RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 TIMELESSQ9UNS1 1208 aa22.02■■□□□ 1.12
SCAMP2-210ENST00000569124 CASZ1Q86V15 1759 aa22.01■■□□□ 1.11
SCAMP2-210ENST00000569124 AATKQ6ZMQ8 1374 aa22■■□□□ 1.11
SCAMP2-210ENST00000569124 KAT6BQ8WYB5 2073 aa22■■□□□ 1.11
SCAMP2-210ENST00000569124 LTN1O94822 1766 aa22■■□□□ 1.11
SCAMP2-210ENST00000569124 NLRP6P59044 892 aa22■■□□□ 1.11
SCAMP2-210ENST00000569124 ZEB1P37275 1124 aaPredicted RBP21.98■■□□□ 1.11
SCAMP2-210ENST00000569124 CABP1Q9NZU7 370 aa21.98■■□□□ 1.11
SCAMP2-210ENST00000569124 CPSF1Q10570 1443 aaKnown RBP21.97■■□□□ 1.11
SCAMP2-210ENST00000569124 USP54Q70EL1 1684 aa21.96■■□□□ 1.11
SCAMP2-210ENST00000569124 TOM1L2Q6ZVM7 507 aa21.96■■□□□ 1.11
SCAMP2-210ENST00000569124 EVC2Q86UK5 1308 aa21.96■■□□□ 1.11
SCAMP2-210ENST00000569124 L3MBTL2Q969R5 705 aa21.95■■□□□ 1.1
SCAMP2-210ENST00000569124 ABCC6O95255 1503 aa21.95■■□□□ 1.1
SCAMP2-210ENST00000569124 DDB1Q16531 1140 aa21.94■■□□□ 1.1
SCAMP2-210ENST00000569124 WDR17Q8IZU2 1322 aa21.93■■□□□ 1.1
SCAMP2-210ENST00000569124 PPP1R1BQ9UD71 204 aaPredicted RBP21.93■■□□□ 1.1
SCAMP2-210ENST00000569124 NHSQ6T4R5 1651 aa21.92■■□□□ 1.1
SCAMP2-210ENST00000569124 NFAT5O94916 1531 aa21.92■■□□□ 1.1
SCAMP2-210ENST00000569124 SPON1Q9HCB6 807 aa21.92■■□□□ 1.1
SCAMP2-210ENST00000569124 MYOM1P52179 1685 aa21.91■■□□□ 1.1
SCAMP2-210ENST00000569124 ROCK2O75116 1388 aaKnown RBP21.9■■□□□ 1.1
SCAMP2-210ENST00000569124 NINLQ9Y2I6 1382 aa21.89■■□□□ 1.1
SCAMP2-210ENST00000569124 PLSCR1O15162 318 aa21.89■■□□□ 1.09
SCAMP2-210ENST00000569124 KCNQ2O43526 872 aa21.89■■□□□ 1.09
SCAMP2-210ENST00000569124 KCNH5Q8NCM2 988 aa21.89■■□□□ 1.09
SCAMP2-210ENST00000569124 CDCA7Q9BWT1 371 aaPredicted RBP21.89■■□□□ 1.09
SCAMP2-210ENST00000569124 TTC21AQ8NDW8 1320 aa21.88■■□□□ 1.09
SCAMP2-210ENST00000569124 BCL9O00512 1426 aa21.88■■□□□ 1.09
SCAMP2-210ENST00000569124 BTAF1O14981 1849 aa21.87■■□□□ 1.09
SCAMP2-210ENST00000569124 TTC21BQ7Z4L5 1316 aa21.87■■□□□ 1.09
SCAMP2-210ENST00000569124 CHD4Q14839 1912 aa21.87■■□□□ 1.09
SCAMP2-210ENST00000569124 ZNF692Q9BU19 519 aaPredicted RBP21.87■■□□□ 1.09
SCAMP2-210ENST00000569124 SOX12O15370 315 aa21.86■■□□□ 1.09
SCAMP2-210ENST00000569124 CSB-PGBD3P0DP91 1061 aa21.86■■□□□ 1.09
SCAMP2-210ENST00000569124 ARHGEF25Q86VW2 580 aa21.86■■□□□ 1.09
SCAMP2-210ENST00000569124 BCL11BQ9C0K0 894 aaPredicted RBP21.86■■□□□ 1.09
SCAMP2-210ENST00000569124 AXIN2Q9Y2T1 843 aa21.86■■□□□ 1.09
SCAMP2-210ENST00000569124 TNS2Q63HR2 1409 aa21.85■■□□□ 1.09
SCAMP2-210ENST00000569124 KTN1Q86UP2 1357 aaKnown RBP21.85■■□□□ 1.09
SCAMP2-210ENST00000569124 FAM208AQ9UK61 1670 aaKnown RBP21.85■■□□□ 1.09
SCAMP2-210ENST00000569124 DCAF8L1A6NGE4 600 aa21.84■■□□□ 1.09
SCAMP2-210ENST00000569124 YY1P25490 414 aa21.84■■□□□ 1.09
SCAMP2-210ENST00000569124 ANO8Q9HCE9 1232 aaPredicted RBP21.84■■□□□ 1.09
SCAMP2-210ENST00000569124 CCDC7Q96M83 1385 aa21.84■■□□□ 1.09
SCAMP2-210ENST00000569124 MARCH10Q8NA82 808 aaPredicted RBP21.83■■□□□ 1.09
SCAMP2-210ENST00000569124 CARD10Q9BWT7 1032 aa21.83■■□□□ 1.09
SCAMP2-210ENST00000569124 PTF1AQ7RTS3 328 aa21.81■■□□□ 1.08
SCAMP2-210ENST00000569124 QSER1Q2KHR3 1735 aa21.78■■□□□ 1.08
SCAMP2-210ENST00000569124 SBNO2Q9Y2G9 1366 aa21.78■■□□□ 1.08
SCAMP2-210ENST00000569124 PAPPAQ13219 1627 aa21.78■■□□□ 1.08
SCAMP2-210ENST00000569124 EXOC5O00471 708 aa21.78■■□□□ 1.08
SCAMP2-210ENST00000569124 STK32BQ9NY57 414 aa21.76■■□□□ 1.07
SCAMP2-210ENST00000569124 USP31Q70CQ4 1352 aa21.75■■□□□ 1.07
SCAMP2-210ENST00000569124 TXNRD1Q16881 649 aa21.75■■□□□ 1.07
SCAMP2-210ENST00000569124 CD163L1Q9NR16 1453 aa21.75■■□□□ 1.07
SCAMP2-210ENST00000569124 RGPD2P0DJD1 1756 aa21.74■■□□□ 1.07
SCAMP2-210ENST00000569124 TUBGCP6Q96RT7 1819 aa21.74■■□□□ 1.07
SCAMP2-210ENST00000569124 ZBTB7AO95365 584 aa21.74■■□□□ 1.07
SCAMP2-210ENST00000569124 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.74■■□□□ 1.07
SCAMP2-210ENST00000569124 PROM2Q8N271 834 aa21.74■■□□□ 1.07
SCAMP2-210ENST00000569124 PDGFDQ9GZP0 370 aaPredicted RBP21.73■■□□□ 1.07
SCAMP2-210ENST00000569124 ERBB3P21860 1342 aa21.73■■□□□ 1.07
SCAMP2-210ENST00000569124 DOT1LQ8TEK3 1739 aa21.72■■□□□ 1.07
SCAMP2-210ENST00000569124 EDC4Q6P2E9 1401 aaKnown RBP21.71■■□□□ 1.07
SCAMP2-210ENST00000569124 SLC15A2Q16348 729 aa21.7■■□□□ 1.06
SCAMP2-210ENST00000569124 NLRP2Q9NX02 1062 aa21.7■■□□□ 1.06
SCAMP2-210ENST00000569124 SHANK3Q9BYB0 1731 aa21.69■■□□□ 1.06
SCAMP2-210ENST00000569124 HDGFL2Q7Z4V5 671 aaPredicted RBP21.69■■□□□ 1.06
SCAMP2-210ENST00000569124 NME9Q86XW9 330 aa21.69■■□□□ 1.06
SCAMP2-210ENST00000569124 IL2RBP14784 551 aa21.68■■□□□ 1.06
SCAMP2-210ENST00000569124 PTGER2P43116 358 aa21.68■■□□□ 1.06
SCAMP2-210ENST00000569124 TMC1Q8TDI8 760 aa21.68■■□□□ 1.06
SCAMP2-210ENST00000569124 ACSBG1Q96GR2 724 aa21.68■■□□□ 1.06
SCAMP2-210ENST00000569124 ATF5Q9Y2D1 282 aaPredicted RBP21.68■■□□□ 1.06
SCAMP2-210ENST00000569124 LY75O60449 1722 aa21.67■■□□□ 1.06
SCAMP2-210ENST00000569124 COL24A1Q17RW2 1714 aa21.67■■□□□ 1.06
SCAMP2-210ENST00000569124 CARD11Q9BXL7 1154 aa21.67■■□□□ 1.06
SCAMP2-210ENST00000569124 MTFR1LQ9H019 292 aa21.66■■□□□ 1.06
SCAMP2-210ENST00000569124 A0A1W2PP64 1363 aa21.65■■□□□ 1.06
SCAMP2-210ENST00000569124 ANKRD24Q8TF21 1146 aa21.65■■□□□ 1.06
SCAMP2-210ENST00000569124 KIF20BQ96Q89 1820 aa21.63■■□□□ 1.05
SCAMP2-210ENST00000569124 FHDC1Q9C0D6 1143 aaPredicted RBP21.62■■□□□ 1.05
SCAMP2-210ENST00000569124 TERF2IPQ9NYB0 399 aa21.62■■□□□ 1.05
SCAMP2-210ENST00000569124 SLC12A5Q9H2X9 1139 aa21.6■■□□□ 1.05
SCAMP2-210ENST00000569124 SYT17Q9BSW7 474 aa21.59■■□□□ 1.05
SCAMP2-210ENST00000569124 SGIP1Q9BQI5 828 aa21.58■■□□□ 1.05
SCAMP2-210ENST00000569124 UTRNP46939 3433 aa21.57■■□□□ 1.04
SCAMP2-210ENST00000569124 ARXQ96QS3 562 aa21.56■■□□□ 1.04
SCAMP2-210ENST00000569124 MAP3K5Q99683 1374 aa21.56■■□□□ 1.04
SCAMP2-210ENST00000569124 TAF1LQ8IZX4 1826 aa21.55■■□□□ 1.04
SCAMP2-210ENST00000569124 ZNF827Q17R98 1081 aa21.55■■□□□ 1.04
SCAMP2-210ENST00000569124 IP6K1Q92551 441 aa21.55■■□□□ 1.04
SCAMP2-210ENST00000569124 PUS7Q96PZ0 661 aaKnown RBP21.55■■□□□ 1.04
SCAMP2-210ENST00000569124 C5P01031 1676 aa21.55■■□□□ 1.04
SCAMP2-210ENST00000569124 LTV1Q96GA3 475 aaPredicted RBP21.54■■□□□ 1.04
SCAMP2-210ENST00000569124 USP47Q96K76 1375 aa21.53■■□□□ 1.04
SCAMP2-210ENST00000569124 EIF4G2P78344 907 aaKnown RBP eCLIP21.53■■□□□ 1.04
SCAMP2-210ENST00000569124 DDX54Q8TDD1 881 aaKnown RBP21.53■■□□□ 1.04
SCAMP2-210ENST00000569124 SLC27A3Q5K4L6 730 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms