RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 IP6K1Q92551 441 aa16.78■□□□□ 0.28
EDC3-217ENST00000569606 LMO7Q8WWI1 1683 aa16.78■□□□□ 0.28
EDC3-217ENST00000569606 ZBTB7CA1YPR0 619 aa16.77■□□□□ 0.28
EDC3-217ENST00000569606 PNISRQ8TF01 805 aaKnown RBP16.77■□□□□ 0.28
EDC3-217ENST00000569606 HSP90AB2PQ58FF8 381 aa16.76■□□□□ 0.27
EDC3-217ENST00000569606 BLMP54132 1417 aaPredicted RBP16.76■□□□□ 0.27
EDC3-217ENST00000569606 COL14A1Q05707 1796 aaKnown RBP16.75■□□□□ 0.27
EDC3-217ENST00000569606 DIAPH1O60610 1272 aaKnown RBP16.75■□□□□ 0.27
EDC3-217ENST00000569606 RGPD1P0DJD0 1748 aa16.75■□□□□ 0.27
EDC3-217ENST00000569606 IL13P35225 146 aa16.74■□□□□ 0.27
EDC3-217ENST00000569606 EIF4A2Q14240 407 aaKnown RBP16.74■□□□□ 0.27
EDC3-217ENST00000569606 CHRNA2Q15822 529 aa16.74■□□□□ 0.27
EDC3-217ENST00000569606 PRDM11Q9NQV5 511 aa16.74■□□□□ 0.27
EDC3-217ENST00000569606 SPATA31A6Q5VVP1 1343 aa16.73■□□□□ 0.27
EDC3-217ENST00000569606 AXIN2Q9Y2T1 843 aa16.73■□□□□ 0.27
EDC3-217ENST00000569606 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
EDC3-217ENST00000569606 RGPD2P0DJD1 1756 aa16.72■□□□□ 0.27
EDC3-217ENST00000569606 NUTM2BA6NNL0 878 aaPredicted RBP16.72■□□□□ 0.27
EDC3-217ENST00000569606 NUTM2EB1AL46 878 aaPredicted RBP16.72■□□□□ 0.27
EDC3-217ENST00000569606 NUTM2AQ8IVF1 878 aaPredicted RBP16.72■□□□□ 0.27
EDC3-217ENST00000569606 FAM9BQ8IZU0 186 aa16.72■□□□□ 0.27
EDC3-217ENST00000569606 PLCH1Q4KWH8 1693 aa16.72■□□□□ 0.27
EDC3-217ENST00000569606 LRP6O75581 1613 aa16.71■□□□□ 0.27
EDC3-217ENST00000569606 FAM83GA6ND36 823 aa16.71■□□□□ 0.27
EDC3-217ENST00000569606 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
EDC3-217ENST00000569606 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
EDC3-217ENST00000569606 FAM208AQ9UK61 1670 aaKnown RBP16.7■□□□□ 0.26
EDC3-217ENST00000569606 ADAMTS2O95450 1211 aa16.7■□□□□ 0.26
EDC3-217ENST00000569606 COL5A2P05997 1499 aaPredicted RBP16.69■□□□□ 0.26
EDC3-217ENST00000569606 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
EDC3-217ENST00000569606 ANKRD24Q8TF21 1146 aa16.69■□□□□ 0.26
EDC3-217ENST00000569606 LTV1Q96GA3 475 aaPredicted RBP16.69■□□□□ 0.26
EDC3-217ENST00000569606 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
EDC3-217ENST00000569606 ERBB3P21860 1342 aa16.69■□□□□ 0.26
EDC3-217ENST00000569606 NRAPQ86VF7 1730 aa16.67■□□□□ 0.26
EDC3-217ENST00000569606 NWD2Q9ULI1 1742 aa16.67■□□□□ 0.26
EDC3-217ENST00000569606 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
EDC3-217ENST00000569606 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
EDC3-217ENST00000569606 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
EDC3-217ENST00000569606 EYA1Q99502 592 aa16.66■□□□□ 0.26
EDC3-217ENST00000569606 NCAPD2Q15021 1401 aa16.65■□□□□ 0.26
EDC3-217ENST00000569606 BTG4Q9NY30 223 aa16.65■□□□□ 0.26
EDC3-217ENST00000569606 SLIT2O94813 1529 aa16.65■□□□□ 0.26
EDC3-217ENST00000569606 NBPF6Q5VWK0 638 aa16.64■□□□□ 0.25
EDC3-217ENST00000569606 NBPF4Q96M43 638 aa16.64■□□□□ 0.25
EDC3-217ENST00000569606 WDR17Q8IZU2 1322 aa16.64■□□□□ 0.25
EDC3-217ENST00000569606 KDRP35968 1356 aa16.64■□□□□ 0.25
EDC3-217ENST00000569606 HMOX1P09601 288 aa16.63■□□□□ 0.25
EDC3-217ENST00000569606 RSPH6AQ9H0K4 717 aa16.63■□□□□ 0.25
EDC3-217ENST00000569606 FCHSD2O94868 740 aa16.62■□□□□ 0.25
EDC3-217ENST00000569606 CSB-PGBD3P0DP91 1061 aa16.62■□□□□ 0.25
EDC3-217ENST00000569606 SULT6B1Q6IMI4 303 aa16.62■□□□□ 0.25
EDC3-217ENST00000569606 AEBP1Q8IUX7 1158 aa16.62■□□□□ 0.25
EDC3-217ENST00000569606 EVA1CP58658 441 aa16.61■□□□□ 0.25
EDC3-217ENST00000569606 CCDC146Q8IYE0 955 aa16.61■□□□□ 0.25
EDC3-217ENST00000569606 USHBP1Q8N6Y0 703 aa16.61■□□□□ 0.25
EDC3-217ENST00000569606 C8orf37Q96NL8 207 aa16.61■□□□□ 0.25
EDC3-217ENST00000569606 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
EDC3-217ENST00000569606 STRN4Q9NRL3 753 aa16.61■□□□□ 0.25
EDC3-217ENST00000569606 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.61■□□□□ 0.25
EDC3-217ENST00000569606 NLRP2Q9NX02 1062 aa16.6■□□□□ 0.25
EDC3-217ENST00000569606 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
EDC3-217ENST00000569606 LARP1Q6PKG0 1096 aaKnown RBP16.59■□□□□ 0.25
EDC3-217ENST00000569606 FNBP4Q8N3X1 1017 aaPredicted RBP16.59■□□□□ 0.25
EDC3-217ENST00000569606 RUNDC1Q96C34 613 aa16.59■□□□□ 0.25
EDC3-217ENST00000569606 NGLY1Q96IV0 654 aa16.59■□□□□ 0.25
EDC3-217ENST00000569606 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
EDC3-217ENST00000569606 CRB1P82279 1406 aa16.59■□□□□ 0.25
EDC3-217ENST00000569606 MEX3CQ5U5Q3 659 aaKnown RBP16.58■□□□□ 0.24
EDC3-217ENST00000569606 TOM1L2Q6ZVM7 507 aa16.58■□□□□ 0.24
EDC3-217ENST00000569606 BCL9LQ86UU0 1499 aa16.58■□□□□ 0.24
EDC3-217ENST00000569606 CARD10Q9BWT7 1032 aa16.57■□□□□ 0.24
EDC3-217ENST00000569606 WNK3Q9BYP7 1800 aa16.56■□□□□ 0.24
EDC3-217ENST00000569606 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
EDC3-217ENST00000569606 APAF1O14727 1248 aa16.55■□□□□ 0.24
EDC3-217ENST00000569606 UNC5CLQ8IV45 518 aa16.55■□□□□ 0.24
EDC3-217ENST00000569606 PHACTR3Q96KR7 559 aa16.55■□□□□ 0.24
EDC3-217ENST00000569606 YTHDC1Q96MU7 727 aaKnown RBP16.55■□□□□ 0.24
EDC3-217ENST00000569606 PARP4Q9UKK3 1724 aaKnown RBP16.55■□□□□ 0.24
EDC3-217ENST00000569606 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
EDC3-217ENST00000569606 AFF2P51816 1311 aa16.54■□□□□ 0.24
EDC3-217ENST00000569606 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
EDC3-217ENST00000569606 TCP11L2Q8N4U5 519 aa16.54■□□□□ 0.24
EDC3-217ENST00000569606 USP21Q9UK80 565 aa16.54■□□□□ 0.24
EDC3-217ENST00000569606 MEGF6O75095 1541 aa16.54■□□□□ 0.24
EDC3-217ENST00000569606 SENP3-EIF4A1A0A087X0R7 540 aa16.53■□□□□ 0.24
EDC3-217ENST00000569606 NEFMP07197 916 aa16.53■□□□□ 0.24
EDC3-217ENST00000569606 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
EDC3-217ENST00000569606 SPATA31A5Q5VU36 1347 aa16.52■□□□□ 0.24
EDC3-217ENST00000569606 SPATA31A7Q8IWB4 1347 aa16.52■□□□□ 0.24
EDC3-217ENST00000569606 PLEKHG2Q9H7P9 1386 aa16.51■□□□□ 0.23
EDC3-217ENST00000569606 SPATA31A1Q5TZJ5 1347 aa16.51■□□□□ 0.23
EDC3-217ENST00000569606 TMPOP42166 694 aaKnown RBP16.51■□□□□ 0.23
EDC3-217ENST00000569606 VPS72Q15906 364 aa16.51■□□□□ 0.23
EDC3-217ENST00000569606 RAPGEF4Q8WZA2 1011 aa16.51■□□□□ 0.23
EDC3-217ENST00000569606 USP35Q9P2H5 1018 aa16.51■□□□□ 0.23
EDC3-217ENST00000569606 TATP17735 454 aaPredicted RBP16.5■□□□□ 0.23
EDC3-217ENST00000569606 NFE2L2Q16236 605 aa16.5■□□□□ 0.23
EDC3-217ENST00000569606 RRP7AQ9Y3A4 280 aaKnown RBP16.5■□□□□ 0.23
EDC3-217ENST00000569606 OVOS2A0A0G2JMS6 1433 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms