RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 FAM98CQ17RN3 349 aaKnown RBP15.37■□□□□ 0.05
SHCBP1-207ENST00000569702 COG3Q96JB2 828 aa15.36■□□□□ 0.05
SHCBP1-207ENST00000569702 ABCC6O95255 1503 aa15.36■□□□□ 0.05
SHCBP1-207ENST00000569702 BARGINQ6ZT62 677 aa15.35■□□□□ 0.05
SHCBP1-207ENST00000569702 POLR3GLQ9BT43 218 aa15.35■□□□□ 0.05
SHCBP1-207ENST00000569702 CRB1P82279 1406 aa15.34■□□□□ 0.05
SHCBP1-207ENST00000569702 NSD3Q9BZ95 1437 aa15.34■□□□□ 0.05
SHCBP1-207ENST00000569702 BRWD3Q6RI45 1802 aa15.34■□□□□ 0.05
SHCBP1-207ENST00000569702 GGNBP2Q9H3C7 697 aa15.34■□□□□ 0.05
SHCBP1-207ENST00000569702 THRAP3Q9Y2W1 955 aaKnown RBP15.34■□□□□ 0.05
SHCBP1-207ENST00000569702 THSD7AQ9UPZ6 1657 aa15.34■□□□□ 0.05
SHCBP1-207ENST00000569702 TCP11L2Q8N4U5 519 aa15.33■□□□□ 0.04
SHCBP1-207ENST00000569702 USP35Q9P2H5 1018 aa15.33■□□□□ 0.04
SHCBP1-207ENST00000569702 WDR17Q8IZU2 1322 aa15.33■□□□□ 0.04
SHCBP1-207ENST00000569702 KRT27Q7Z3Y8 459 aa15.32■□□□□ 0.04
SHCBP1-207ENST00000569702 LTN1O94822 1766 aa15.31■□□□□ 0.04
SHCBP1-207ENST00000569702 RGPD5Q99666 1765 aa15.31■□□□□ 0.04
SHCBP1-207ENST00000569702 A0A0G2JS52 829 aa15.31■□□□□ 0.04
SHCBP1-207ENST00000569702 FBLN1P23142 703 aa15.31■□□□□ 0.04
SHCBP1-207ENST00000569702 MYT1Q01538 1121 aa15.31■□□□□ 0.04
SHCBP1-207ENST00000569702 PANK3Q9H999 370 aa15.31■□□□□ 0.04
SHCBP1-207ENST00000569702 KIF7Q2M1P5 1343 aa15.31■□□□□ 0.04
SHCBP1-207ENST00000569702 ERBB3P21860 1342 aa15.3■□□□□ 0.04
SHCBP1-207ENST00000569702 MAP3K19Q56UN5 1328 aa15.3■□□□□ 0.04
SHCBP1-207ENST00000569702 TOM1L2Q6ZVM7 507 aa15.3■□□□□ 0.04
SHCBP1-207ENST00000569702 IP6K1Q92551 441 aa15.3■□□□□ 0.04
SHCBP1-207ENST00000569702 KIF20BQ96Q89 1820 aa15.3■□□□□ 0.04
SHCBP1-207ENST00000569702 CARD10Q9BWT7 1032 aa15.3■□□□□ 0.04
SHCBP1-207ENST00000569702 CGNL1Q0VF96 1302 aa15.29■□□□□ 0.04
SHCBP1-207ENST00000569702 BLMP54132 1417 aaPredicted RBP15.28■□□□□ 0.04
SHCBP1-207ENST00000569702 CSB-PGBD3P0DP91 1061 aa15.27■□□□□ 0.04
SHCBP1-207ENST00000569702 HOXC9P31274 260 aa15.27■□□□□ 0.04
SHCBP1-207ENST00000569702 CCDC125Q86Z20 511 aa15.27■□□□□ 0.04
SHCBP1-207ENST00000569702 ANKRD24Q8TF21 1146 aa15.27■□□□□ 0.04
SHCBP1-207ENST00000569702 RRS1Q15050 365 aaKnown RBP15.26■□□□□ 0.03
SHCBP1-207ENST00000569702 RTL1A6NKG5 1358 aa15.25■□□□□ 0.03
SHCBP1-207ENST00000569702 CCDC7Q96M83 1385 aa15.25■□□□□ 0.03
SHCBP1-207ENST00000569702 AMPHP49418 695 aa15.25■□□□□ 0.03
SHCBP1-207ENST00000569702 CDCA7Q9BWT1 371 aaPredicted RBP15.25■□□□□ 0.03
SHCBP1-207ENST00000569702 PARP4Q9UKK3 1724 aaKnown RBP15.25■□□□□ 0.03
SHCBP1-207ENST00000569702 WASHC2AQ641Q2 1341 aa15.24■□□□□ 0.03
SHCBP1-207ENST00000569702 FAM182BQ5T319 152 aa15.24■□□□□ 0.03
SHCBP1-207ENST00000569702 DISP2A7MBM2 1401 aa15.24■□□□□ 0.03
SHCBP1-207ENST00000569702 KIF24Q5T7B8 1368 aa15.24■□□□□ 0.03
SHCBP1-207ENST00000569702 PDE3BQ13370 1112 aa15.23■□□□□ 0.03
SHCBP1-207ENST00000569702 NLRP2Q9NX02 1062 aa15.23■□□□□ 0.03
SHCBP1-207ENST00000569702 NSD2O96028 1365 aa15.23■□□□□ 0.03
SHCBP1-207ENST00000569702 PER1O15534 1290 aaPredicted RBP15.21■□□□□ 0.03
SHCBP1-207ENST00000569702 DDB1Q16531 1140 aa15.21■□□□□ 0.03
SHCBP1-207ENST00000569702 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
SHCBP1-207ENST00000569702 KNSTRNQ9Y448 316 aa15.21■□□□□ 0.03
SHCBP1-207ENST00000569702 EMILIN1Q9Y6C2 1016 aa15.21■□□□□ 0.03
SHCBP1-207ENST00000569702 WNK3Q9BYP7 1800 aa15.21■□□□□ 0.03
SHCBP1-207ENST00000569702 INSRP06213 1382 aa15.21■□□□□ 0.02
SHCBP1-207ENST00000569702 FLT4P35916 1363 aa15.21■□□□□ 0.02
SHCBP1-207ENST00000569702 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
SHCBP1-207ENST00000569702 ANKRD26Q9UPS8 1709 aa15.2■□□□□ 0.02
SHCBP1-207ENST00000569702 HSP90AB2PQ58FF8 381 aa15.2■□□□□ 0.02
SHCBP1-207ENST00000569702 AMER1Q5JTC6 1135 aaPredicted RBP15.2■□□□□ 0.02
SHCBP1-207ENST00000569702 LTV1Q96GA3 475 aaPredicted RBP15.2■□□□□ 0.02
SHCBP1-207ENST00000569702 LRRC37A3O60309 1634 aa15.2■□□□□ 0.02
SHCBP1-207ENST00000569702 FAM208AQ9UK61 1670 aaKnown RBP15.19■□□□□ 0.02
SHCBP1-207ENST00000569702 POLKQ9UBT6 870 aa15.19■□□□□ 0.02
SHCBP1-207ENST00000569702 IL2RBP14784 551 aa15.18■□□□□ 0.02
SHCBP1-207ENST00000569702 EXOC5O00471 708 aa15.17■□□□□ 0.02
SHCBP1-207ENST00000569702 NBPF6Q5VWK0 638 aa15.17■□□□□ 0.02
SHCBP1-207ENST00000569702 MARCH10Q8NA82 808 aaPredicted RBP15.17■□□□□ 0.02
SHCBP1-207ENST00000569702 NBPF4Q96M43 638 aa15.17■□□□□ 0.02
SHCBP1-207ENST00000569702 MAP2P11137 1827 aaKnown RBP15.17■□□□□ 0.02
SHCBP1-207ENST00000569702 TNNT2P45379 298 aaPredicted RBP15.16■□□□□ 0.02
SHCBP1-207ENST00000569702 SF3B2Q13435 895 aaKnown RBP15.16■□□□□ 0.02
SHCBP1-207ENST00000569702 DEFB132Q7Z7B7 95 aa15.16■□□□□ 0.02
SHCBP1-207ENST00000569702 MORC1Q86VD1 984 aa15.16■□□□□ 0.02
SHCBP1-207ENST00000569702 OVOS2A0A0G2JMS6 1433 aa15.16■□□□□ 0.02
SHCBP1-207ENST00000569702 BCL9O00512 1426 aa15.16■□□□□ 0.02
SHCBP1-207ENST00000569702 TNS2Q63HR2 1409 aa15.16■□□□□ 0.02
SHCBP1-207ENST00000569702 PPM1GO15355 546 aaPredicted RBP15.15■□□□□ 0.02
SHCBP1-207ENST00000569702 TRIM37O94972 964 aa15.15■□□□□ 0.02
SHCBP1-207ENST00000569702 SMG6Q86US8 1419 aaKnown RBP15.15■□□□□ 0.02
SHCBP1-207ENST00000569702 RGPD2P0DJD1 1756 aa15.14■□□□□ 0.01
SHCBP1-207ENST00000569702 RGPD1P0DJD0 1748 aa15.14■□□□□ 0.01
SHCBP1-207ENST00000569702 NPC1L1Q9UHC9 1359 aa15.13■□□□□ 0.01
SHCBP1-207ENST00000569702 TNS1Q9HBL0 1735 aaKnown RBP15.12■□□□□ 0.01
SHCBP1-207ENST00000569702 BAG6P46379 1132 aa15.12■□□□□ 0.01
SHCBP1-207ENST00000569702 NCAPD2Q15021 1401 aa15.11■□□□□ 0.01
SHCBP1-207ENST00000569702 USHBP1Q8N6Y0 703 aa15.11■□□□□ 0.01
SHCBP1-207ENST00000569702 MEGF6O75095 1541 aa15.11■□□□□ 0.01
SHCBP1-207ENST00000569702 EIF4A2Q14240 407 aaKnown RBP15.1■□□□□ 0.01
SHCBP1-207ENST00000569702 SBF2Q86WG5 1849 aa15.1■□□□□ 0.01
SHCBP1-207ENST00000569702 APBA3O96018 575 aa15.09■□□□□ 0.01
SHCBP1-207ENST00000569702 EN1Q05925 392 aaPredicted RBP15.09■□□□□ 0.01
SHCBP1-207ENST00000569702 CC2D1BQ5T0F9 858 aaKnown RBP15.09■□□□□ 0.01
SHCBP1-207ENST00000569702 CAMKK2Q96RR4 588 aa15.09■□□□□ 0.01
SHCBP1-207ENST00000569702 EYA1Q99502 592 aa15.09■□□□□ 0.01
SHCBP1-207ENST00000569702 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
SHCBP1-207ENST00000569702 PTF1AQ7RTS3 328 aa15.08■□□□□ 0
SHCBP1-207ENST00000569702 ZCRB1Q8TBF4 217 aaKnown RBP15.08■□□□□ 0
SHCBP1-207ENST00000569702 RAPGEF4Q8WZA2 1011 aa15.08■□□□□ 0
SHCBP1-207ENST00000569702 TATP17735 454 aaPredicted RBP15.07■□□□□ 0
SHCBP1-207ENST00000569702 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms