RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 RTL1A6NKG5 1358 aa22.71■■□□□ 1.23
COMMD4-224ENST00000568877 KIF24Q5T7B8 1368 aa22.71■■□□□ 1.23
COMMD4-224ENST00000568877 ABCC6O95255 1503 aa22.71■■□□□ 1.23
COMMD4-224ENST00000568877 PLCH1Q4KWH8 1693 aa22.71■■□□□ 1.23
COMMD4-224ENST00000568877 COL18A1P39060 1754 aa22.71■■□□□ 1.23
COMMD4-224ENST00000568877 PPM1GO15355 546 aaPredicted RBP22.7■■□□□ 1.22
COMMD4-224ENST00000568877 PARD3Q8TEW0 1356 aa22.7■■□□□ 1.22
COMMD4-224ENST00000568877 NWD2Q9ULI1 1742 aa22.69■■□□□ 1.22
COMMD4-224ENST00000568877 EVA1CP58658 441 aa22.69■■□□□ 1.22
COMMD4-224ENST00000568877 RALBP1Q15311 655 aa22.69■■□□□ 1.22
COMMD4-224ENST00000568877 ZNF772Q68DY9 489 aaPredicted RBP22.69■■□□□ 1.22
COMMD4-224ENST00000568877 RGS17Q9UGC6 210 aaPredicted RBP22.69■■□□□ 1.22
COMMD4-224ENST00000568877 FLT4P35916 1363 aa22.68■■□□□ 1.22
COMMD4-224ENST00000568877 BLMP54132 1417 aaPredicted RBP22.67■■□□□ 1.22
COMMD4-224ENST00000568877 STRN4Q9NRL3 753 aa22.67■■□□□ 1.22
COMMD4-224ENST00000568877 COL5A2P05997 1499 aaPredicted RBP22.66■■□□□ 1.22
COMMD4-224ENST00000568877 SMG6Q86US8 1419 aaKnown RBP22.66■■□□□ 1.22
COMMD4-224ENST00000568877 PPP2R1AP30153 589 aa22.66■■□□□ 1.22
COMMD4-224ENST00000568877 MTHFSP49914 203 aa22.66■■□□□ 1.22
COMMD4-224ENST00000568877 HSP90AB2PQ58FF8 381 aa22.66■■□□□ 1.22
COMMD4-224ENST00000568877 MAP2P11137 1827 aaKnown RBP22.66■■□□□ 1.22
COMMD4-224ENST00000568877 PEAK1Q9H792 1746 aa22.65■■□□□ 1.22
COMMD4-224ENST00000568877 TRPC5Q9UL62 973 aaPredicted RBP22.65■■□□□ 1.22
COMMD4-224ENST00000568877 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
COMMD4-224ENST00000568877 INSRP06213 1382 aa22.64■■□□□ 1.22
COMMD4-224ENST00000568877 ANKRD24Q8TF21 1146 aa22.64■■□□□ 1.21
COMMD4-224ENST00000568877 PRKRIP1Q9H875 184 aaPredicted RBP22.64■■□□□ 1.21
COMMD4-224ENST00000568877 QTRT2Q9H974 415 aaKnown RBP22.64■■□□□ 1.21
COMMD4-224ENST00000568877 ERBB3P21860 1342 aa22.63■■□□□ 1.21
COMMD4-224ENST00000568877 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.63■■□□□ 1.21
COMMD4-224ENST00000568877 VPS72Q15906 364 aa22.63■■□□□ 1.21
COMMD4-224ENST00000568877 LARP1Q6PKG0 1096 aaKnown RBP22.63■■□□□ 1.21
COMMD4-224ENST00000568877 WDR17Q8IZU2 1322 aa22.62■■□□□ 1.21
COMMD4-224ENST00000568877 CSB-PGBD3P0DP91 1061 aa22.62■■□□□ 1.21
COMMD4-224ENST00000568877 LTV1Q96GA3 475 aaPredicted RBP22.62■■□□□ 1.21
COMMD4-224ENST00000568877 ATRNO75882 1429 aa22.62■■□□□ 1.21
COMMD4-224ENST00000568877 CDK12Q9NYV4 1490 aaPredicted RBP22.61■■□□□ 1.21
COMMD4-224ENST00000568877 RGPD5Q99666 1765 aa22.61■■□□□ 1.21
COMMD4-224ENST00000568877 ANP32CO43423 234 aa22.6■■□□□ 1.21
COMMD4-224ENST00000568877 CCDC9Q9Y3X0 531 aaKnown RBP22.6■■□□□ 1.21
COMMD4-224ENST00000568877 POTEAQ6S8J7 498 aa22.59■■□□□ 1.21
COMMD4-224ENST00000568877 TOM1L2Q6ZVM7 507 aa22.59■■□□□ 1.21
COMMD4-224ENST00000568877 SPATA31A5Q5VU36 1347 aa22.58■■□□□ 1.21
COMMD4-224ENST00000568877 SPATA31A7Q8IWB4 1347 aa22.58■■□□□ 1.21
COMMD4-224ENST00000568877 MYBBP1AQ9BQG0 1328 aaKnown RBP22.58■■□□□ 1.21
COMMD4-224ENST00000568877 CRB1P82279 1406 aa22.58■■□□□ 1.21
COMMD4-224ENST00000568877 GJD4Q96KN9 370 aaPredicted RBP22.58■■□□□ 1.21
COMMD4-224ENST00000568877 EIF4A2Q14240 407 aaKnown RBP22.57■■□□□ 1.2
COMMD4-224ENST00000568877 SPATA31A1Q5TZJ5 1347 aa22.57■■□□□ 1.2
COMMD4-224ENST00000568877 CARD10Q9BWT7 1032 aa22.56■■□□□ 1.2
COMMD4-224ENST00000568877 NLRP2Q9NX02 1062 aa22.56■■□□□ 1.2
COMMD4-224ENST00000568877 RBM6P78332 1123 aaKnown RBP22.55■■□□□ 1.2
COMMD4-224ENST00000568877 CFAP53Q96M91 514 aa22.55■■□□□ 1.2
COMMD4-224ENST00000568877 USP35Q9P2H5 1018 aa22.55■■□□□ 1.2
COMMD4-224ENST00000568877 RXRBP28702 533 aa22.54■■□□□ 1.2
COMMD4-224ENST00000568877 IL13P35225 146 aa22.53■■□□□ 1.2
COMMD4-224ENST00000568877 NBPF6Q5VWK0 638 aa22.53■■□□□ 1.2
COMMD4-224ENST00000568877 TCP11L2Q8N4U5 519 aa22.53■■□□□ 1.2
COMMD4-224ENST00000568877 NBPF4Q96M43 638 aa22.53■■□□□ 1.2
COMMD4-224ENST00000568877 DIAPH1O60610 1272 aaKnown RBP22.52■■□□□ 1.2
COMMD4-224ENST00000568877 DIEXFQ68CQ4 756 aaKnown RBP22.52■■□□□ 1.2
COMMD4-224ENST00000568877 THRAP3Q9Y2W1 955 aaKnown RBP22.52■■□□□ 1.2
COMMD4-224ENST00000568877 GLI3P10071 1580 aa22.51■■□□□ 1.19
COMMD4-224ENST00000568877 COL3A1P02461 1466 aaPredicted RBP22.51■■□□□ 1.19
COMMD4-224ENST00000568877 FAM208AQ9UK61 1670 aaKnown RBP22.51■■□□□ 1.19
COMMD4-224ENST00000568877 EYA1Q99502 592 aa22.5■■□□□ 1.19
COMMD4-224ENST00000568877 FAM98CQ17RN3 349 aaKnown RBP22.49■■□□□ 1.19
COMMD4-224ENST00000568877 BARGINQ6ZT62 677 aa22.49■■□□□ 1.19
COMMD4-224ENST00000568877 ONECUT3O60422 494 aaPredicted RBP22.48■■□□□ 1.19
COMMD4-224ENST00000568877 USHBP1Q8N6Y0 703 aa22.48■■□□□ 1.19
COMMD4-224ENST00000568877 IGSF1Q8N6C5 1336 aa22.47■■□□□ 1.19
COMMD4-224ENST00000568877 RGPD2P0DJD1 1756 aa22.45■■□□□ 1.19
COMMD4-224ENST00000568877 NUDCQ9Y266 331 aa22.45■■□□□ 1.18
COMMD4-224ENST00000568877 NCAPD2Q15021 1401 aa22.44■■□□□ 1.18
COMMD4-224ENST00000568877 CDCA7Q9BWT1 371 aaPredicted RBP22.44■■□□□ 1.18
COMMD4-224ENST00000568877 U2SURPO15042 1029 aaKnown RBP22.43■■□□□ 1.18
COMMD4-224ENST00000568877 IL2RBP14784 551 aa22.43■■□□□ 1.18
COMMD4-224ENST00000568877 DISP2A7MBM2 1401 aa22.42■■□□□ 1.18
COMMD4-224ENST00000568877 A0A0G2JS52 829 aa22.42■■□□□ 1.18
COMMD4-224ENST00000568877 MYT1Q01538 1121 aa22.42■■□□□ 1.18
COMMD4-224ENST00000568877 SULT6B1Q6IMI4 303 aa22.42■■□□□ 1.18
COMMD4-224ENST00000568877 SEPT12Q8IYM1 358 aa22.42■■□□□ 1.18
COMMD4-224ENST00000568877 RGPD1P0DJD0 1748 aa22.42■■□□□ 1.18
COMMD4-224ENST00000568877 RAPGEF4Q8WZA2 1011 aa22.41■■□□□ 1.18
COMMD4-224ENST00000568877 AEBP1Q8IUX7 1158 aa22.4■■□□□ 1.18
COMMD4-224ENST00000568877 KDRP35968 1356 aa22.39■■□□□ 1.18
COMMD4-224ENST00000568877 CCDC184Q52MB2 194 aa22.39■■□□□ 1.17
COMMD4-224ENST00000568877 THSD7AQ9UPZ6 1657 aa22.39■■□□□ 1.17
COMMD4-224ENST00000568877 RGS12O14924 1447 aa22.39■■□□□ 1.17
COMMD4-224ENST00000568877 HMOX1P09601 288 aa22.38■■□□□ 1.17
COMMD4-224ENST00000568877 U2AF1L5P0DN76 240 aaPredicted RBP22.38■■□□□ 1.17
COMMD4-224ENST00000568877 TATP17735 454 aaPredicted RBP22.38■■□□□ 1.17
COMMD4-224ENST00000568877 U2AF1Q01081 240 aaKnown RBP eCLIP22.38■■□□□ 1.17
COMMD4-224ENST00000568877 MEGF6O75095 1541 aa22.37■■□□□ 1.17
COMMD4-224ENST00000568877 WNK3Q9BYP7 1800 aa22.36■■□□□ 1.17
COMMD4-224ENST00000568877 EXOC5O00471 708 aa22.36■■□□□ 1.17
COMMD4-224ENST00000568877 DDB1Q16531 1140 aa22.36■■□□□ 1.17
COMMD4-224ENST00000568877 OVOS2A0A0G2JMS6 1433 aa22.35■■□□□ 1.17
COMMD4-224ENST00000568877 MRS2Q9HD23 443 aa22.35■■□□□ 1.17
COMMD4-224ENST00000568877 PARP4Q9UKK3 1724 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms