RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 BRD4O60885 1362 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-210ENST00000569394 EDC4Q6P2E9 1401 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-210ENST00000569394 CAMTA1Q9Y6Y1 1673 aa12.51□□□□□ -0.41
GTF3C1-210ENST00000569394 KCNH5Q8NCM2 988 aa12.5□□□□□ -0.41
GTF3C1-210ENST00000569394 LTV1Q96GA3 475 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-210ENST00000569394 COG3Q96JB2 828 aa12.5□□□□□ -0.41
GTF3C1-210ENST00000569394 ANKRD36BQ8N2N9 1353 aa12.5□□□□□ -0.41
GTF3C1-210ENST00000569394 SLIT3O75094 1523 aa12.5□□□□□ -0.41
GTF3C1-210ENST00000569394 BRWD3Q6RI45 1802 aa12.49□□□□□ -0.41
GTF3C1-210ENST00000569394 MYOM1P52179 1685 aa12.49□□□□□ -0.41
GTF3C1-210ENST00000569394 TOM1L2Q6ZVM7 507 aa12.49□□□□□ -0.41
GTF3C1-210ENST00000569394 CARD14Q9BXL6 1004 aa12.49□□□□□ -0.41
GTF3C1-210ENST00000569394 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
GTF3C1-210ENST00000569394 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
GTF3C1-210ENST00000569394 TNNT2P45379 298 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-210ENST00000569394 ARHGEF25Q86VW2 580 aa12.48□□□□□ -0.41
GTF3C1-210ENST00000569394 PANK3Q9H999 370 aa12.48□□□□□ -0.41
GTF3C1-210ENST00000569394 CDK12Q9NYV4 1490 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-210ENST00000569394 NSD3Q9BZ95 1437 aa12.47□□□□□ -0.41
GTF3C1-210ENST00000569394 CPDO75976 1380 aa12.47□□□□□ -0.41
GTF3C1-210ENST00000569394 NINLQ9Y2I6 1382 aa12.47□□□□□ -0.41
GTF3C1-210ENST00000569394 SPATA31A1Q5TZJ5 1347 aa12.47□□□□□ -0.41
GTF3C1-210ENST00000569394 FYB1O15117 783 aa12.47□□□□□ -0.41
GTF3C1-210ENST00000569394 RRS1Q15050 365 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-210ENST00000569394 LTN1O94822 1766 aa12.47□□□□□ -0.41
GTF3C1-210ENST00000569394 LMO7Q8WWI1 1683 aa12.46□□□□□ -0.41
GTF3C1-210ENST00000569394 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.42
GTF3C1-210ENST00000569394 USP31Q70CQ4 1352 aa12.45□□□□□ -0.42
GTF3C1-210ENST00000569394 PPM1GO15355 546 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-210ENST00000569394 AMPHP49418 695 aa12.45□□□□□ -0.42
GTF3C1-210ENST00000569394 KRT27Q7Z3Y8 459 aa12.45□□□□□ -0.42
GTF3C1-210ENST00000569394 KIF20BQ96Q89 1820 aa12.45□□□□□ -0.42
GTF3C1-210ENST00000569394 NFAT5O94916 1531 aa12.45□□□□□ -0.42
GTF3C1-210ENST00000569394 COL18A1P39060 1754 aa12.45□□□□□ -0.42
GTF3C1-210ENST00000569394 AATKQ6ZMQ8 1374 aa12.44□□□□□ -0.42
GTF3C1-210ENST00000569394 KIF7Q2M1P5 1343 aa12.44□□□□□ -0.42
GTF3C1-210ENST00000569394 TCP11L2Q8N4U5 519 aa12.44□□□□□ -0.42
GTF3C1-210ENST00000569394 NLRP2Q9NX02 1062 aa12.44□□□□□ -0.42
GTF3C1-210ENST00000569394 OVOS2A0A0J9YW53 1432 aa12.44□□□□□ -0.42
GTF3C1-210ENST00000569394 OVOS2Q6IE36 1432 aa12.44□□□□□ -0.42
GTF3C1-210ENST00000569394 ANKRD24Q8TF21 1146 aa12.43□□□□□ -0.42
GTF3C1-210ENST00000569394 PDE3BQ13370 1112 aa12.42□□□□□ -0.42
GTF3C1-210ENST00000569394 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-210ENST00000569394 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
GTF3C1-210ENST00000569394 WDR17Q8IZU2 1322 aa12.41□□□□□ -0.42
GTF3C1-210ENST00000569394 ONECUT3O60422 494 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-210ENST00000569394 CRB1P82279 1406 aa12.41□□□□□ -0.42
GTF3C1-210ENST00000569394 CGNL1Q0VF96 1302 aa12.4□□□□□ -0.42
GTF3C1-210ENST00000569394 HOXC9P31274 260 aa12.4□□□□□ -0.42
GTF3C1-210ENST00000569394 EMILIN1Q9Y6C2 1016 aa12.4□□□□□ -0.42
GTF3C1-210ENST00000569394 USP54Q70EL1 1684 aa12.39□□□□□ -0.43
GTF3C1-210ENST00000569394 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
GTF3C1-210ENST00000569394 FKBP8Q14318 412 aa12.39□□□□□ -0.43
GTF3C1-210ENST00000569394 USHBP1Q8N6Y0 703 aa12.39□□□□□ -0.43
GTF3C1-210ENST00000569394 IP6K1Q92551 441 aa12.39□□□□□ -0.43
GTF3C1-210ENST00000569394 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
GTF3C1-210ENST00000569394 SF3B2Q13435 895 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-210ENST00000569394 HSP90AB2PQ58FF8 381 aa12.38□□□□□ -0.43
GTF3C1-210ENST00000569394 CC2D1BQ5T0F9 858 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-210ENST00000569394 BARGINQ6ZT62 677 aa12.38□□□□□ -0.43
GTF3C1-210ENST00000569394 DEFB132Q7Z7B7 95 aa12.38□□□□□ -0.43
GTF3C1-210ENST00000569394 KNSTRNQ9Y448 316 aa12.38□□□□□ -0.43
GTF3C1-210ENST00000569394 THSD7AQ9UPZ6 1657 aa12.38□□□□□ -0.43
GTF3C1-210ENST00000569394 ERBB3P21860 1342 aa12.37□□□□□ -0.43
GTF3C1-210ENST00000569394 WASHC2AQ641Q2 1341 aa12.37□□□□□ -0.43
GTF3C1-210ENST00000569394 TRIM37O94972 964 aa12.37□□□□□ -0.43
GTF3C1-210ENST00000569394 DDB1Q16531 1140 aa12.37□□□□□ -0.43
GTF3C1-210ENST00000569394 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
GTF3C1-210ENST00000569394 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-210ENST00000569394 CCDC7Q96M83 1385 aa12.36□□□□□ -0.43
GTF3C1-210ENST00000569394 MORC1Q86VD1 984 aa12.36□□□□□ -0.43
GTF3C1-210ENST00000569394 THRAP3Q9Y2W1 955 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-210ENST00000569394 MAP2P11137 1827 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-210ENST00000569394 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
GTF3C1-210ENST00000569394 EXOC5O00471 708 aa12.34□□□□□ -0.43
GTF3C1-210ENST00000569394 WNK3Q9BYP7 1800 aa12.33□□□□□ -0.44
GTF3C1-210ENST00000569394 IL2RBP14784 551 aa12.33□□□□□ -0.44
GTF3C1-210ENST00000569394 EN1Q05925 392 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-210ENST00000569394 NBPF6Q5VWK0 638 aa12.33□□□□□ -0.44
GTF3C1-210ENST00000569394 DDX54Q8TDD1 881 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-210ENST00000569394 ACSBG1Q96GR2 724 aa12.33□□□□□ -0.44
GTF3C1-210ENST00000569394 NBPF4Q96M43 638 aa12.33□□□□□ -0.44
GTF3C1-210ENST00000569394 U3KPZ7 1027 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-210ENST00000569394 LRRC37A3O60309 1634 aa12.33□□□□□ -0.44
GTF3C1-210ENST00000569394 BLMP54132 1417 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-210ENST00000569394 FAM196AQ6ZSG2 479 aa12.32□□□□□ -0.44
GTF3C1-210ENST00000569394 MARCH10Q8NA82 808 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-210ENST00000569394 POLKQ9UBT6 870 aa12.32□□□□□ -0.44
GTF3C1-210ENST00000569394 PARP4Q9UKK3 1724 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-210ENST00000569394 ANKRD26Q9UPS8 1709 aa12.31□□□□□ -0.44
GTF3C1-210ENST00000569394 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
GTF3C1-210ENST00000569394 APBA3O96018 575 aa12.31□□□□□ -0.44
GTF3C1-210ENST00000569394 PTF1AQ7RTS3 328 aa12.31□□□□□ -0.44
GTF3C1-210ENST00000569394 EP400Q96L91 3159 aa12.31□□□□□ -0.44
GTF3C1-210ENST00000569394 FLT4P35916 1363 aa12.3□□□□□ -0.44
GTF3C1-210ENST00000569394 SMG6Q86US8 1419 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-210ENST00000569394 BAG6P46379 1132 aa12.3□□□□□ -0.44
GTF3C1-210ENST00000569394 CCDC125Q86Z20 511 aa12.3□□□□□ -0.44
GTF3C1-210ENST00000569394 ABCC6O95255 1503 aa12.29□□□□□ -0.44
GTF3C1-210ENST00000569394 EZH2Q15910 746 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms