758 aa30.04■■■□□ 2.4
PKD1-240ENST00000570253 KTN1Q86UP2 1357 aaKnown RBP30.03■■■□□ 2.4
PKD1-240ENST00000570253 COL18A1P39060 1754 aa30.03■■■□□ 2.4
PKD1-240ENST00000570253 ARHGEF25Q86VW2 580 aa30.03■■■□□ 2.4
PKD1-240ENST00000570253 SPON1Q9HCB6 807 aa30.03■■■□□ 2.4
PKD1-240ENST00000570253 WNK3Q9BYP7 1800 aa30.03■■■□□ 2.4
PKD1-240ENST00000570253 PEAK1Q9H792 1746 aa30.02■■■□□ 2.4
PKD1-240ENST00000570253 PLSCR1O15162 318 aa30.02■■■□□ 2.4
PKD1-240ENST00000570253 DCAF8L1A6NGE4 600 aa30.01■■■□□ 2.39
PKD1-240ENST00000570253 BCL11BQ9C0K0 894 aaPredicted RBP30.01■■■□□ 2.39
PKD1-240ENST00000570253 AXIN2Q9Y2T1 843 aa30.01■■■□□ 2.39
PKD1-240ENST00000570253 SBF2Q86WG5 1849 aa30.01■■■□□ 2.39
PKD1-240ENST00000570253 CARD10Q9BWT7 1032 aa30■■■□□ 2.39
PKD1-240ENST00000570253 KCNQ2O43526 872 aa29.98■■■□□ 2.39
PKD1-240ENST00000570253 CCDC7Q96M83 1385 aa29.97■■■□□ 2.39
PKD1-240ENST00000570253 RGPD5Q99666 1765 aa29.96■■■□□ 2.39
PKD1-240ENST00000570253 EXOC5O00471 708 aa29.96■■■□□ 2.39
PKD1-240ENST00000570253 ABCC6O95255 1503 aa29.96■■■□□ 2.39
PKD1-240ENST00000570253 BCL9O00512 1426 aa29.94■■■□□ 2.38
PKD1-240ENST00000570253 SBNO2Q9Y2G9 1366 aa29.93■■■□□ 2.38
PKD1-240ENST00000570253 MARCH10Q8NA82 808 aaPredicted RBP29.93■■■□□ 2.38
PKD1-240ENST00000570253 MON2Q7Z3U7 1717 aa29.93■■■□□ 2.38
PKD1-240ENST00000570253 HDGFL2Q7Z4V5 671 aaPredicted RBP29.92■■■□□ 2.38
PKD1-240ENST00000570253 CARD11Q9BXL7 1154 aa29.92■■■□□ 2.38
PKD1-240ENST00000570253 NFAT5O94916 1531 aa29.91■■■□□ 2.38
PKD1-240ENST00000570253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.91■■■□□ 2.38
PKD1-240ENST00000570253 TMC1Q8TDI8 760 aa29.9■■■□□ 2.38
PKD1-240ENST00000570253 NINLQ9Y2I6 1382 aa29.9■■■□□ 2.38
PKD1-240ENST00000570253 USP31Q70CQ4 1352 aa29.87■■■□□ 2.37
PKD1-240ENST00000570253 TNS2Q63HR2 1409 aa29.87■■■□□ 2.37
PKD1-240ENST00000570253 STK32BQ9NY57 414 aa29.86■■■□□ 2.37
PKD1-240ENST00000570253 NLRP2Q9NX02 1062 aa29.85■■■□□ 2.37
PKD1-240ENST00000570253 ANO8Q9HCE9 1232 aaPredicted RBP29.84■■■□□ 2.37
PKD1-240ENST00000570253 TERF2IPQ9NYB0 399 aa29.84■■■□□ 2.37
PKD1-240ENST00000570253 TONSLQ96HA7 1378 aa29.83■■■□□ 2.37
PKD1-240ENST00000570253 YY1P25490 414 aa29.83■■■□□ 2.37
PKD1-240ENST00000570253 USP54Q70EL1 1684 aa29.82■■■□□ 2.36
PKD1-240ENST00000570253 ERBB3P21860 1342 aa29.82■■■□□ 2.36
PKD1-240ENST00000570253 TXNRD1Q16881 649 aa29.82■■■□□ 2.36
PKD1-240ENST00000570253 PTF1AQ7RTS3 328 aa29.82■■■□□ 2.36
PKD1-240ENST00000570253 NME9Q86XW9 330 aa29.81■■■□□ 2.36
PKD1-240ENST00000570253 EDC4Q6P2E9 1401 aaKnown RBP29.8■■■□□ 2.36
PKD1-240ENST00000570253 LTN1O94822 1766 aa29.8■■■□□ 2.36
PKD1-240ENST00000570253 IL2RBP14784 551 aa29.8■■■□□ 2.36
PKD1-240ENST00000570253 CASZ1Q86V15 1759 aa29.8■■■□□ 2.36
PKD1-240ENST00000570253 PROM2Q8N271 834 aa29.78■■■□□ 2.36
PKD1-240ENST00000570253 NHSQ6T4R5 1651 aa29.76■■■□□ 2.36
PKD1-240ENST00000570253 CD163L1Q9NR16 1453 aa29.76■■■□□ 2.35
PKD1-240ENST00000570253 SLC15A2Q16348 729 aa29.76■■■□□ 2.35
PKD1-240ENST00000570253 ANKRD24Q8TF21 1146 aa29.76■■■□□ 2.35
PKD1-240ENST00000570253 ZBTB7AO95365 584 aa29.75■■■□□ 2.35
PKD1-240ENST00000570253 PUS7Q96PZ0 661 aaKnown RBP29.75■■■□□ 2.35
PKD1-240ENST00000570253 SLC12A5Q9H2X9 1139 aa29.75■■■□□ 2.35
PKD1-240ENST00000570253 SLC24A1O60721 1099 aa29.74■■■□□ 2.35
PKD1-240ENST00000570253 ACSBG1Q96GR2 724 aa29.74■■■□□ 2.35
PKD1-240ENST00000570253 A0A1W2PP64 1363 aa29.71■■■□□ 2.35
PKD1-240ENST00000570253 KAT6BQ8WYB5 2073 aa29.7■■■□□ 2.35
PKD1-240ENST00000570253 ATF5Q9Y2D1 282 aaPredicted RBP29.7■■■□□ 2.35
PKD1-240ENST00000570253 MTFR1LQ9H019 292 aa29.68■■■□□ 2.34
PKD1-240ENST00000570253 FAM208AQ9UK61 1670 aaKnown RBP29.67■■■□□ 2.34
PKD1-240ENST00000570253 PDGFDQ9GZP0 370 aaPredicted RBP29.67■■■□□ 2.34
PKD1-240ENST00000570253 COG3Q96JB2 828 aa29.66■■■□□ 2.34
PKD1-240ENST00000570253 IP6K1Q92551 441 aa29.65■■■□□ 2.34
PKD1-240ENST00000570253 MYOM1P52179 1685 aa29.65■■■□□ 2.34
PKD1-240ENST00000570253 BTAF1O14981 1849 aa29.64■■■□□ 2.33
PKD1-240ENST00000570253 PTGER2P43116 358 aa29.63■■■□□ 2.33
PKD1-240ENST00000570253 LTV1Q96GA3 475 aaPredicted RBP29.63■■■□□ 2.33
PKD1-240ENST00000570253 AMPHP49418 695 aa29.6■■■□□ 2.33
PKD1-240ENST00000570253 DDX54Q8TDD1 881 aaKnown RBP29.6■■■□□ 2.33
PKD1-240ENST00000570253 ST20-MTHFSA0A0A6YYL1 179 aa29.58■■■□□ 2.33
PKD1-240ENST00000570253 FHDC1Q9C0D6 1143 aaPredicted RBP29.58■■■□□ 2.33
PKD1-240ENST00000570253 SLC27A3Q5K4L6 730 aa29.56■■■□□ 2.32
PKD1-240ENST00000570253 SYT17Q9BSW7 474 aa29.56■■■□□ 2.32
PKD1-240ENST00000570253 PAPPAQ13219 1627 aa29.56■■■□□ 2.32
PKD1-240ENST00000570253 SYTL4Q96C24 671 aaPredicted RBP29.55■■■□□ 2.32
PKD1-240ENST00000570253 ARXQ96QS3 562 aa29.55■■■□□ 2.32
PKD1-240ENST00000570253 HOXC9P31274 260 aa29.54■■■□□ 2.32
PKD1-240ENST00000570253 TESK2Q96S53 571 aa29.54■■■□□ 2.32
PKD1-240ENST00000570253 MAP3K19Q56UN5 1328 aa29.53■■■□□ 2.32
PKD1-240ENST00000570253 ANKRD36BQ8N2N9 1353 aa29.52■■■□□ 2.32
PKD1-240ENST00000570253 TMF1P82094 1093 aa29.51■■■□□ 2.31
PKD1-240ENST00000570253 SMG6Q86US8 1419 aaKnown RBP29.51■■■□□ 2.31
PKD1-240ENST00000570253 RTL1A6NKG5 1358 aa29.51■■■□□ 2.31
PKD1-240ENST00000570253 ZNF827Q17R98 1081 aa29.5■■■□□ 2.31
PKD1-240ENST00000570253 SLC16A10Q8TF71 515 aa29.5■■■□□ 2.31
PKD1-240ENST00000570253 SGIP1Q9BQI5 828 aa29.5■■■□□ 2.31
PKD1-240ENST00000570253 POLD1P28340 1107 aa29.49■■■□□ 2.31
PKD1-240ENST00000570253 ZCRB1Q8TBF4 217 aaKnown RBP29.49■■■□□ 2.31
PKD1-240ENST00000570253 LRRC4BQ9NT99 713 aa29.49■■■□□ 2.31
PKD1-240ENST00000570253 PRIM1P49642 420 aaKnown RBP29.46■■■□□ 2.31
PKD1-240ENST00000570253 CDCA8Q53HL2 280 aa29.46■■■□□ 2.31
PKD1-240ENST00000570253 TFCP2L1Q9NZI6 479 aa29.46■■■□□ 2.31
PKD1-240ENST00000570253 QSER1Q2KHR3 1735 aa29.45■■■□□ 2.31
PKD1-240ENST00000570253 DOT1LQ8TEK3 1739 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms