RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 DISP2A7MBM2 1401 aa23.38■■□□□ 1.33
CDR2-207ENST00000569045 APBA3O96018 575 aa23.37■■□□□ 1.33
CDR2-207ENST00000569045 CDCA7Q9BWT1 371 aaPredicted RBP23.37■■□□□ 1.33
CDR2-207ENST00000569045 AXIN2Q9Y2T1 843 aa23.37■■□□□ 1.33
CDR2-207ENST00000569045 USP31Q70CQ4 1352 aa23.37■■□□□ 1.33
CDR2-207ENST00000569045 NINLQ9Y2I6 1382 aa23.37■■□□□ 1.33
CDR2-207ENST00000569045 EDC4Q6P2E9 1401 aaKnown RBP23.36■■□□□ 1.33
CDR2-207ENST00000569045 DDB1Q16531 1140 aa23.36■■□□□ 1.33
CDR2-207ENST00000569045 COL18A1P39060 1754 aa23.36■■□□□ 1.33
CDR2-207ENST00000569045 PARP4Q9UKK3 1724 aaKnown RBP23.36■■□□□ 1.33
CDR2-207ENST00000569045 NME9Q86XW9 330 aa23.35■■□□□ 1.33
CDR2-207ENST00000569045 TNS1Q9HBL0 1735 aaKnown RBP23.35■■□□□ 1.33
CDR2-207ENST00000569045 CD163L1Q9NR16 1453 aa23.35■■□□□ 1.33
CDR2-207ENST00000569045 PARD3Q8TEW0 1356 aa23.34■■□□□ 1.33
CDR2-207ENST00000569045 NFAT5O94916 1531 aa23.33■■□□□ 1.33
CDR2-207ENST00000569045 TESK2Q96S53 571 aa23.33■■□□□ 1.33
CDR2-207ENST00000569045 CARD10Q9BWT7 1032 aa23.33■■□□□ 1.33
CDR2-207ENST00000569045 ABCC6O95255 1503 aa23.33■■□□□ 1.32
CDR2-207ENST00000569045 A0A1W2PP64 1363 aa23.32■■□□□ 1.32
CDR2-207ENST00000569045 EZH2Q15910 746 aaKnown RBP23.32■■□□□ 1.32
CDR2-207ENST00000569045 OVOS2A0A0G2JMS6 1433 aa23.32■■□□□ 1.32
CDR2-207ENST00000569045 OVOS2A0A0J9YW53 1432 aa23.32■■□□□ 1.32
CDR2-207ENST00000569045 OVOS2Q6IE36 1432 aa23.32■■□□□ 1.32
CDR2-207ENST00000569045 PSDA5PKW4 1024 aaPredicted RBP23.31■■□□□ 1.32
CDR2-207ENST00000569045 TMF1P82094 1093 aa23.3■■□□□ 1.32
CDR2-207ENST00000569045 CAMKK2Q96RR4 588 aa23.3■■□□□ 1.32
CDR2-207ENST00000569045 TIMELESSQ9UNS1 1208 aa23.3■■□□□ 1.32
CDR2-207ENST00000569045 RGPD5Q99666 1765 aa23.29■■□□□ 1.32
CDR2-207ENST00000569045 CCDC7Q96M83 1385 aa23.29■■□□□ 1.32
CDR2-207ENST00000569045 USP54Q70EL1 1684 aa23.29■■□□□ 1.32
CDR2-207ENST00000569045 USP47Q96K76 1375 aa23.28■■□□□ 1.32
CDR2-207ENST00000569045 PCGF6Q9BYE7 350 aa23.28■■□□□ 1.32
CDR2-207ENST00000569045 CDCA8Q53HL2 280 aa23.27■■□□□ 1.32
CDR2-207ENST00000569045 CLSPNQ9HAW4 1339 aa23.27■■□□□ 1.32
CDR2-207ENST00000569045 LRRC37A3O60309 1634 aa23.26■■□□□ 1.31
CDR2-207ENST00000569045 EXOC5O00471 708 aa23.26■■□□□ 1.31
CDR2-207ENST00000569045 R3HDM1Q15032 1099 aaKnown RBP23.26■■□□□ 1.31
CDR2-207ENST00000569045 NBPF14Q5TI25 921 aa23.25■■□□□ 1.31
CDR2-207ENST00000569045 COG3Q96JB2 828 aa23.25■■□□□ 1.31
CDR2-207ENST00000569045 NLRP2Q9NX02 1062 aa23.25■■□□□ 1.31
CDR2-207ENST00000569045 WNK3Q9BYP7 1800 aa23.24■■□□□ 1.31
CDR2-207ENST00000569045 ERBB3P21860 1342 aa23.24■■□□□ 1.31
CDR2-207ENST00000569045 LTN1O94822 1766 aa23.23■■□□□ 1.31
CDR2-207ENST00000569045 ANKRD24Q8TF21 1146 aa23.22■■□□□ 1.31
CDR2-207ENST00000569045 ANKRD36BQ8N2N9 1353 aa23.22■■□□□ 1.31
CDR2-207ENST00000569045 MARCH10Q8NA82 808 aaPredicted RBP23.21■■□□□ 1.31
CDR2-207ENST00000569045 BCL11BQ9C0K0 894 aaPredicted RBP23.21■■□□□ 1.31
CDR2-207ENST00000569045 PEAK1Q9H792 1746 aa23.2■■□□□ 1.3
CDR2-207ENST00000569045 LRP5O75197 1615 aa23.2■■□□□ 1.3
CDR2-207ENST00000569045 IL2RBP14784 551 aa23.18■■□□□ 1.3
CDR2-207ENST00000569045 IP6K1Q92551 441 aa23.18■■□□□ 1.3
CDR2-207ENST00000569045 BCL9O00512 1426 aa23.17■■□□□ 1.3
CDR2-207ENST00000569045 RREB1Q92766 1687 aa23.17■■□□□ 1.3
CDR2-207ENST00000569045 PLSCR1O15162 318 aa23.17■■□□□ 1.3
CDR2-207ENST00000569045 TNS2Q63HR2 1409 aa23.16■■□□□ 1.3
CDR2-207ENST00000569045 AMPHP49418 695 aa23.16■■□□□ 1.3
CDR2-207ENST00000569045 SBF2Q86WG5 1849 aa23.16■■□□□ 1.3
CDR2-207ENST00000569045 LTV1Q96GA3 475 aaPredicted RBP23.14■■□□□ 1.29
CDR2-207ENST00000569045 NUP188Q5SRE5 1749 aa23.13■■□□□ 1.29
CDR2-207ENST00000569045 RGPD3A6NKT7 1758 aaPredicted RBP23.12■■□□□ 1.29
CDR2-207ENST00000569045 RGPD4Q7Z3J3 1758 aa23.12■■□□□ 1.29
CDR2-207ENST00000569045 MAP3K19Q56UN5 1328 aa23.11■■□□□ 1.29
CDR2-207ENST00000569045 FAM208AQ9UK61 1670 aaKnown RBP23.1■■□□□ 1.29
CDR2-207ENST00000569045 FYB1O15117 783 aa23.1■■□□□ 1.29
CDR2-207ENST00000569045 HOXC9P31274 260 aa23.1■■□□□ 1.29
CDR2-207ENST00000569045 CCER1Q8TC90 406 aaPredicted RBP23.1■■□□□ 1.29
CDR2-207ENST00000569045 GGNBP2Q9H3C7 697 aa23.09■■□□□ 1.29
CDR2-207ENST00000569045 PTF1AQ7RTS3 328 aa23.08■■□□□ 1.29
CDR2-207ENST00000569045 RTL1A6NKG5 1358 aa23.08■■□□□ 1.29
CDR2-207ENST00000569045 SMG6Q86US8 1419 aaKnown RBP23.06■■□□□ 1.28
CDR2-207ENST00000569045 FBLN1P23142 703 aa23.05■■□□□ 1.28
CDR2-207ENST00000569045 ACSBG1Q96GR2 724 aa23.05■■□□□ 1.28
CDR2-207ENST00000569045 RRS1Q15050 365 aaKnown RBP23.04■■□□□ 1.28
CDR2-207ENST00000569045 KCNQ2O43526 872 aa23.03■■□□□ 1.28
CDR2-207ENST00000569045 TXNRD1Q16881 649 aa23.03■■□□□ 1.28
CDR2-207ENST00000569045 DDX54Q8TDD1 881 aaKnown RBP23.03■■□□□ 1.28
CDR2-207ENST00000569045 KIF20BQ96Q89 1820 aa23.03■■□□□ 1.28
CDR2-207ENST00000569045 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
CDR2-207ENST00000569045 SPON1Q9HCB6 807 aa23.02■■□□□ 1.28
CDR2-207ENST00000569045 NHSQ6T4R5 1651 aa23.02■■□□□ 1.28
CDR2-207ENST00000569045 KAT6BQ8WYB5 2073 aa23.01■■□□□ 1.27
CDR2-207ENST00000569045 STK32BQ9NY57 414 aa23.01■■□□□ 1.27
CDR2-207ENST00000569045 PPP1R1BQ9UD71 204 aaPredicted RBP23.01■■□□□ 1.27
CDR2-207ENST00000569045 NSD3Q9BZ95 1437 aa23■■□□□ 1.27
CDR2-207ENST00000569045 EIF4G2P78344 907 aaKnown RBP eCLIP23■■□□□ 1.273e-7■■■■□ 24.5
CDR2-207ENST00000569045 PROM2Q8N271 834 aa23■■□□□ 1.27
CDR2-207ENST00000569045 KIF24Q5T7B8 1368 aa23■■□□□ 1.27
CDR2-207ENST00000569045 CARD14Q9BXL6 1004 aa22.99■■□□□ 1.27
CDR2-207ENST00000569045 MYOM1P52179 1685 aa22.98■■□□□ 1.27
CDR2-207ENST00000569045 ZCRB1Q8TBF4 217 aaKnown RBP22.98■■□□□ 1.27
CDR2-207ENST00000569045 RAPGEF4Q8WZA2 1011 aa22.98■■□□□ 1.27
CDR2-207ENST00000569045 ANO8Q9HCE9 1232 aaPredicted RBP22.98■■□□□ 1.27
CDR2-207ENST00000569045 CGNL1Q0VF96 1302 aa22.98■■□□□ 1.27
CDR2-207ENST00000569045 FLT4P35916 1363 aa22.98■■□□□ 1.27
CDR2-207ENST00000569045 INSRP06213 1382 aa22.96■■□□□ 1.27
CDR2-207ENST00000569045 NBPF6Q5VWK0 638 aa22.95■■□□□ 1.26
CDR2-207ENST00000569045 NBPF4Q96M43 638 aa22.95■■□□□ 1.26
CDR2-207ENST00000569045 TATP17735 454 aaPredicted RBP22.94■■□□□ 1.26
CDR2-207ENST00000569045 SLC15A2Q16348 729 aa22.94■■□□□ 1.26
CDR2-207ENST00000569045 HSP90AB2PQ58FF8 381 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms