RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 FBLN1P23142 703 aa17.78■□□□□ 0.44
CNOT1-217ENST00000569263 RRS1Q15050 365 aaKnown RBP17.78■□□□□ 0.44
CNOT1-217ENST00000569263 RTL1A6NKG5 1358 aa17.78■□□□□ 0.44
CNOT1-217ENST00000569263 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.44
CNOT1-217ENST00000569263 AMPHP49418 695 aa17.77■□□□□ 0.44
CNOT1-217ENST00000569263 STRN4Q9NRL3 753 aa17.77■□□□□ 0.44
CNOT1-217ENST00000569263 PEAK1Q9H792 1746 aa17.77■□□□□ 0.44
CNOT1-217ENST00000569263 COL5A2P05997 1499 aaPredicted RBP17.76■□□□□ 0.43
CNOT1-217ENST00000569263 EVA1CP58658 441 aa17.76■□□□□ 0.43
CNOT1-217ENST00000569263 RGS17Q9UGC6 210 aaPredicted RBP17.76■□□□□ 0.43
CNOT1-217ENST00000569263 TRPC5Q9UL62 973 aaPredicted RBP17.76■□□□□ 0.43
CNOT1-217ENST00000569263 ATRNO75882 1429 aa17.75■□□□□ 0.43
CNOT1-217ENST00000569263 BLMP54132 1417 aaPredicted RBP17.75■□□□□ 0.43
CNOT1-217ENST00000569263 FAM208AQ9UK61 1670 aaKnown RBP17.75■□□□□ 0.43
CNOT1-217ENST00000569263 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
CNOT1-217ENST00000569263 QTRT2Q9H974 415 aaKnown RBP17.74■□□□□ 0.43
CNOT1-217ENST00000569263 FLT4P35916 1363 aa17.74■□□□□ 0.43
CNOT1-217ENST00000569263 KIF24Q5T7B8 1368 aa17.74■□□□□ 0.43
CNOT1-217ENST00000569263 PPM1GO15355 546 aaPredicted RBP17.73■□□□□ 0.43
CNOT1-217ENST00000569263 HOXC9P31274 260 aa17.73■□□□□ 0.43
CNOT1-217ENST00000569263 IP6K1Q92551 441 aa17.73■□□□□ 0.43
CNOT1-217ENST00000569263 AXIN2Q9Y2T1 843 aa17.73■□□□□ 0.43
CNOT1-217ENST00000569263 EMILIN1Q9Y6C2 1016 aa17.73■□□□□ 0.43
CNOT1-217ENST00000569263 CSB-PGBD3P0DP91 1061 aa17.72■□□□□ 0.43
CNOT1-217ENST00000569263 VPS72Q15906 364 aa17.72■□□□□ 0.43
CNOT1-217ENST00000569263 POTEAQ6S8J7 498 aa17.72■□□□□ 0.43
CNOT1-217ENST00000569263 SMG6Q86US8 1419 aaKnown RBP17.72■□□□□ 0.43
CNOT1-217ENST00000569263 GLI3P10071 1580 aa17.71■□□□□ 0.43
CNOT1-217ENST00000569263 POLKQ9UBT6 870 aa17.7■□□□□ 0.42
CNOT1-217ENST00000569263 CRB1P82279 1406 aa17.7■□□□□ 0.42
CNOT1-217ENST00000569263 ERBB3P21860 1342 aa17.7■□□□□ 0.42
CNOT1-217ENST00000569263 WDR17Q8IZU2 1322 aa17.7■□□□□ 0.42
CNOT1-217ENST00000569263 CDK12Q9NYV4 1490 aaPredicted RBP17.69■□□□□ 0.42
CNOT1-217ENST00000569263 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
CNOT1-217ENST00000569263 LARP1Q6PKG0 1096 aaKnown RBP17.69■□□□□ 0.42
CNOT1-217ENST00000569263 TOM1L2Q6ZVM7 507 aa17.69■□□□□ 0.42
CNOT1-217ENST00000569263 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
CNOT1-217ENST00000569263 LTV1Q96GA3 475 aaPredicted RBP17.69■□□□□ 0.42
CNOT1-217ENST00000569263 GJD4Q96KN9 370 aaPredicted RBP17.69■□□□□ 0.42
CNOT1-217ENST00000569263 RGPD2P0DJD1 1756 aa17.68■□□□□ 0.42
CNOT1-217ENST00000569263 INSRP06213 1382 aa17.68■□□□□ 0.42
CNOT1-217ENST00000569263 WNK3Q9BYP7 1800 aa17.68■□□□□ 0.42
CNOT1-217ENST00000569263 RXRBP28702 533 aa17.68■□□□□ 0.42
CNOT1-217ENST00000569263 SPATA31A5Q5VU36 1347 aa17.68■□□□□ 0.42
CNOT1-217ENST00000569263 SPATA31A7Q8IWB4 1347 aa17.68■□□□□ 0.42
CNOT1-217ENST00000569263 PARD3Q8TEW0 1356 aa17.67■□□□□ 0.42
CNOT1-217ENST00000569263 HSP90AB2PQ58FF8 381 aa17.67■□□□□ 0.42
CNOT1-217ENST00000569263 USP35Q9P2H5 1018 aa17.67■□□□□ 0.42
CNOT1-217ENST00000569263 SPATA31A1Q5TZJ5 1347 aa17.66■□□□□ 0.42
CNOT1-217ENST00000569263 NLRP2Q9NX02 1062 aa17.65■□□□□ 0.42
CNOT1-217ENST00000569263 A0A0G2JS52 829 aa17.64■□□□□ 0.41
CNOT1-217ENST00000569263 MTHFSP49914 203 aa17.64■□□□□ 0.41
CNOT1-217ENST00000569263 MYT1Q01538 1121 aa17.64■□□□□ 0.41
CNOT1-217ENST00000569263 PPP2R1AP30153 589 aa17.63■□□□□ 0.41
CNOT1-217ENST00000569263 RALBP1Q15311 655 aa17.63■□□□□ 0.41
CNOT1-217ENST00000569263 TCP11L2Q8N4U5 519 aa17.63■□□□□ 0.41
CNOT1-217ENST00000569263 CARD10Q9BWT7 1032 aa17.63■□□□□ 0.41
CNOT1-217ENST00000569263 RGS12O14924 1447 aa17.63■□□□□ 0.41
CNOT1-217ENST00000569263 THSD7AQ9UPZ6 1657 aa17.62■□□□□ 0.41
CNOT1-217ENST00000569263 FAM98CQ17RN3 349 aaKnown RBP17.62■□□□□ 0.41
CNOT1-217ENST00000569263 THRAP3Q9Y2W1 955 aaKnown RBP17.62■□□□□ 0.41
CNOT1-217ENST00000569263 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
CNOT1-217ENST00000569263 PARP4Q9UKK3 1724 aaKnown RBP17.6■□□□□ 0.41
CNOT1-217ENST00000569263 BRWD3Q6RI45 1802 aa17.59■□□□□ 0.41
CNOT1-217ENST00000569263 EIF4A2Q14240 407 aaKnown RBP17.59■□□□□ 0.41
CNOT1-217ENST00000569263 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
CNOT1-217ENST00000569263 LRRC37A3O60309 1634 aa17.58■□□□□ 0.41
CNOT1-217ENST00000569263 COL3A1P02461 1466 aaPredicted RBP17.58■□□□□ 0.41
CNOT1-217ENST00000569263 MYBBP1AQ9BQG0 1328 aaKnown RBP17.58■□□□□ 0.4
CNOT1-217ENST00000569263 PRKRIP1Q9H875 184 aaPredicted RBP17.58■□□□□ 0.4
CNOT1-217ENST00000569263 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
CNOT1-217ENST00000569263 USHBP1Q8N6Y0 703 aa17.57■□□□□ 0.4
CNOT1-217ENST00000569263 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
CNOT1-217ENST00000569263 RGPD1P0DJD0 1748 aa17.57■□□□□ 0.4
CNOT1-217ENST00000569263 ANP32CO43423 234 aa17.56■□□□□ 0.4
CNOT1-217ENST00000569263 DIAPH1O60610 1272 aaKnown RBP17.56■□□□□ 0.4
CNOT1-217ENST00000569263 SEPT12Q8IYM1 358 aa17.56■□□□□ 0.4
CNOT1-217ENST00000569263 CDCA7Q9BWT1 371 aaPredicted RBP17.56■□□□□ 0.4
CNOT1-217ENST00000569263 DISP2A7MBM2 1401 aa17.55■□□□□ 0.4
CNOT1-217ENST00000569263 ONECUT3O60422 494 aaPredicted RBP17.55■□□□□ 0.4
CNOT1-217ENST00000569263 IL2RBP14784 551 aa17.55■□□□□ 0.4
CNOT1-217ENST00000569263 EYA1Q99502 592 aa17.54■□□□□ 0.4
CNOT1-217ENST00000569263 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
CNOT1-217ENST00000569263 IL13P35225 146 aa17.53■□□□□ 0.4
CNOT1-217ENST00000569263 RAPGEF4Q8WZA2 1011 aa17.53■□□□□ 0.4
CNOT1-217ENST00000569263 NCAPD2Q15021 1401 aa17.53■□□□□ 0.4
CNOT1-217ENST00000569263 MEGF6O75095 1541 aa17.52■□□□□ 0.4
CNOT1-217ENST00000569263 DDB1Q16531 1140 aa17.52■□□□□ 0.4
CNOT1-217ENST00000569263 ILDR2Q71H61 639 aa17.52■□□□□ 0.4
CNOT1-217ENST00000569263 TNS2Q63HR2 1409 aa17.52■□□□□ 0.4
CNOT1-217ENST00000569263 U2SURPO15042 1029 aaKnown RBP17.51■□□□□ 0.39
CNOT1-217ENST00000569263 TATP17735 454 aaPredicted RBP17.51■□□□□ 0.39
CNOT1-217ENST00000569263 NUDCQ9Y266 331 aa17.51■□□□□ 0.39
CNOT1-217ENST00000569263 OVOS2A0A0G2JMS6 1433 aa17.5■□□□□ 0.39
CNOT1-217ENST00000569263 PDE3BQ13370 1112 aa17.5■□□□□ 0.39
CNOT1-217ENST00000569263 PKD1L3Q7Z443 1732 aa17.5■□□□□ 0.39
CNOT1-217ENST00000569263 KRT27Q7Z3Y8 459 aa17.49■□□□□ 0.39
CNOT1-217ENST00000569263 SHANK3Q9BYB0 1731 aa17.49■□□□□ 0.39
CNOT1-217ENST00000569263 EXOC5O00471 708 aa17.48■□□□□ 0.39
CNOT1-217ENST00000569263 SULT6B1Q6IMI4 303 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms