RNA–Protein interactions for RNA: ENST00000569395.5

SCAPER-222, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 558 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-222	ENST00000569395	SMPD1	P17405	629 aa		7.94	□□□□□ -1.14
SCAPER-222	ENST00000569395	SLC10A4	Q96EP9	437 aa		7.94	□□□□□ -1.14
SCAPER-222	ENST00000569395	UBTF	P17480	764 aa	Known RBP	7.93	□□□□□ -1.14
SCAPER-222	ENST00000569395	LOR	P23490	312 aa	Predicted RBP	7.93	□□□□□ -1.14
SCAPER-222	ENST00000569395	NR1H3	Q13133	447 aa		7.93	□□□□□ -1.14
SCAPER-222	ENST00000569395	ARID5B	Q14865	1188 aa		7.93	□□□□□ -1.14
SCAPER-222	ENST00000569395	ZSCAN1	Q8NBB4	408 aa		7.93	□□□□□ -1.14
SCAPER-222	ENST00000569395	COG6	Q9Y2V7	657 aa		7.93	□□□□□ -1.14
SCAPER-222	ENST00000569395	MAP4K5	Q9Y4K4	846 aa		7.93	□□□□□ -1.14
SCAPER-222	ENST00000569395	WASF2	Q9Y6W5	498 aa		7.93	□□□□□ -1.14
SCAPER-222	ENST00000569395	NACAD	O15069	1562 aa		7.93	□□□□□ -1.14
SCAPER-222	ENST00000569395	ADH1C	P00326	375 aa		7.92	□□□□□ -1.14
SCAPER-222	ENST00000569395	ABL2	P42684	1182 aa		7.92	□□□□□ -1.14
SCAPER-222	ENST00000569395	CDV3	Q9UKY7	258 aa	Known RBP	7.92	□□□□□ -1.14
SCAPER-222	ENST00000569395	RAD21	O60216	631 aa		7.91	□□□□□ -1.14
SCAPER-222	ENST00000569395	IRF5	Q13568	498 aa		7.91	□□□□□ -1.14
SCAPER-222	ENST00000569395	VASH1	Q7L8A9	365 aa	Predicted RBP	7.91	□□□□□ -1.14
SCAPER-222	ENST00000569395	AVP	P01185	164 aa		7.9	□□□□□ -1.14
SCAPER-222	ENST00000569395	DZIP3	Q86Y13	1208 aa	Known RBP	7.9	□□□□□ -1.14
SCAPER-222	ENST00000569395	POM121	Q96HA1	1249 aa		7.9	□□□□□ -1.14
SCAPER-222	ENST00000569395	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.9	□□□□□ -1.14
SCAPER-222	ENST00000569395	GRM5	P41594	1212 aa		7.89	□□□□□ -1.15
SCAPER-222	ENST00000569395	NR5A1	Q13285	461 aa		7.89	□□□□□ -1.15
SCAPER-222	ENST00000569395	NNT	Q13423	1086 aa		7.89	□□□□□ -1.15
SCAPER-222	ENST00000569395	NBPF20	Q3BBV1	942 aa		7.89	□□□□□ -1.15
SCAPER-222	ENST00000569395	GTF3C3	Q9Y5Q9	886 aa		7.89	□□□□□ -1.15
SCAPER-222	ENST00000569395	BICRA	Q9NZM4	1560 aa		7.88	□□□□□ -1.15
SCAPER-222	ENST00000569395	AXIN1	O15169	862 aa		7.88	□□□□□ -1.15
SCAPER-222	ENST00000569395	FSHR	P23945	695 aa		7.88	□□□□□ -1.15
SCAPER-222	ENST00000569395	WASHC4	Q2M389	1173 aa		7.88	□□□□□ -1.15
SCAPER-222	ENST00000569395	ZNF592	Q92610	1267 aa		7.88	□□□□□ -1.15
SCAPER-222	ENST00000569395	HPS1	Q92902	700 aa		7.88	□□□□□ -1.15
SCAPER-222	ENST00000569395	KCTD15	Q96SI1	283 aa	Predicted RBP	7.88	□□□□□ -1.15
SCAPER-222	ENST00000569395	PCDHB9	Q9Y5E1	797 aa		7.88	□□□□□ -1.15
SCAPER-222	ENST00000569395	MCCD1	P59942	119 aa	Predicted RBP	7.87	□□□□□ -1.15
SCAPER-222	ENST00000569395	VAC14	Q08AM6	782 aa		7.87	□□□□□ -1.15
SCAPER-222	ENST00000569395	CTC1	Q2NKJ3	1217 aa		7.87	□□□□□ -1.15
SCAPER-222	ENST00000569395	WWC1	Q8IX03	1113 aa		7.87	□□□□□ -1.15
SCAPER-222	ENST00000569395	KRTAP4-8	Q9BYQ9	185 aa		7.87	□□□□□ -1.15
SCAPER-222	ENST00000569395	KCTD17	Q8N5Z5	321 aa		7.86	□□□□□ -1.15
SCAPER-222	ENST00000569395	NR3C2	P08235	984 aa		7.85	□□□□□ -1.15
SCAPER-222	ENST00000569395	SMCP	P49901	116 aa	Predicted RBP	7.85	□□□□□ -1.15
SCAPER-222	ENST00000569395	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.85	□□□□□ -1.15
SCAPER-222	ENST00000569395	INTS6L	Q5JSJ4	861 aa	Known RBP	7.85	□□□□□ -1.15
SCAPER-222	ENST00000569395	XP32	Q5T750	250 aa		7.85	□□□□□ -1.15
SCAPER-222	ENST00000569395	CLUAP1	Q96AJ1	413 aa		7.85	□□□□□ -1.15
SCAPER-222	ENST00000569395	CECR2	Q9BXF3	1484 aa		7.85	□□□□□ -1.15
SCAPER-222	ENST00000569395	CCDC116	Q8IYX3	515 aa		7.84	□□□□□ -1.15
SCAPER-222	ENST00000569395	ESPN	B1AK53	854 aa		7.83	□□□□□ -1.16
SCAPER-222	ENST00000569395	SNRPB	P14678	240 aa	Known RBP	7.83	□□□□□ -1.16
SCAPER-222	ENST00000569395	WDR4	P57081	412 aa	Known RBP	7.83	□□□□□ -1.16
SCAPER-222	ENST00000569395	DHX9	Q08211	1270 aa	Known RBP	7.83	□□□□□ -1.16
SCAPER-222	ENST00000569395	SEPT12	Q8IYM1	358 aa		7.83	□□□□□ -1.16
SCAPER-222	ENST00000569395	KLF16	Q9BXK1	252 aa	Predicted RBP	7.83	□□□□□ -1.16
SCAPER-222	ENST00000569395		A6NJR5	290 aa		7.82	□□□□□ -1.16
SCAPER-222	ENST00000569395	GIGYF1	O75420	1035 aa	Predicted RBP	7.82	□□□□□ -1.16
SCAPER-222	ENST00000569395	TIMP2	P16035	220 aa		7.82	□□□□□ -1.16
SCAPER-222	ENST00000569395	SOX11	P35716	441 aa		7.82	□□□□□ -1.16
SCAPER-222	ENST00000569395	PROSER2	Q86WR7	435 aa	Predicted RBP	7.82	□□□□□ -1.16
SCAPER-222	ENST00000569395	EMILIN1	Q9Y6C2	1016 aa		7.82	□□□□□ -1.16
SCAPER-222	ENST00000569395	UNC13A	Q9UPW8	1703 aa		7.81	□□□□□ -1.16
SCAPER-222	ENST00000569395	CAPN5	O15484	640 aa	Predicted RBP	7.81	□□□□□ -1.16
SCAPER-222	ENST00000569395	ZIC2	O95409	532 aa	Predicted RBP	7.81	□□□□□ -1.16
SCAPER-222	ENST00000569395	GMPR	P36959	345 aa		7.81	□□□□□ -1.16
SCAPER-222	ENST00000569395	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	7.81	□□□□□ -1.16
SCAPER-222	ENST00000569395	ITPKC	Q96DU7	683 aa		7.81	□□□□□ -1.16
SCAPER-222	ENST00000569395	RAB15	P59190	212 aa		7.8	□□□□□ -1.16
SCAPER-222	ENST00000569395	SEMA3F	Q13275	785 aa		7.8	□□□□□ -1.16
SCAPER-222	ENST00000569395	RNF20	Q5VTR2	975 aa		7.8	□□□□□ -1.16
SCAPER-222	ENST00000569395	CCDC125	Q86Z20	511 aa		7.8	□□□□□ -1.16
SCAPER-222	ENST00000569395	FNBP4	Q8N3X1	1017 aa	Predicted RBP	7.8	□□□□□ -1.16
SCAPER-222	ENST00000569395	PGPEP1	Q9NXJ5	209 aa		7.8	□□□□□ -1.16
SCAPER-222	ENST00000569395	CC2D2A	Q9P2K1	1620 aa		7.79	□□□□□ -1.16
SCAPER-222	ENST00000569395	ERVH48-1	M5A8F1	160 aa		7.79	□□□□□ -1.16
SCAPER-222	ENST00000569395	ZFAND3	Q9H8U3	227 aa		7.79	□□□□□ -1.16
SCAPER-222	ENST00000569395	CEP126	Q9P2H0	1117 aa		7.79	□□□□□ -1.16
SCAPER-222	ENST00000569395	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.78	□□□□□ -1.16
SCAPER-222	ENST00000569395	KCNMA1	Q12791	1236 aa		7.78	□□□□□ -1.16
SCAPER-222	ENST00000569395	SLC16A10	Q8TF71	515 aa		7.78	□□□□□ -1.16
SCAPER-222	ENST00000569395	POM121C	A8CG34	1229 aa		7.77	□□□□□ -1.17
SCAPER-222	ENST00000569395	TRIM52	Q96A61	297 aa		7.77	□□□□□ -1.17
SCAPER-222	ENST00000569395	SHROOM4	Q9ULL8	1493 aa		7.76	□□□□□ -1.17
SCAPER-222	ENST00000569395	SLFNL1	Q499Z3	407 aa		7.76	□□□□□ -1.17
SCAPER-222	ENST00000569395	ZNF784	Q8NCA9	323 aa	Predicted RBP	7.76	□□□□□ -1.17
SCAPER-222	ENST00000569395	TRIM47	Q96LD4	638 aa		7.76	□□□□□ -1.17
SCAPER-222	ENST00000569395	ALG2	Q9H553	416 aa		7.76	□□□□□ -1.17
SCAPER-222	ENST00000569395	ATP13A2	Q9NQ11	1180 aa		7.76	□□□□□ -1.17
SCAPER-222	ENST00000569395	TMPRSS4	Q9NRS4	437 aa		7.76	□□□□□ -1.17
SCAPER-222	ENST00000569395	MYO15B	Q96JP2	1530 aa		7.75	□□□□□ -1.17
SCAPER-222	ENST00000569395	PHTF2	Q8N3S3	785 aa		7.75	□□□□□ -1.17
SCAPER-222	ENST00000569395	BMP1	P13497	986 aa		7.74	□□□□□ -1.17
SCAPER-222	ENST00000569395	GSK3A	P49840	483 aa		7.74	□□□□□ -1.17
SCAPER-222	ENST00000569395	MRPL14	Q6P1L8	145 aa	Known RBP	7.74	□□□□□ -1.17
SCAPER-222	ENST00000569395	RNF135	Q8IUD6	432 aa		7.74	□□□□□ -1.17
SCAPER-222	ENST00000569395	MEIOB	Q8N635	442 aa		7.74	□□□□□ -1.17
SCAPER-222	ENST00000569395	KRTAP9-2	Q9BYQ4	174 aa		7.74	□□□□□ -1.17
SCAPER-222	ENST00000569395	SENP2	Q9HC62	589 aa		7.74	□□□□□ -1.17
SCAPER-222	ENST00000569395	PCDHB11	Q9Y5F2	797 aa		7.74	□□□□□ -1.17
SCAPER-222	ENST00000569395	TRAK2	O60296	914 aa		7.73	□□□□□ -1.17
SCAPER-222	ENST00000569395	LILRA1	O75019	489 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms