RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 HOXC9P31274 260 aa13.76□□□□□ -0.21
PKM-221ENST00000568743 ZNF772Q68DY9 489 aaPredicted RBP13.76□□□□□ -0.21
PKM-221ENST00000568743 POTEAQ6S8J7 498 aa13.76□□□□□ -0.21
PKM-221ENST00000568743 LTV1Q96GA3 475 aaPredicted RBP13.76□□□□□ -0.21
PKM-221ENST00000568743 QTRT2Q9H974 415 aaKnown RBP13.76□□□□□ -0.21
PKM-221ENST00000568743 POLKQ9UBT6 870 aa13.76□□□□□ -0.21
PKM-221ENST00000568743 LTN1O94822 1766 aa13.76□□□□□ -0.21
PKM-221ENST00000568743 EVA1CP58658 441 aa13.75□□□□□ -0.21
PKM-221ENST00000568743 LARP1Q6PKG0 1096 aaKnown RBP13.75□□□□□ -0.21
PKM-221ENST00000568743 IP6K1Q92551 441 aa13.75□□□□□ -0.21
PKM-221ENST00000568743 CCDC9Q9Y3X0 531 aaKnown RBP13.75□□□□□ -0.21
PKM-221ENST00000568743 COL18A1P39060 1754 aa13.75□□□□□ -0.21
PKM-221ENST00000568743 COL5A2P05997 1499 aaPredicted RBP13.74□□□□□ -0.21
PKM-221ENST00000568743 ATRNO75882 1429 aa13.74□□□□□ -0.21
PKM-221ENST00000568743 NRAPQ86VF7 1730 aa13.74□□□□□ -0.21
PKM-221ENST00000568743 PEAK1Q9H792 1746 aa13.74□□□□□ -0.21
PKM-221ENST00000568743 SOCS7O14512 581 aa13.74□□□□□ -0.21
PKM-221ENST00000568743 HSP90AB2PQ58FF8 381 aa13.74□□□□□ -0.21
PKM-221ENST00000568743 NWD2Q9ULI1 1742 aa13.73□□□□□ -0.21
PKM-221ENST00000568743 RTL1A6NKG5 1358 aa13.73□□□□□ -0.21
PKM-221ENST00000568743 FLT4P35916 1363 aa13.73□□□□□ -0.21
PKM-221ENST00000568743 CSB-PGBD3P0DP91 1061 aa13.73□□□□□ -0.21
PKM-221ENST00000568743 ANKRD24Q8TF21 1146 aa13.73□□□□□ -0.21
PKM-221ENST00000568743 TRPC5Q9UL62 973 aaPredicted RBP13.73□□□□□ -0.21
PKM-221ENST00000568743 VPS72Q15906 364 aa13.72□□□□□ -0.21
PKM-221ENST00000568743 USP35Q9P2H5 1018 aa13.72□□□□□ -0.21
PKM-221ENST00000568743 ABCC6O95255 1503 aa13.72□□□□□ -0.21
PKM-221ENST00000568743 BLMP54132 1417 aaPredicted RBP13.72□□□□□ -0.21
PKM-221ENST00000568743 ERBB3P21860 1342 aa13.71□□□□□ -0.21
PKM-221ENST00000568743 MTHFSP49914 203 aa13.71□□□□□ -0.21
PKM-221ENST00000568743 TOM1L2Q6ZVM7 507 aa13.71□□□□□ -0.21
PKM-221ENST00000568743 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.22
PKM-221ENST00000568743 RGPD5Q99666 1765 aa13.71□□□□□ -0.22
PKM-221ENST00000568743 PARD3Q8TEW0 1356 aa13.71□□□□□ -0.22
PKM-221ENST00000568743 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
PKM-221ENST00000568743 WDR17Q8IZU2 1322 aa13.7□□□□□ -0.22
PKM-221ENST00000568743 PPP2R1AP30153 589 aa13.7□□□□□ -0.22
PKM-221ENST00000568743 GJD4Q96KN9 370 aaPredicted RBP13.7□□□□□ -0.22
PKM-221ENST00000568743 NLRP2Q9NX02 1062 aa13.7□□□□□ -0.22
PKM-221ENST00000568743 INSRP06213 1382 aa13.7□□□□□ -0.22
PKM-221ENST00000568743 KIF24Q5T7B8 1368 aa13.7□□□□□ -0.22
PKM-221ENST00000568743 MAP2P11137 1827 aaKnown RBP13.69□□□□□ -0.22
PKM-221ENST00000568743 SPATA31A5Q5VU36 1347 aa13.69□□□□□ -0.22
PKM-221ENST00000568743 SPATA31A7Q8IWB4 1347 aa13.69□□□□□ -0.22
PKM-221ENST00000568743 RXRBP28702 533 aa13.69□□□□□ -0.22
PKM-221ENST00000568743 SPATA31A1Q5TZJ5 1347 aa13.68□□□□□ -0.22
PKM-221ENST00000568743 CRB1P82279 1406 aa13.68□□□□□ -0.22
PKM-221ENST00000568743 RBM6P78332 1123 aaKnown RBP13.68□□□□□ -0.22
PKM-221ENST00000568743 ILDR2Q71H61 639 aa13.68□□□□□ -0.22
PKM-221ENST00000568743 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
PKM-221ENST00000568743 GLI3P10071 1580 aa13.67□□□□□ -0.22
PKM-221ENST00000568743 EIF4A2Q14240 407 aaKnown RBP13.67□□□□□ -0.22
PKM-221ENST00000568743 RALBP1Q15311 655 aa13.67□□□□□ -0.22
PKM-221ENST00000568743 FAM98CQ17RN3 349 aaKnown RBP13.67□□□□□ -0.22
PKM-221ENST00000568743 USHBP1Q8N6Y0 703 aa13.67□□□□□ -0.22
PKM-221ENST00000568743 NBPF6Q5VWK0 638 aa13.66□□□□□ -0.22
PKM-221ENST00000568743 TCP11L2Q8N4U5 519 aa13.66□□□□□ -0.22
PKM-221ENST00000568743 NBPF4Q96M43 638 aa13.66□□□□□ -0.22
PKM-221ENST00000568743 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
PKM-221ENST00000568743 A0A0G2JS52 829 aa13.65□□□□□ -0.22
PKM-221ENST00000568743 MYT1Q01538 1121 aa13.65□□□□□ -0.22
PKM-221ENST00000568743 CARD10Q9BWT7 1032 aa13.65□□□□□ -0.22
PKM-221ENST00000568743 EYA1Q99502 592 aa13.64□□□□□ -0.23
PKM-221ENST00000568743 RGS12O14924 1447 aa13.64□□□□□ -0.23
PKM-221ENST00000568743 MYBBP1AQ9BQG0 1328 aaKnown RBP13.64□□□□□ -0.23
PKM-221ENST00000568743 ANP32CO43423 234 aa13.63□□□□□ -0.23
PKM-221ENST00000568743 IL13P35225 146 aa13.63□□□□□ -0.23
PKM-221ENST00000568743 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
PKM-221ENST00000568743 DIAPH1O60610 1272 aaKnown RBP13.62□□□□□ -0.23
PKM-221ENST00000568743 SEPT12Q8IYM1 358 aa13.62□□□□□ -0.23
PKM-221ENST00000568743 CFAP53Q96M91 514 aa13.62□□□□□ -0.23
PKM-221ENST00000568743 THRAP3Q9Y2W1 955 aaKnown RBP13.62□□□□□ -0.23
PKM-221ENST00000568743 RGPD2P0DJD1 1756 aa13.61□□□□□ -0.23
PKM-221ENST00000568743 BARGINQ6ZT62 677 aa13.61□□□□□ -0.23
PKM-221ENST00000568743 FAM208AQ9UK61 1670 aaKnown RBP13.6□□□□□ -0.23
PKM-221ENST00000568743 ONECUT3O60422 494 aaPredicted RBP13.6□□□□□ -0.23
PKM-221ENST00000568743 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
PKM-221ENST00000568743 U2SURPO15042 1029 aaKnown RBP13.59□□□□□ -0.23
PKM-221ENST00000568743 IL2RBP14784 551 aa13.59□□□□□ -0.23
PKM-221ENST00000568743 AEBP1Q8IUX7 1158 aa13.59□□□□□ -0.23
PKM-221ENST00000568743 THSD7AQ9UPZ6 1657 aa13.59□□□□□ -0.23
PKM-221ENST00000568743 IGSF1Q8N6C5 1336 aa13.59□□□□□ -0.23
PKM-221ENST00000568743 MEGF6O75095 1541 aa13.59□□□□□ -0.23
PKM-221ENST00000568743 HMOX1P09601 288 aa13.58□□□□□ -0.24
PKM-221ENST00000568743 DIEXFQ68CQ4 756 aaKnown RBP13.58□□□□□ -0.24
PKM-221ENST00000568743 NCAPD2Q15021 1401 aa13.57□□□□□ -0.24
PKM-221ENST00000568743 CCDC184Q52MB2 194 aa13.57□□□□□ -0.24
PKM-221ENST00000568743 SULT6B1Q6IMI4 303 aa13.57□□□□□ -0.24
PKM-221ENST00000568743 RAPGEF4Q8WZA2 1011 aa13.57□□□□□ -0.24
PKM-221ENST00000568743 DDB1Q16531 1140 aa13.56□□□□□ -0.24
PKM-221ENST00000568743 FAM182BQ5T319 152 aa13.56□□□□□ -0.24
PKM-221ENST00000568743 CDCA7Q9BWT1 371 aaPredicted RBP13.56□□□□□ -0.24
PKM-221ENST00000568743 RGPD1P0DJD0 1748 aa13.56□□□□□ -0.24
PKM-221ENST00000568743 WNK3Q9BYP7 1800 aa13.55□□□□□ -0.24
PKM-221ENST00000568743 U2AF1L5P0DN76 240 aaPredicted RBP13.55□□□□□ -0.24
PKM-221ENST00000568743 TATP17735 454 aaPredicted RBP13.55□□□□□ -0.24
PKM-221ENST00000568743 U2AF1Q01081 240 aaKnown RBP eCLIP13.55□□□□□ -0.24
PKM-221ENST00000568743 KRT27Q7Z3Y8 459 aa13.55□□□□□ -0.24
PKM-221ENST00000568743 NUDCQ9Y266 331 aa13.55□□□□□ -0.24
PKM-221ENST00000568743 OVOS2A0A0G2JMS6 1433 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms