RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
CDH3-208ENST00000569036 ITSN1Q15811 1721 aa17.04■□□□□ 0.32
CDH3-208ENST00000569036 COL13A1Q5TAT6 717 aaPredicted RBP17.03■□□□□ 0.32
CDH3-208ENST00000569036 POGKQ9P215 609 aa17.03■□□□□ 0.32
CDH3-208ENST00000569036 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
CDH3-208ENST00000569036 MARCH10Q8NA82 808 aaPredicted RBP17.02■□□□□ 0.32
CDH3-208ENST00000569036 C14orf93Q9H972 538 aaKnown RBP17.02■□□□□ 0.32
CDH3-208ENST00000569036 ADCY9O60503 1353 aa17.02■□□□□ 0.31
CDH3-208ENST00000569036 SLC34A2O95436 690 aa17.01■□□□□ 0.31
CDH3-208ENST00000569036 PRELPP51888 382 aa17.01■□□□□ 0.31
CDH3-208ENST00000569036 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
CDH3-208ENST00000569036 CFAP70Q5T0N1 1121 aa16.99■□□□□ 0.31
CDH3-208ENST00000569036 DNAJC5GQ8N7S2 189 aa16.99■□□□□ 0.31
CDH3-208ENST00000569036 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
CDH3-208ENST00000569036 MINK1Q8N4C8 1332 aaPredicted RBP16.98■□□□□ 0.31
CDH3-208ENST00000569036 NHSQ6T4R5 1651 aa16.98■□□□□ 0.31
CDH3-208ENST00000569036 APLP1P51693 650 aa16.98■□□□□ 0.31
CDH3-208ENST00000569036 ZNF827Q17R98 1081 aa16.98■□□□□ 0.31
CDH3-208ENST00000569036 USP19O94966 1318 aa16.97■□□□□ 0.31
CDH3-208ENST00000569036 POLD1P28340 1107 aa16.97■□□□□ 0.31
CDH3-208ENST00000569036 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
CDH3-208ENST00000569036 WASLO00401 505 aaPredicted RBP16.96■□□□□ 0.31
CDH3-208ENST00000569036 TNS4Q8IZW8 715 aa16.95■□□□□ 0.3
CDH3-208ENST00000569036 PCNTO95613 3336 aa16.95■□□□□ 0.3
CDH3-208ENST00000569036 SLC16A10Q8TF71 515 aa16.94■□□□□ 0.3
CDH3-208ENST00000569036 TUBGCP6Q96RT7 1819 aa16.93■□□□□ 0.3
CDH3-208ENST00000569036 KIF3CO14782 793 aa16.93■□□□□ 0.3
CDH3-208ENST00000569036 ADGRB1O14514 1584 aa16.93■□□□□ 0.3
CDH3-208ENST00000569036 BTAF1O14981 1849 aa16.91■□□□□ 0.3
CDH3-208ENST00000569036 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
CDH3-208ENST00000569036 WDR90Q96KV7 1748 aa16.91■□□□□ 0.3
CDH3-208ENST00000569036 GCP02774 474 aa16.91■□□□□ 0.3
CDH3-208ENST00000569036 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
CDH3-208ENST00000569036 ABTB2Q8N961 1025 aa16.91■□□□□ 0.3
CDH3-208ENST00000569036 CDCA7Q9BWT1 371 aaPredicted RBP16.9■□□□□ 0.3
CDH3-208ENST00000569036 COL18A1P39060 1754 aa16.89■□□□□ 0.3
CDH3-208ENST00000569036 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
CDH3-208ENST00000569036 TRAK1Q9UPV9 953 aa16.89■□□□□ 0.29
CDH3-208ENST00000569036 PNPLA7Q6ZV29 1317 aa16.89■□□□□ 0.29
CDH3-208ENST00000569036 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
CDH3-208ENST00000569036 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
CDH3-208ENST00000569036 ZBTB7CA1YPR0 619 aa16.87■□□□□ 0.29
CDH3-208ENST00000569036 ACEP12821 1306 aa16.87■□□□□ 0.29
CDH3-208ENST00000569036 BRD4O60885 1362 aaPredicted RBP16.87■□□□□ 0.29
CDH3-208ENST00000569036 ARHGEF28Q8N1W1 1705 aaKnown RBP16.87■□□□□ 0.29
CDH3-208ENST00000569036 WDR17Q8IZU2 1322 aa16.86■□□□□ 0.29
CDH3-208ENST00000569036 TNS2Q63HR2 1409 aa16.86■□□□□ 0.29
CDH3-208ENST00000569036 NLRP13Q86W25 1043 aa16.85■□□□□ 0.29
CDH3-208ENST00000569036 JMYQ8N9B5 988 aa16.85■□□□□ 0.29
CDH3-208ENST00000569036 ACSBG1Q96GR2 724 aa16.85■□□□□ 0.29
CDH3-208ENST00000569036 EXOC5O00471 708 aa16.83■□□□□ 0.28
CDH3-208ENST00000569036 SLIT3O75094 1523 aa16.83■□□□□ 0.28
CDH3-208ENST00000569036 USP6P35125 1406 aa16.83■□□□□ 0.28
CDH3-208ENST00000569036 KLRG1Q96E93 195 aa16.83■□□□□ 0.28
CDH3-208ENST00000569036 RGPD5Q99666 1765 aa16.83■□□□□ 0.28
CDH3-208ENST00000569036 ABCC6O95255 1503 aa16.82■□□□□ 0.28
CDH3-208ENST00000569036 TRPM1Q7Z4N2 1603 aa16.81■□□□□ 0.28
CDH3-208ENST00000569036 AXIN2Q9Y2T1 843 aa16.81■□□□□ 0.28
CDH3-208ENST00000569036 KAT6BQ8WYB5 2073 aa16.81■□□□□ 0.28
CDH3-208ENST00000569036 TOMM70O94826 608 aa16.8■□□□□ 0.28
CDH3-208ENST00000569036 PLEKHG3A1L390 1219 aa16.79■□□□□ 0.28
CDH3-208ENST00000569036 HTRA3P83110 453 aa16.79■□□□□ 0.28
CDH3-208ENST00000569036 CARD10Q9BWT7 1032 aa16.79■□□□□ 0.28
CDH3-208ENST00000569036 TFCP2L1Q9NZI6 479 aa16.79■□□□□ 0.28
CDH3-208ENST00000569036 CPSF1Q10570 1443 aaKnown RBP16.78■□□□□ 0.28
CDH3-208ENST00000569036 SLC27A3Q5K4L6 730 aa16.77■□□□□ 0.28
CDH3-208ENST00000569036 CDK19Q9BWU1 502 aa16.77■□□□□ 0.28
CDH3-208ENST00000569036 PCDH10Q9P2E7 1040 aa16.77■□□□□ 0.28
CDH3-208ENST00000569036 WWC3Q9ULE0 1092 aa16.77■□□□□ 0.28
CDH3-208ENST00000569036 CCDC61Q9Y6R9 512 aa16.77■□□□□ 0.28
CDH3-208ENST00000569036 CD2APQ9Y5K6 639 aa16.76■□□□□ 0.27
CDH3-208ENST00000569036 PPIP5K1Q6PFW1 1433 aa16.76■□□□□ 0.27
CDH3-208ENST00000569036 CCDC7Q96M83 1385 aa16.75■□□□□ 0.27
CDH3-208ENST00000569036 PIK3C2AO00443 1686 aa16.75■□□□□ 0.27
CDH3-208ENST00000569036 CSB-PGBD3P0DP91 1061 aa16.74■□□□□ 0.27
CDH3-208ENST00000569036 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
CDH3-208ENST00000569036 KCNQ4P56696 695 aa16.73■□□□□ 0.27
CDH3-208ENST00000569036 MSL1Q68DK7 614 aa16.73■□□□□ 0.27
CDH3-208ENST00000569036 NLRP6P59044 892 aa16.72■□□□□ 0.27
CDH3-208ENST00000569036 LY75O60449 1722 aa16.72■□□□□ 0.27
CDH3-208ENST00000569036 MSH5O43196 834 aa16.7■□□□□ 0.26
CDH3-208ENST00000569036 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
CDH3-208ENST00000569036 IGSF1Q8N6C5 1336 aa16.7■□□□□ 0.26
CDH3-208ENST00000569036 ARHGEF25Q86VW2 580 aa16.69■□□□□ 0.26
CDH3-208ENST00000569036 RBM46Q8TBY0 533 aaKnown RBP16.69■□□□□ 0.26
CDH3-208ENST00000569036 MPHOSPH9Q99550 1183 aa16.69■□□□□ 0.26
CDH3-208ENST00000569036 NMRK2Q9NPI5 230 aa16.69■□□□□ 0.26
CDH3-208ENST00000569036 HSPA1AP0DMV8 641 aaKnown RBP16.67■□□□□ 0.26
CDH3-208ENST00000569036 HSPA1BP0DMV9 641 aaKnown RBP16.67■□□□□ 0.26
CDH3-208ENST00000569036 QRICH2Q9H0J4 1663 aa16.65■□□□□ 0.26
CDH3-208ENST00000569036 FSTL1Q12841 308 aa16.64■□□□□ 0.25
CDH3-208ENST00000569036 PPARGC1BQ86YN6 1023 aaKnown RBP16.64■□□□□ 0.25
CDH3-208ENST00000569036 NFAT5O94916 1531 aa16.64■□□□□ 0.25
CDH3-208ENST00000569036 DOT1LQ8TEK3 1739 aa16.63■□□□□ 0.25
CDH3-208ENST00000569036 IL2RBP14784 551 aa16.62■□□□□ 0.25
CDH3-208ENST00000569036 SOX12O15370 315 aa16.61■□□□□ 0.25
CDH3-208ENST00000569036 USP54Q70EL1 1684 aa16.61■□□□□ 0.25
CDH3-208ENST00000569036 NSD2O96028 1365 aa16.61■□□□□ 0.25
CDH3-208ENST00000569036 C5P01031 1676 aa16.6■□□□□ 0.25
CDH3-208ENST00000569036 C16orf71Q8IYS4 520 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms