RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	CCDC102A	Q96A19	550 aa		9.49	□□□□□ -0.89
UBR1-209	ENST00000569243	ENAM	Q9NRM1	1142 aa		9.49	□□□□□ -0.89
UBR1-209	ENST00000569243	MINK1	Q8N4C8	1332 aa	Predicted RBP	9.49	□□□□□ -0.89
UBR1-209	ENST00000569243	CBLB	Q13191	982 aa		9.48	□□□□□ -0.89
UBR1-209	ENST00000569243	VASH1	Q7L8A9	365 aa	Predicted RBP	9.48	□□□□□ -0.89
UBR1-209	ENST00000569243	KDM2A	Q9Y2K7	1162 aa		9.48	□□□□□ -0.89
UBR1-209	ENST00000569243	SPINT1	O43278	529 aa		9.47	□□□□□ -0.89
UBR1-209	ENST00000569243	CCDC116	Q8IYX3	515 aa		9.47	□□□□□ -0.89
UBR1-209	ENST00000569243	F12	P00748	615 aa	Predicted RBP	9.46	□□□□□ -0.9
UBR1-209	ENST00000569243	BEND7	Q8N7W2	519 aa	Predicted RBP	9.45	□□□□□ -0.9
UBR1-209	ENST00000569243	KRTAP1-3	Q8IUG1	177 aa		9.44	□□□□□ -0.9
UBR1-209	ENST00000569243	C1QTNF2	Q9BXJ5	285 aa		9.44	□□□□□ -0.9
UBR1-209	ENST00000569243	CFAP99	D6REC4	459 aa		9.43	□□□□□ -0.9
UBR1-209	ENST00000569243	CTSO	P43234	321 aa	Predicted RBP	9.43	□□□□□ -0.9
UBR1-209	ENST00000569243	GAS6	Q14393	721 aa		9.43	□□□□□ -0.9
UBR1-209	ENST00000569243	PODN	Q7Z5L7	613 aa		9.43	□□□□□ -0.9
UBR1-209	ENST00000569243	MAP4K5	Q9Y4K4	846 aa		9.43	□□□□□ -0.9
UBR1-209	ENST00000569243	SSTR3	P32745	418 aa	Predicted RBP	9.42	□□□□□ -0.9
UBR1-209	ENST00000569243		Q6ZVU0	165 aa		9.42	□□□□□ -0.9
UBR1-209	ENST00000569243	BAG6	P46379	1132 aa		9.41	□□□□□ -0.9
UBR1-209	ENST00000569243	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	9.41	□□□□□ -0.9
UBR1-209	ENST00000569243	NEDD1	Q8NHV4	660 aa		9.41	□□□□□ -0.9
UBR1-209	ENST00000569243	SENP3-EIF4A1	A0A087X0R7	540 aa		9.4	□□□□□ -0.9
UBR1-209	ENST00000569243	AGBL1	Q96MI9	1066 aa		9.4	□□□□□ -0.9
UBR1-209	ENST00000569243	INSM2	Q96T92	566 aa	Predicted RBP	9.4	□□□□□ -0.9
UBR1-209	ENST00000569243	PGPEP1	Q9NXJ5	209 aa		9.4	□□□□□ -0.9
UBR1-209	ENST00000569243	MAGEB6P1	A0A0J9YX57	407 aa		9.39	□□□□□ -0.91
UBR1-209	ENST00000569243	FURIN	P09958	794 aa		9.39	□□□□□ -0.91
UBR1-209	ENST00000569243	RELB	Q01201	579 aa		9.38	□□□□□ -0.91
UBR1-209	ENST00000569243	TRMT44	Q8IYL2	757 aa	Known RBP	9.38	□□□□□ -0.91
UBR1-209	ENST00000569243	POLM	Q9NP87	494 aa	Predicted RBP	9.38	□□□□□ -0.91
UBR1-209	ENST00000569243	CUEDC1	Q9NWM3	386 aa	Predicted RBP	9.38	□□□□□ -0.91
UBR1-209	ENST00000569243	TULP1	O00294	542 aa	Predicted RBP	9.37	□□□□□ -0.91
UBR1-209	ENST00000569243	PER1	O15534	1290 aa	Predicted RBP	9.37	□□□□□ -0.91
UBR1-209	ENST00000569243	PCDHB15	Q9Y5E8	787 aa		9.37	□□□□□ -0.91
UBR1-209	ENST00000569243	BCR	P11274	1271 aa		9.35	□□□□□ -0.91
UBR1-209	ENST00000569243	RNF217	Q8TC41	542 aa		9.35	□□□□□ -0.91
UBR1-209	ENST00000569243	CARD14	Q9BXL6	1004 aa		9.35	□□□□□ -0.91
UBR1-209	ENST00000569243	HRC	P23327	699 aa		9.34	□□□□□ -0.91
UBR1-209	ENST00000569243	SH3BP5L	Q7L8J4	393 aa		9.34	□□□□□ -0.91
UBR1-209	ENST00000569243	ARMC2	Q8NEN0	867 aa		9.34	□□□□□ -0.91
UBR1-209	ENST00000569243	MBIP	Q9NS73	344 aa		9.34	□□□□□ -0.91
UBR1-209	ENST00000569243	IGF1R	P08069	1367 aa		9.34	□□□□□ -0.91
UBR1-209	ENST00000569243	KRBA1	A5PL33	1030 aa		9.33	□□□□□ -0.92
UBR1-209	ENST00000569243	ZNF395	Q9H8N7	513 aa	Predicted RBP	9.33	□□□□□ -0.92
UBR1-209	ENST00000569243	GPR25	O00155	361 aa		9.32	□□□□□ -0.92
UBR1-209	ENST00000569243	NBPF14	Q5TI25	921 aa		9.32	□□□□□ -0.92
UBR1-209	ENST00000569243	RSBN1L	Q6PCB5	846 aa	Predicted RBP	9.32	□□□□□ -0.92
UBR1-209	ENST00000569243	TSC1	Q92574	1164 aa		9.31	□□□□□ -0.92
UBR1-209	ENST00000569243	ACD	Q96AP0	544 aa		9.31	□□□□□ -0.92
UBR1-209	ENST00000569243	ZBTB3	Q9H5J0	574 aa		9.31	□□□□□ -0.92
UBR1-209	ENST00000569243	GJA5	P36382	358 aa		9.3	□□□□□ -0.92
UBR1-209	ENST00000569243	CABLES1	Q8TDN4	633 aa		9.3	□□□□□ -0.92
UBR1-209	ENST00000569243	ERFE	Q4G0M1	354 aa		9.29	□□□□□ -0.92
UBR1-209	ENST00000569243	BEGAIN	Q9BUH8	593 aa		9.29	□□□□□ -0.92
UBR1-209	ENST00000569243	TBC1D2	Q9BYX2	928 aa		9.29	□□□□□ -0.92
UBR1-209	ENST00000569243	LCE3B	Q5TA77	95 aa		9.28	□□□□□ -0.92
UBR1-209	ENST00000569243	ZNF837	Q96EG3	531 aa	Predicted RBP	9.28	□□□□□ -0.92
UBR1-209	ENST00000569243	TTLL12	Q14166	644 aa	Predicted RBP	9.27	□□□□□ -0.93
UBR1-209	ENST00000569243	FOXD4L5	Q5VV16	416 aa	Predicted RBP	9.27	□□□□□ -0.93
UBR1-209	ENST00000569243	KCTD15	Q96SI1	283 aa	Predicted RBP	9.27	□□□□□ -0.93
UBR1-209	ENST00000569243	SNRPN	P63162	240 aa	Known RBP	9.26	□□□□□ -0.93
UBR1-209	ENST00000569243	DHX9	Q08211	1270 aa	Known RBP	9.26	□□□□□ -0.93
UBR1-209	ENST00000569243	CSPP1	Q1MSJ5	1256 aa		9.26	□□□□□ -0.93
UBR1-209	ENST00000569243	FOXR1	Q6PIV2	292 aa		9.25	□□□□□ -0.93
UBR1-209	ENST00000569243	LYSMD3	Q7Z3D4	306 aa		9.25	□□□□□ -0.93
UBR1-209	ENST00000569243	PRPF38B	Q5VTL8	546 aa	Known RBP	9.24	□□□□□ -0.93
UBR1-209	ENST00000569243	RHOQ	P17081	205 aa		9.23	□□□□□ -0.93
UBR1-209	ENST00000569243	TRIM22	Q8IYM9	498 aa		9.23	□□□□□ -0.93
UBR1-209	ENST00000569243	DIXDC1	Q155Q3	683 aa		9.22	□□□□□ -0.93
UBR1-209	ENST00000569243	DBN1	Q16643	649 aa		9.22	□□□□□ -0.93
UBR1-209	ENST00000569243	GIGYF2	Q6Y7W6	1299 aa	Known RBP	9.22	□□□□□ -0.93
UBR1-209	ENST00000569243	PRICKLE2	Q7Z3G6	844 aa		9.22	□□□□□ -0.93
UBR1-209	ENST00000569243	OIP5	O43482	229 aa		9.21	□□□□□ -0.94
UBR1-209	ENST00000569243	COL8A1	P27658	744 aa		9.21	□□□□□ -0.94
UBR1-209	ENST00000569243	INTS6L	Q5JSJ4	861 aa	Known RBP	9.21	□□□□□ -0.94
UBR1-209	ENST00000569243	RIPOR1	Q6ZS17	1223 aa		9.21	□□□□□ -0.94
UBR1-209	ENST00000569243	RIC3	Q7Z5B4	369 aa		9.21	□□□□□ -0.94
UBR1-209	ENST00000569243	GTPBP3	Q969Y2	492 aa	Known RBP	9.21	□□□□□ -0.94
UBR1-209	ENST00000569243	SLC10A4	Q96EP9	437 aa		9.21	□□□□□ -0.94
UBR1-209	ENST00000569243	GMCL1	Q96IK5	515 aa		9.21	□□□□□ -0.94
UBR1-209	ENST00000569243	LRRC4B	Q9NT99	713 aa		9.21	□□□□□ -0.94
UBR1-209	ENST00000569243	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	9.2	□□□□□ -0.94
UBR1-209	ENST00000569243	KRTAP4-12	Q9BQ66	201 aa		9.2	□□□□□ -0.94
UBR1-209	ENST00000569243	TMPRSS4	Q9NRS4	437 aa		9.19	□□□□□ -0.94
UBR1-209	ENST00000569243	MKL2	Q9ULH7	1088 aa		9.19	□□□□□ -0.94
UBR1-209	ENST00000569243	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.18	□□□□□ -0.94
UBR1-209	ENST00000569243	NUTM2E	B1AL46	878 aa	Predicted RBP	9.18	□□□□□ -0.94
UBR1-209	ENST00000569243	ADH1A	P07327	375 aa		9.18	□□□□□ -0.94
UBR1-209	ENST00000569243	MX2	P20592	715 aa		9.18	□□□□□ -0.94
UBR1-209	ENST00000569243	ITGB7	P26010	798 aa		9.18	□□□□□ -0.94
UBR1-209	ENST00000569243	NUTM2D	Q5VT03	806 aa	Predicted RBP	9.18	□□□□□ -0.94
UBR1-209	ENST00000569243	ALYREF	Q86V81	257 aa	Known RBP	9.18	□□□□□ -0.94
UBR1-209	ENST00000569243	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.18	□□□□□ -0.94
UBR1-209	ENST00000569243	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	9.18	□□□□□ -0.94
UBR1-209	ENST00000569243	ARHGAP9	Q9BRR9	750 aa		9.18	□□□□□ -0.94
UBR1-209	ENST00000569243	CDV3	Q9UKY7	258 aa	Known RBP	9.18	□□□□□ -0.94
UBR1-209	ENST00000569243	PTGIR	P43119	386 aa		9.17	□□□□□ -0.94
UBR1-209	ENST00000569243	TRERF1	Q96PN7	1200 aa		9.17	□□□□□ -0.94
UBR1-209	ENST00000569243	ADD1	P35611	737 aa	Known RBP	9.16	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms