RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 BARGINQ6ZT62 677 aa35.41■■■■□ 3.26
CCNF-205ENST00000569093 RGPD5Q99666 1765 aa35.41■■■■□ 3.26
CCNF-205ENST00000569093 USP54Q70EL1 1684 aa35.4■■■■□ 3.26
CCNF-205ENST00000569093 CRB1P82279 1406 aa35.38■■■■□ 3.25
CCNF-205ENST00000569093 TOM1L2Q6ZVM7 507 aa35.35■■■■□ 3.25
CCNF-205ENST00000569093 THRAP3Q9Y2W1 955 aaKnown RBP35.35■■■■□ 3.25
CCNF-205ENST00000569093 DEFB132Q7Z7B7 95 aa35.34■■■■□ 3.25
CCNF-205ENST00000569093 ANKRD36BQ8N2N9 1353 aa35.34■■■■□ 3.25
CCNF-205ENST00000569093 WDR17Q8IZU2 1322 aa35.32■■■■□ 3.25
CCNF-205ENST00000569093 SF3B2Q13435 895 aaKnown RBP35.32■■■■□ 3.24
CCNF-205ENST00000569093 CDCA8Q53HL2 280 aa35.32■■■■□ 3.24
CCNF-205ENST00000569093 OVOS2A0A0J9YW53 1432 aa35.31■■■■□ 3.24
CCNF-205ENST00000569093 OVOS2Q6IE36 1432 aa35.31■■■■□ 3.24
CCNF-205ENST00000569093 PDE3BQ13370 1112 aa35.29■■■■□ 3.24
CCNF-205ENST00000569093 LTN1O94822 1766 aa35.28■■■■□ 3.24
CCNF-205ENST00000569093 CSB-PGBD3P0DP91 1061 aa35.28■■■■□ 3.24
CCNF-205ENST00000569093 COG3Q96JB2 828 aa35.24■■■■□ 3.23
CCNF-205ENST00000569093 PARP4Q9UKK3 1724 aaKnown RBP35.23■■■■□ 3.23
CCNF-205ENST00000569093 HSPA5P11021 654 aaKnown RBP35.23■■■■□ 3.23
CCNF-205ENST00000569093 FAM196AQ6ZSG2 479 aa35.23■■■■□ 3.23
CCNF-205ENST00000569093 ABCC6O95255 1503 aa35.22■■■■□ 3.23
CCNF-205ENST00000569093 FBLN1P23142 703 aa35.22■■■■□ 3.23
CCNF-205ENST00000569093 EIF4G2P78344 907 aaKnown RBP eCLIP35.22■■■■□ 3.23
CCNF-205ENST00000569093 CARD10Q9BWT7 1032 aa35.22■■■■□ 3.23
CCNF-205ENST00000569093 MYOM1P52179 1685 aa35.21■■■■□ 3.23
CCNF-205ENST00000569093 FYB1O15117 783 aa35.2■■■■□ 3.23
CCNF-205ENST00000569093 TRIM37O94972 964 aa35.19■■■■□ 3.22
CCNF-205ENST00000569093 RGPD1P0DJD0 1748 aa35.19■■■■□ 3.22
CCNF-205ENST00000569093 GGNBP2Q9H3C7 697 aa35.19■■■■□ 3.22
CCNF-205ENST00000569093 CARD14Q9BXL6 1004 aa35.18■■■■□ 3.22
CCNF-205ENST00000569093 BAG6P46379 1132 aa35.17■■■■□ 3.22
CCNF-205ENST00000569093 POLR3GLQ9BT43 218 aa35.17■■■■□ 3.22
CCNF-205ENST00000569093 WNK3Q9BYP7 1800 aa35.16■■■■□ 3.22
CCNF-205ENST00000569093 ERBB3P21860 1342 aa35.16■■■■□ 3.22
CCNF-205ENST00000569093 LRRC37A3O60309 1634 aa35.15■■■■□ 3.22
CCNF-205ENST00000569093 EN1Q05925 392 aaPredicted RBP35.15■■■■□ 3.22
CCNF-205ENST00000569093 DDB1Q16531 1140 aa35.15■■■■□ 3.22
CCNF-205ENST00000569093 ANKRD24Q8TF21 1146 aa35.15■■■■□ 3.22
CCNF-205ENST00000569093 IP6K1Q92551 441 aa35.14■■■■□ 3.22
CCNF-205ENST00000569093 NLRP2Q9NX02 1062 aa35.14■■■■□ 3.22
CCNF-205ENST00000569093 TNS1Q9HBL0 1735 aaKnown RBP35.14■■■■□ 3.22
CCNF-205ENST00000569093 MAP3K19Q56UN5 1328 aa35.12■■■■□ 3.21
CCNF-205ENST00000569093 CDCA7Q9BWT1 371 aaPredicted RBP35.11■■■■□ 3.21
CCNF-205ENST00000569093 CCDC7Q96M83 1385 aa35.11■■■■□ 3.21
CCNF-205ENST00000569093 DISP2A7MBM2 1401 aa35.1■■■■□ 3.21
CCNF-205ENST00000569093 KIF20BQ96Q89 1820 aa35.09■■■■□ 3.21
CCNF-205ENST00000569093 LTV1Q96GA3 475 aaPredicted RBP35.09■■■■□ 3.21
CCNF-205ENST00000569093 NSD3Q9BZ95 1437 aa35.08■■■■□ 3.21
CCNF-205ENST00000569093 AMPHP49418 695 aa35.07■■■■□ 3.2
CCNF-205ENST00000569093 RRS1Q15050 365 aaKnown RBP35.07■■■■□ 3.2
CCNF-205ENST00000569093 APBA3O96018 575 aa35.06■■■■□ 3.2
CCNF-205ENST00000569093 HOXC9P31274 260 aa35.06■■■■□ 3.2
CCNF-205ENST00000569093 MARCH10Q8NA82 808 aaPredicted RBP35.06■■■■□ 3.2
CCNF-205ENST00000569093 PEAK1Q9H792 1746 aa35.06■■■■□ 3.2
CCNF-205ENST00000569093 EZH2Q15910 746 aaKnown RBP35.04■■■■□ 3.2
CCNF-205ENST00000569093 OVOS2A0A0G2JMS6 1433 aa35.04■■■■□ 3.2
CCNF-205ENST00000569093 EXOC5O00471 708 aa35.03■■■■□ 3.2
CCNF-205ENST00000569093 C11orf95C9JLR9 678 aaPredicted RBP35.02■■■■□ 3.2
CCNF-205ENST00000569093 CAMKK2Q96RR4 588 aa35.01■■■■□ 3.2
CCNF-205ENST00000569093 SBF2Q86WG5 1849 aa34.99■■■■□ 3.19
CCNF-205ENST00000569093 IL2RBP14784 551 aa34.98■■■■□ 3.19
CCNF-205ENST00000569093 PTF1AQ7RTS3 328 aa34.96■■■■□ 3.19
CCNF-205ENST00000569093 RGPD2P0DJD1 1756 aa34.95■■■■□ 3.19
CCNF-205ENST00000569093 RTL1A6NKG5 1358 aa34.94■■■■□ 3.18
CCNF-205ENST00000569093 TNS2Q63HR2 1409 aa34.94■■■■□ 3.18
CCNF-205ENST00000569093 FAM208AQ9UK61 1670 aaKnown RBP34.94■■■■□ 3.18
CCNF-205ENST00000569093 CGNL1Q0VF96 1302 aa34.93■■■■□ 3.18
CCNF-205ENST00000569093 PANK3Q9H999 370 aa34.93■■■■□ 3.18
CCNF-205ENST00000569093 PSDA5PKW4 1024 aaPredicted RBP34.91■■■■□ 3.18
CCNF-205ENST00000569093 HSP90AB2PQ58FF8 381 aa34.91■■■■□ 3.18
CCNF-205ENST00000569093 EMILIN1Q9Y6C2 1016 aa34.89■■■■□ 3.18
CCNF-205ENST00000569093 SRCAPQ6ZRS2 3230 aa34.89■■■■□ 3.18
CCNF-205ENST00000569093 BCL9O00512 1426 aa34.89■■■■□ 3.18
CCNF-205ENST00000569093 BCL11BQ9C0K0 894 aaPredicted RBP34.88■■■■□ 3.17
CCNF-205ENST00000569093 NBPF6Q5VWK0 638 aa34.87■■■■□ 3.17
CCNF-205ENST00000569093 NBPF4Q96M43 638 aa34.87■■■■□ 3.17
CCNF-205ENST00000569093 PARD3Q8TEW0 1356 aa34.87■■■■□ 3.17
CCNF-205ENST00000569093 INSRP06213 1382 aa34.85■■■■□ 3.17
CCNF-205ENST00000569093 FLT4P35916 1363 aa34.85■■■■□ 3.17
CCNF-205ENST00000569093 USHBP1Q8N6Y0 703 aa34.84■■■■□ 3.17
CCNF-205ENST00000569093 RREB1Q92766 1687 aa34.84■■■■□ 3.17
CCNF-205ENST00000569093 PPM1GO15355 546 aaPredicted RBP34.83■■■■□ 3.17
CCNF-205ENST00000569093 R3HDM1Q15032 1099 aaKnown RBP34.83■■■■□ 3.17
CCNF-205ENST00000569093 KCNQ2O43526 872 aa34.82■■■■□ 3.16
CCNF-205ENST00000569093 MAP2P11137 1827 aaKnown RBP34.82■■■■□ 3.16
CCNF-205ENST00000569093 KIF24Q5T7B8 1368 aa34.82■■■■□ 3.16
CCNF-205ENST00000569093 DDX54Q8TDD1 881 aaKnown RBP34.81■■■■□ 3.16
CCNF-205ENST00000569093 ACSBG1Q96GR2 724 aa34.81■■■■□ 3.16
CCNF-205ENST00000569093 TNNT2P45379 298 aaPredicted RBP34.8■■■■□ 3.16
CCNF-205ENST00000569093 SMG6Q86US8 1419 aaKnown RBP34.8■■■■□ 3.16
CCNF-205ENST00000569093 KIF7Q2M1P5 1343 aa34.8■■■■□ 3.16
CCNF-205ENST00000569093 NUP188Q5SRE5 1749 aa34.79■■■■□ 3.16
CCNF-205ENST00000569093 ANKRD26Q9UPS8 1709 aa34.79■■■■□ 3.16
CCNF-205ENST00000569093 PLSCR1O15162 318 aa34.79■■■■□ 3.16
CCNF-205ENST00000569093 MEGF6O75095 1541 aa34.77■■■■□ 3.16
CCNF-205ENST00000569093 POLKQ9UBT6 870 aa34.77■■■■□ 3.16
CCNF-205ENST00000569093 KAT6BQ8WYB5 2073 aa34.76■■■■□ 3.16
CCNF-205ENST00000569093 ZCRB1Q8TBF4 217 aaKnown RBP34.74■■■■□ 3.15
CCNF-205ENST00000569093 NHSQ6T4R5 1651 aa34.73■■■■□ 3.15
CCNF-205ENST00000569093 PROM2Q8N271 834 aa34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms