RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 FRMPD1Q5SYB0 1578 aa9.34□□□□□ -0.91
GDE1-204ENST00000569773 PER1O15534 1290 aaPredicted RBP9.34□□□□□ -0.91
GDE1-204ENST00000569773 UBTFP17480 764 aaKnown RBP9.34□□□□□ -0.91
GDE1-204ENST00000569773 DESI1Q6ICB0 168 aa9.34□□□□□ -0.91
GDE1-204ENST00000569773 LRRN4Q8WUT4 740 aa9.34□□□□□ -0.91
GDE1-204ENST00000569773 MSS51Q4VC12 460 aa9.33□□□□□ -0.92
GDE1-204ENST00000569773 NKX2-3Q8TAU0 364 aa9.33□□□□□ -0.92
GDE1-204ENST00000569773 HMX1Q9NP08 348 aaPredicted RBP9.33□□□□□ -0.92
GDE1-204ENST00000569773 EFCAB5A4FU69 1503 aa9.32□□□□□ -0.92
GDE1-204ENST00000569773 RICTORQ6R327 1708 aa9.32□□□□□ -0.92
GDE1-204ENST00000569773 JUNDP17535 347 aa9.32□□□□□ -0.92
GDE1-204ENST00000569773 ADAMTSL3P82987 1691 aa9.32□□□□□ -0.92
GDE1-204ENST00000569773 FHOD3Q2V2M9 1422 aa9.31□□□□□ -0.92
GDE1-204ENST00000569773 LYPD8Q6UX82 237 aa9.31□□□□□ -0.92
GDE1-204ENST00000569773 CLUAP1Q96AJ1 413 aa9.31□□□□□ -0.92
GDE1-204ENST00000569773 NEO1Q92859 1461 aa9.31□□□□□ -0.92
GDE1-204ENST00000569773 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
GDE1-204ENST00000569773 DXOO77932 396 aaKnown RBP9.3□□□□□ -0.92
GDE1-204ENST00000569773 KCNC4Q03721 635 aa9.3□□□□□ -0.92
GDE1-204ENST00000569773 POM121Q96HA1 1249 aa9.3□□□□□ -0.92
GDE1-204ENST00000569773 ZMYND15Q9H091 742 aa9.3□□□□□ -0.92
GDE1-204ENST00000569773 TTC37Q6PGP7 1564 aa9.29□□□□□ -0.92
GDE1-204ENST00000569773 LRRIQ1Q96JM4 1722 aa9.29□□□□□ -0.92
GDE1-204ENST00000569773 ARID3CA6NKF2 412 aa9.29□□□□□ -0.92
GDE1-204ENST00000569773 ITGBL1O95965 494 aaPredicted RBP9.29□□□□□ -0.92
GDE1-204ENST00000569773 MMP16P51512 607 aa9.29□□□□□ -0.92
GDE1-204ENST00000569773 GJD4Q96KN9 370 aaPredicted RBP9.29□□□□□ -0.92
GDE1-204ENST00000569773 SLC6A16Q9GZN6 736 aa9.29□□□□□ -0.92
GDE1-204ENST00000569773 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.29□□□□□ -0.92
GDE1-204ENST00000569773 BCORL1Q5H9F3 1711 aa9.28□□□□□ -0.92
GDE1-204ENST00000569773 SIGLEC1Q9BZZ2 1709 aa9.28□□□□□ -0.92
GDE1-204ENST00000569773 A0A0G2JS52 829 aa9.28□□□□□ -0.92
GDE1-204ENST00000569773 S1PR4O95977 384 aa9.28□□□□□ -0.92
GDE1-204ENST00000569773 PTPRNQ16849 979 aa9.28□□□□□ -0.92
GDE1-204ENST00000569773 EPS8L1Q8TE68 723 aa9.28□□□□□ -0.92
GDE1-204ENST00000569773 TRIM34Q9BYJ4 488 aa9.28□□□□□ -0.92
GDE1-204ENST00000569773 COG6Q9Y2V7 657 aa9.28□□□□□ -0.92
GDE1-204ENST00000569773 APBB1O00213 710 aa9.27□□□□□ -0.93
GDE1-204ENST00000569773 RAD21O60216 631 aa9.27□□□□□ -0.93
GDE1-204ENST00000569773 TBC1D2BQ9UPU7 963 aa9.27□□□□□ -0.93
GDE1-204ENST00000569773 ARHGEF40Q8TER5 1519 aa9.26□□□□□ -0.93
GDE1-204ENST00000569773 CFAP74Q9C0B2 1584 aa9.26□□□□□ -0.93
GDE1-204ENST00000569773 NR6A1Q15406 480 aa9.26□□□□□ -0.93
GDE1-204ENST00000569773 NUDT12Q9BQG2 462 aa9.26□□□□□ -0.93
GDE1-204ENST00000569773 GDPD2Q9HCC8 539 aa9.26□□□□□ -0.93
GDE1-204ENST00000569773 CDK13Q14004 1512 aaKnown RBP9.26□□□□□ -0.93
GDE1-204ENST00000569773 ZMYM4Q5VZL5 1548 aa9.26□□□□□ -0.93
GDE1-204ENST00000569773 F12P00748 615 aaPredicted RBP9.25□□□□□ -0.93
GDE1-204ENST00000569773 CCNYL3P0C7X3 344 aa9.25□□□□□ -0.93
GDE1-204ENST00000569773 MAP10Q9P2G4 905 aa9.25□□□□□ -0.93
GDE1-204ENST00000569773 MADDQ8WXG6 1647 aa9.24□□□□□ -0.93
GDE1-204ENST00000569773 ARHGAP35Q9NRY4 1499 aa9.24□□□□□ -0.93
GDE1-204ENST00000569773 A6NJR5 290 aa9.24□□□□□ -0.93
GDE1-204ENST00000569773 RAPGEF3O95398 923 aa9.24□□□□□ -0.93
GDE1-204ENST00000569773 CTHP32929 405 aa9.24□□□□□ -0.93
GDE1-204ENST00000569773 IRX2Q9BZI1 471 aaPredicted RBP9.24□□□□□ -0.93
GDE1-204ENST00000569773 PRM3Q9NNZ6 103 aa9.24□□□□□ -0.93
GDE1-204ENST00000569773 NDUFB9Q9Y6M9 179 aa9.24□□□□□ -0.93
GDE1-204ENST00000569773 MYO5CQ9NQX4 1742 aa9.23□□□□□ -0.93
GDE1-204ENST00000569773 ABL2P42684 1182 aa9.23□□□□□ -0.93
GDE1-204ENST00000569773 FAM9AQ8IZU1 332 aaPredicted RBP9.23□□□□□ -0.93
GDE1-204ENST00000569773 CCDC24Q8N4L8 307 aa9.23□□□□□ -0.93
GDE1-204ENST00000569773 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
GDE1-204ENST00000569773 FANCAO15360 1455 aa9.22□□□□□ -0.93
GDE1-204ENST00000569773 PTPRMP28827 1452 aa9.22□□□□□ -0.93
GDE1-204ENST00000569773 PROSER2Q86WR7 435 aaPredicted RBP9.22□□□□□ -0.93
GDE1-204ENST00000569773 EVA1BQ9NVM1 165 aa9.22□□□□□ -0.93
GDE1-204ENST00000569773 FCF1Q9Y324 198 aaKnown RBP9.22□□□□□ -0.93
GDE1-204ENST00000569773 KIF14Q15058 1648 aa9.22□□□□□ -0.93
GDE1-204ENST00000569773 HECW1Q76N89 1606 aa9.22□□□□□ -0.93
GDE1-204ENST00000569773 PPEF1O14829 653 aaPredicted RBP9.21□□□□□ -0.94
GDE1-204ENST00000569773 DENND4BO75064 1496 aaPredicted RBP9.21□□□□□ -0.94
GDE1-204ENST00000569773 RIMS1Q86UR5 1692 aaKnown RBP9.2□□□□□ -0.94
GDE1-204ENST00000569773 CDC42BPBQ9Y5S2 1711 aa9.2□□□□□ -0.94
GDE1-204ENST00000569773 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
GDE1-204ENST00000569773 GPR37L1O60883 481 aa9.2□□□□□ -0.94
GDE1-204ENST00000569773 RANGAP1P46060 587 aaPredicted RBP9.2□□□□□ -0.94
GDE1-204ENST00000569773 KCNH2Q12809 1159 aa9.2□□□□□ -0.94
GDE1-204ENST00000569773 FNBP4Q8N3X1 1017 aaPredicted RBP9.19□□□□□ -0.94
GDE1-204ENST00000569773 PLCH2O75038 1416 aa9.19□□□□□ -0.94
GDE1-204ENST00000569773 FMN1Q68DA7 1419 aa9.19□□□□□ -0.94
GDE1-204ENST00000569773 FER1L4A9Z1Z3 1794 aa9.18□□□□□ -0.94
GDE1-204ENST00000569773 RNF223E7ERA6 249 aa9.18□□□□□ -0.94
GDE1-204ENST00000569773 TRAK2O60296 914 aa9.18□□□□□ -0.94
GDE1-204ENST00000569773 PTCRAQ6ISU1 281 aaPredicted RBP9.18□□□□□ -0.94
GDE1-204ENST00000569773 PPP1R18Q6NYC8 613 aa9.18□□□□□ -0.94
GDE1-204ENST00000569773 ZFYVE16Q7Z3T8 1539 aa9.18□□□□□ -0.94
GDE1-204ENST00000569773 YEATS2Q9ULM3 1422 aa9.18□□□□□ -0.94
GDE1-204ENST00000569773 MAGI2Q86UL8 1455 aa9.17□□□□□ -0.94
GDE1-204ENST00000569773 POGZQ7Z3K3 1410 aa9.17□□□□□ -0.94
GDE1-204ENST00000569773 GGCXP38435 758 aa9.17□□□□□ -0.94
GDE1-204ENST00000569773 IRF5Q13568 498 aa9.17□□□□□ -0.94
GDE1-204ENST00000569773 FKBPLQ9UIM3 349 aa9.17□□□□□ -0.94
GDE1-204ENST00000569773 PCF11O94913 1555 aaKnown RBP9.16□□□□□ -0.94
GDE1-204ENST00000569773 KDM5CP41229 1560 aa9.16□□□□□ -0.94
GDE1-204ENST00000569773 PNMA1Q8ND90 353 aa9.16□□□□□ -0.94
GDE1-204ENST00000569773 UNC93B1Q9H1C4 597 aa9.16□□□□□ -0.94
GDE1-204ENST00000569773 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.16□□□□□ -0.94
GDE1-204ENST00000569773 CDC42BPAQ5VT25 1732 aa9.16□□□□□ -0.94
GDE1-204ENST00000569773 WWC1Q8IX03 1113 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms