RNA–Protein interactions for RNA: ENST00000568870.1

TCF25-223, Transcript of transcription factor 25, human

TSL 2

Gene TCF25, Length 263 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF25-223	ENST00000568870	RTL1	A6NKG5	1358 aa		18.8	■□□□□ 0.6
TCF25-223	ENST00000568870	PPP2R1A	P30153	589 aa		18.79	■□□□□ 0.6
TCF25-223	ENST00000568870	HOXC9	P31274	260 aa		18.79	■□□□□ 0.6
TCF25-223	ENST00000568870	BTG4	Q9NY30	223 aa		18.79	■□□□□ 0.6
TCF25-223	ENST00000568870	FLT4	P35916	1363 aa		18.79	■□□□□ 0.6
TCF25-223	ENST00000568870	ABCC6	O95255	1503 aa		18.79	■□□□□ 0.6
TCF25-223	ENST00000568870	IP6K1	Q92551	441 aa		18.78	■□□□□ 0.6
TCF25-223	ENST00000568870	CAMTA1	Q9Y6Y1	1673 aa		18.78	■□□□□ 0.6
TCF25-223	ENST00000568870	AFF2	P51816	1311 aa		18.77	■□□□□ 0.6
TCF25-223	ENST00000568870	SMG6	Q86US8	1419 aa	Known RBP	18.77	■□□□□ 0.6
TCF25-223	ENST00000568870	MTHFS	P49914	203 aa		18.77	■□□□□ 0.6
TCF25-223	ENST00000568870	STRN4	Q9NRL3	753 aa		18.77	■□□□□ 0.6
TCF25-223	ENST00000568870	AXIN2	Q9Y2T1	843 aa		18.77	■□□□□ 0.6
TCF25-223	ENST00000568870	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.76	■□□□□ 0.59
TCF25-223	ENST00000568870	BLM	P54132	1417 aa	Predicted RBP	18.76	■□□□□ 0.59
TCF25-223	ENST00000568870	SLIT2	O94813	1529 aa		18.76	■□□□□ 0.59
TCF25-223	ENST00000568870	EVA1C	P58658	441 aa		18.76	■□□□□ 0.59
TCF25-223	ENST00000568870	LTV1	Q96GA3	475 aa	Predicted RBP	18.76	■□□□□ 0.59
TCF25-223	ENST00000568870	NRAP	Q86VF7	1730 aa		18.76	■□□□□ 0.59
TCF25-223	ENST00000568870	KIF24	Q5T7B8	1368 aa		18.76	■□□□□ 0.59
TCF25-223	ENST00000568870	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.76	■□□□□ 0.59
TCF25-223	ENST00000568870	HSP90AB2P	Q58FF8	381 aa		18.75	■□□□□ 0.59
TCF25-223	ENST00000568870	PHF23	Q9BUL5	403 aa	Predicted RBP	18.75	■□□□□ 0.59
TCF25-223	ENST00000568870	USP21	Q9UK80	565 aa		18.75	■□□□□ 0.59
TCF25-223	ENST00000568870	COL5A2	P05997	1499 aa	Predicted RBP	18.74	■□□□□ 0.59
TCF25-223	ENST00000568870	CSB-PGBD3	P0DP91	1061 aa		18.74	■□□□□ 0.59
TCF25-223	ENST00000568870	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.74	■□□□□ 0.59
TCF25-223	ENST00000568870	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.74	■□□□□ 0.59
TCF25-223	ENST00000568870	INSR	P06213	1382 aa		18.73	■□□□□ 0.59
TCF25-223	ENST00000568870	ANKRD24	Q8TF21	1146 aa		18.73	■□□□□ 0.59
TCF25-223	ENST00000568870	UNC5CL	Q8IV45	518 aa		18.72	■□□□□ 0.59
TCF25-223	ENST00000568870	CFAP53	Q96M91	514 aa		18.72	■□□□□ 0.59
TCF25-223	ENST00000568870	BCL9L	Q86UU0	1499 aa		18.71	■□□□□ 0.59
TCF25-223	ENST00000568870	CCDC9	Q9Y3X0	531 aa	Known RBP	18.71	■□□□□ 0.59
TCF25-223	ENST00000568870	ERBB3	P21860	1342 aa		18.71	■□□□□ 0.59
TCF25-223	ENST00000568870	RGPD2	P0DJD1	1756 aa		18.7	■□□□□ 0.58
TCF25-223	ENST00000568870	FAM208A	Q9UK61	1670 aa	Known RBP	18.7	■□□□□ 0.58
TCF25-223	ENST00000568870	ZNF772	Q68DY9	489 aa	Predicted RBP	18.69	■□□□□ 0.58
TCF25-223	ENST00000568870	LARP1	Q6PKG0	1096 aa	Known RBP	18.69	■□□□□ 0.58
TCF25-223	ENST00000568870	TOM1L2	Q6ZVM7	507 aa		18.69	■□□□□ 0.58
TCF25-223	ENST00000568870	WDR17	Q8IZU2	1322 aa		18.69	■□□□□ 0.58
TCF25-223	ENST00000568870	EIF4A2	Q14240	407 aa	Known RBP	18.68	■□□□□ 0.58
TCF25-223	ENST00000568870	NLRP2	Q9NX02	1062 aa		18.68	■□□□□ 0.58
TCF25-223	ENST00000568870	COL3A1	P02461	1466 aa	Predicted RBP	18.67	■□□□□ 0.58
TCF25-223	ENST00000568870	USP35	Q9P2H5	1018 aa		18.67	■□□□□ 0.58
TCF25-223	ENST00000568870	TRPC5	Q9UL62	973 aa	Predicted RBP	18.67	■□□□□ 0.58
TCF25-223	ENST00000568870	CRB1	P82279	1406 aa		18.66	■□□□□ 0.58
TCF25-223	ENST00000568870	DIAPH1	O60610	1272 aa	Known RBP	18.66	■□□□□ 0.58
TCF25-223	ENST00000568870	VPS72	Q15906	364 aa		18.65	■□□□□ 0.58
TCF25-223	ENST00000568870	QTRT2	Q9H974	415 aa	Known RBP	18.65	■□□□□ 0.58
TCF25-223	ENST00000568870	ATRN	O75882	1429 aa		18.65	■□□□□ 0.58
TCF25-223	ENST00000568870	IL13	P35225	146 aa		18.64	■□□□□ 0.57
TCF25-223	ENST00000568870	U2SURP	O15042	1029 aa	Known RBP	18.63	■□□□□ 0.57
TCF25-223	ENST00000568870	NBPF6	Q5VWK0	638 aa		18.63	■□□□□ 0.57
TCF25-223	ENST00000568870	USHBP1	Q8N6Y0	703 aa		18.63	■□□□□ 0.57
TCF25-223	ENST00000568870	NBPF4	Q96M43	638 aa		18.63	■□□□□ 0.57
TCF25-223	ENST00000568870	RGS17	Q9UGC6	210 aa	Predicted RBP	18.63	■□□□□ 0.57
TCF25-223	ENST00000568870	SPATA31A5	Q5VU36	1347 aa		18.63	■□□□□ 0.57
TCF25-223	ENST00000568870	SPATA31A7	Q8IWB4	1347 aa		18.63	■□□□□ 0.57
TCF25-223	ENST00000568870	MIER1	Q8N108	512 aa		18.62	■□□□□ 0.57
TCF25-223	ENST00000568870	EYA1	Q99502	592 aa		18.62	■□□□□ 0.57
TCF25-223	ENST00000568870	CARD10	Q9BWT7	1032 aa		18.62	■□□□□ 0.57
TCF25-223	ENST00000568870	NUDC	Q9Y266	331 aa		18.62	■□□□□ 0.57
TCF25-223	ENST00000568870	SPATA31A1	Q5TZJ5	1347 aa		18.62	■□□□□ 0.57
TCF25-223	ENST00000568870	RGPD1	P0DJD0	1748 aa		18.61	■□□□□ 0.57
TCF25-223	ENST00000568870	GJD4	Q96KN9	370 aa	Predicted RBP	18.61	■□□□□ 0.57
TCF25-223	ENST00000568870	MRS2	Q9HD23	443 aa		18.61	■□□□□ 0.57
TCF25-223	ENST00000568870	WNK3	Q9BYP7	1800 aa		18.6	■□□□□ 0.57
TCF25-223	ENST00000568870	GLI3	P10071	1580 aa		18.6	■□□□□ 0.57
TCF25-223	ENST00000568870	CCDC184	Q52MB2	194 aa		18.6	■□□□□ 0.57
TCF25-223	ENST00000568870	TCP11L2	Q8N4U5	519 aa		18.6	■□□□□ 0.57
TCF25-223	ENST00000568870	IGSF1	Q8N6C5	1336 aa		18.59	■□□□□ 0.57
TCF25-223	ENST00000568870		A0A0G2JS52	829 aa		18.58	■□□□□ 0.56
TCF25-223	ENST00000568870	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.58	■□□□□ 0.56
TCF25-223	ENST00000568870	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.58	■□□□□ 0.56	5e-21	■■■■■ 37.1
TCF25-223	ENST00000568870	MYT1	Q01538	1121 aa		18.58	■□□□□ 0.56
TCF25-223	ENST00000568870	POTEA	Q6S8J7	498 aa		18.58	■□□□□ 0.56
TCF25-223	ENST00000568870	HMOX1	P09601	288 aa		18.57	■□□□□ 0.56
TCF25-223	ENST00000568870	RBM6	P78332	1123 aa	Known RBP	18.57	■□□□□ 0.56
TCF25-223	ENST00000568870	WDR43	Q15061	677 aa	Known RBP eCLIP	18.57	■□□□□ 0.56
TCF25-223	ENST00000568870	FAM98C	Q17RN3	349 aa	Known RBP	18.57	■□□□□ 0.56
TCF25-223	ENST00000568870	SULT6B1	Q6IMI4	303 aa		18.57	■□□□□ 0.56
TCF25-223	ENST00000568870	THRAP3	Q9Y2W1	955 aa	Known RBP	18.57	■□□□□ 0.56
TCF25-223	ENST00000568870	RXRB	P28702	533 aa		18.56	■□□□□ 0.56
TCF25-223	ENST00000568870	AEBP1	Q8IUX7	1158 aa		18.56	■□□□□ 0.56
TCF25-223	ENST00000568870	PARP4	Q9UKK3	1724 aa	Known RBP	18.55	■□□□□ 0.56
TCF25-223	ENST00000568870	RAPGEF4	Q8WZA2	1011 aa		18.55	■□□□□ 0.56
TCF25-223	ENST00000568870	NCAPD2	Q15021	1401 aa		18.55	■□□□□ 0.56
TCF25-223	ENST00000568870	CCER2	I3L3R5	266 aa		18.54	■□□□□ 0.56
TCF25-223	ENST00000568870	IL2RB	P14784	551 aa		18.54	■□□□□ 0.56
TCF25-223	ENST00000568870	BARGIN	Q6ZT62	677 aa		18.54	■□□□□ 0.56
TCF25-223	ENST00000568870	TAT	P17735	454 aa	Predicted RBP	18.53	■□□□□ 0.56
TCF25-223	ENST00000568870	MEGF6	O75095	1541 aa		18.53	■□□□□ 0.56
TCF25-223	ENST00000568870	THSD7A	Q9UPZ6	1657 aa		18.51	■□□□□ 0.55
TCF25-223	ENST00000568870	DISP2	A7MBM2	1401 aa		18.51	■□□□□ 0.55
TCF25-223	ENST00000568870	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.51	■□□□□ 0.55
TCF25-223	ENST00000568870	LRRC37A3	O60309	1634 aa		18.51	■□□□□ 0.55
TCF25-223	ENST00000568870	KDR	P35968	1356 aa		18.51	■□□□□ 0.55
TCF25-223	ENST00000568870	PRKAR2B	P31323	418 aa		18.49	■□□□□ 0.55
TCF25-223	ENST00000568870	SEPT12	Q8IYM1	358 aa		18.49	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms