RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 TMC1Q8TDI8 760 aa25.6■■□□□ 1.69
SYNGR3-205ENST00000568896 ZNF692Q9BU19 519 aaPredicted RBP25.6■■□□□ 1.69
SYNGR3-205ENST00000568896 SLIT3O75094 1523 aa25.59■■□□□ 1.69
SYNGR3-205ENST00000568896 HSPA5P11021 654 aaKnown RBP25.59■■□□□ 1.69
SYNGR3-205ENST00000568896 TOM1L2Q6ZVM7 507 aa25.59■■□□□ 1.69
SYNGR3-205ENST00000568896 SLC12A5Q9H2X9 1139 aa25.59■■□□□ 1.69
SYNGR3-205ENST00000568896 NBPF14Q5TI25 921 aa25.58■■□□□ 1.69
SYNGR3-205ENST00000568896 KTN1Q86UP2 1357 aaKnown RBP25.57■■□□□ 1.68
SYNGR3-205ENST00000568896 NINLQ9Y2I6 1382 aa25.57■■□□□ 1.68
SYNGR3-205ENST00000568896 MON2Q7Z3U7 1717 aa25.57■■□□□ 1.68
SYNGR3-205ENST00000568896 SOX12O15370 315 aa25.57■■□□□ 1.68
SYNGR3-205ENST00000568896 TTC21BQ7Z4L5 1316 aa25.57■■□□□ 1.68
SYNGR3-205ENST00000568896 DDB1Q16531 1140 aa25.56■■□□□ 1.68
SYNGR3-205ENST00000568896 PTF1AQ7RTS3 328 aa25.56■■□□□ 1.68
SYNGR3-205ENST00000568896 CDCA8Q53HL2 280 aa25.55■■□□□ 1.68
SYNGR3-205ENST00000568896 PARP4Q9UKK3 1724 aaKnown RBP25.54■■□□□ 1.68
SYNGR3-205ENST00000568896 ARHGEF25Q86VW2 580 aa25.54■■□□□ 1.68
SYNGR3-205ENST00000568896 PIK3C2AO00443 1686 aa25.54■■□□□ 1.68
SYNGR3-205ENST00000568896 RREB1Q92766 1687 aa25.54■■□□□ 1.68
SYNGR3-205ENST00000568896 A0A1W2PP64 1363 aa25.54■■□□□ 1.68
SYNGR3-205ENST00000568896 HDGFL2Q7Z4V5 671 aaPredicted RBP25.53■■□□□ 1.68
SYNGR3-205ENST00000568896 TERF2IPQ9NYB0 399 aa25.53■■□□□ 1.68
SYNGR3-205ENST00000568896 WDR17Q8IZU2 1322 aa25.53■■□□□ 1.68
SYNGR3-205ENST00000568896 NUP188Q5SRE5 1749 aa25.52■■□□□ 1.68
SYNGR3-205ENST00000568896 OVOS2A0A0G2JMS6 1433 aa25.52■■□□□ 1.68
SYNGR3-205ENST00000568896 OVOS2A0A0J9YW53 1432 aa25.52■■□□□ 1.68
SYNGR3-205ENST00000568896 OVOS2Q6IE36 1432 aa25.52■■□□□ 1.68
SYNGR3-205ENST00000568896 COL18A1P39060 1754 aa25.51■■□□□ 1.67
SYNGR3-205ENST00000568896 C11orf95C9JLR9 678 aaPredicted RBP25.51■■□□□ 1.67
SYNGR3-205ENST00000568896 MARCH10Q8NA82 808 aaPredicted RBP25.51■■□□□ 1.67
SYNGR3-205ENST00000568896 TTC21AQ8NDW8 1320 aa25.51■■□□□ 1.67
SYNGR3-205ENST00000568896 EDC4Q6P2E9 1401 aaKnown RBP25.5■■□□□ 1.67
SYNGR3-205ENST00000568896 KCNH5Q8NCM2 988 aa25.5■■□□□ 1.67
SYNGR3-205ENST00000568896 PEAK1Q9H792 1746 aa25.49■■□□□ 1.67
SYNGR3-205ENST00000568896 ANKRD36BQ8N2N9 1353 aa25.48■■□□□ 1.67
SYNGR3-205ENST00000568896 CSB-PGBD3P0DP91 1061 aa25.48■■□□□ 1.67
SYNGR3-205ENST00000568896 MYOM1P52179 1685 aa25.48■■□□□ 1.67
SYNGR3-205ENST00000568896 PLSCR1O15162 318 aa25.47■■□□□ 1.67
SYNGR3-205ENST00000568896 BCL11BQ9C0K0 894 aaPredicted RBP25.47■■□□□ 1.67
SYNGR3-205ENST00000568896 LRRC37A3O60309 1634 aa25.47■■□□□ 1.67
SYNGR3-205ENST00000568896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.46■■□□□ 1.67
SYNGR3-205ENST00000568896 CARD10Q9BWT7 1032 aa25.46■■□□□ 1.67
SYNGR3-205ENST00000568896 PROM2Q8N271 834 aa25.45■■□□□ 1.66
SYNGR3-205ENST00000568896 ANO8Q9HCE9 1232 aaPredicted RBP25.45■■□□□ 1.66
SYNGR3-205ENST00000568896 KCNQ2O43526 872 aa25.44■■□□□ 1.66
SYNGR3-205ENST00000568896 CDCA7Q9BWT1 371 aaPredicted RBP25.44■■□□□ 1.66
SYNGR3-205ENST00000568896 SPON1Q9HCB6 807 aa25.44■■□□□ 1.66
SYNGR3-205ENST00000568896 NME9Q86XW9 330 aa25.42■■□□□ 1.66
SYNGR3-205ENST00000568896 PDGFDQ9GZP0 370 aaPredicted RBP25.41■■□□□ 1.66
SYNGR3-205ENST00000568896 PPP1R1BQ9UD71 204 aaPredicted RBP25.41■■□□□ 1.66
SYNGR3-205ENST00000568896 USP54Q70EL1 1684 aa25.41■■□□□ 1.66
SYNGR3-205ENST00000568896 USP31Q70CQ4 1352 aa25.41■■□□□ 1.66
SYNGR3-205ENST00000568896 EXOC5O00471 708 aa25.4■■□□□ 1.66
SYNGR3-205ENST00000568896 POLR3GLQ9BT43 218 aa25.4■■□□□ 1.66
SYNGR3-205ENST00000568896 NFAT5O94916 1531 aa25.4■■□□□ 1.66
SYNGR3-205ENST00000568896 SBF2Q86WG5 1849 aa25.39■■□□□ 1.65
SYNGR3-205ENST00000568896 RGPD5Q99666 1765 aa25.39■■□□□ 1.65
SYNGR3-205ENST00000568896 BCL9O00512 1426 aa25.37■■□□□ 1.65
SYNGR3-205ENST00000568896 TXNRD1Q16881 649 aa25.35■■□□□ 1.65
SYNGR3-205ENST00000568896 WNK3Q9BYP7 1800 aa25.35■■□□□ 1.65
SYNGR3-205ENST00000568896 CCDC7Q96M83 1385 aa25.34■■□□□ 1.65
SYNGR3-205ENST00000568896 ZBTB7AO95365 584 aa25.33■■□□□ 1.65
SYNGR3-205ENST00000568896 NLRP2Q9NX02 1062 aa25.33■■□□□ 1.65
SYNGR3-205ENST00000568896 CARD14Q9BXL6 1004 aa25.32■■□□□ 1.64
SYNGR3-205ENST00000568896 RGPD3A6NKT7 1758 aaPredicted RBP25.31■■□□□ 1.64
SYNGR3-205ENST00000568896 RGPD4Q7Z3J3 1758 aa25.31■■□□□ 1.64
SYNGR3-205ENST00000568896 NSD3Q9BZ95 1437 aa25.31■■□□□ 1.64
SYNGR3-205ENST00000568896 YY1P25490 414 aa25.31■■□□□ 1.64
SYNGR3-205ENST00000568896 ACSBG1Q96GR2 724 aa25.31■■□□□ 1.64
SYNGR3-205ENST00000568896 ERBB3P21860 1342 aa25.31■■□□□ 1.64
SYNGR3-205ENST00000568896 KIF7Q2M1P5 1343 aa25.31■■□□□ 1.64
SYNGR3-205ENST00000568896 STK32BQ9NY57 414 aa25.29■■□□□ 1.64
SYNGR3-205ENST00000568896 ATF5Q9Y2D1 282 aaPredicted RBP25.29■■□□□ 1.64
SYNGR3-205ENST00000568896 TNS2Q63HR2 1409 aa25.29■■□□□ 1.64
SYNGR3-205ENST00000568896 FYB1O15117 783 aa25.28■■□□□ 1.64
SYNGR3-205ENST00000568896 SLC15A2Q16348 729 aa25.28■■□□□ 1.64
SYNGR3-205ENST00000568896 ANKRD24Q8TF21 1146 aa25.28■■□□□ 1.64
SYNGR3-205ENST00000568896 COG3Q96JB2 828 aa25.27■■□□□ 1.64
SYNGR3-205ENST00000568896 ABCC6O95255 1503 aa25.27■■□□□ 1.64
SYNGR3-205ENST00000568896 CASZ1Q86V15 1759 aa25.26■■□□□ 1.63
SYNGR3-205ENST00000568896 KIF20BQ96Q89 1820 aa25.26■■□□□ 1.63
SYNGR3-205ENST00000568896 IL2RBP14784 551 aa25.26■■□□□ 1.63
SYNGR3-205ENST00000568896 PTGER2P43116 358 aa25.26■■□□□ 1.63
SYNGR3-205ENST00000568896 GGNBP2Q9H3C7 697 aa25.25■■□□□ 1.63
SYNGR3-205ENST00000568896 DCAF8L1A6NGE4 600 aa25.23■■□□□ 1.63
SYNGR3-205ENST00000568896 PANK3Q9H999 370 aa25.23■■□□□ 1.63
SYNGR3-205ENST00000568896 LTV1Q96GA3 475 aaPredicted RBP25.21■■□□□ 1.63
SYNGR3-205ENST00000568896 CGNL1Q0VF96 1302 aa25.2■■□□□ 1.62
SYNGR3-205ENST00000568896 LTN1O94822 1766 aa25.2■■□□□ 1.62
SYNGR3-205ENST00000568896 WASHC2AQ641Q2 1341 aa25.19■■□□□ 1.62
SYNGR3-205ENST00000568896 IP6K1Q92551 441 aa25.19■■□□□ 1.62
SYNGR3-205ENST00000568896 FBLN1P23142 703 aa25.18■■□□□ 1.62
SYNGR3-205ENST00000568896 DDX54Q8TDD1 881 aaKnown RBP25.17■■□□□ 1.62
SYNGR3-205ENST00000568896 NHSQ6T4R5 1651 aa25.17■■□□□ 1.62
SYNGR3-205ENST00000568896 MTFR1LQ9H019 292 aa25.16■■□□□ 1.62
SYNGR3-205ENST00000568896 ZNF827Q17R98 1081 aa25.15■■□□□ 1.62
SYNGR3-205ENST00000568896 SGIP1Q9BQI5 828 aa25.15■■□□□ 1.62
SYNGR3-205ENST00000568896 FHDC1Q9C0D6 1143 aaPredicted RBP25.15■■□□□ 1.62
SYNGR3-205ENST00000568896 LRRC4BQ9NT99 713 aa25.15■■□□□ 1.62
SYNGR3-205ENST00000568896 MAP3K19Q56UN5 1328 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms