RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 GCP02774 474 aa17.57■□□□□ 0.4
VPS9D1-207ENST00000568691 TOPAZ1Q8N9V7 1692 aa17.57■□□□□ 0.4
VPS9D1-207ENST00000568691 DDB1Q16531 1140 aa17.56■□□□□ 0.4
VPS9D1-207ENST00000568691 ARXQ96QS3 562 aa17.56■□□□□ 0.4
VPS9D1-207ENST00000568691 STK32BQ9NY57 414 aa17.56■□□□□ 0.4
VPS9D1-207ENST00000568691 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
VPS9D1-207ENST00000568691 ABTB2Q8N961 1025 aa17.55■□□□□ 0.4
VPS9D1-207ENST00000568691 ITSN1Q15811 1721 aa17.55■□□□□ 0.4
VPS9D1-207ENST00000568691 AATKQ6ZMQ8 1374 aa17.54■□□□□ 0.4
VPS9D1-207ENST00000568691 CDK19Q9BWU1 502 aa17.54■□□□□ 0.4
VPS9D1-207ENST00000568691 PAPPAQ13219 1627 aa17.54■□□□□ 0.4
VPS9D1-207ENST00000568691 AXIN2Q9Y2T1 843 aa17.53■□□□□ 0.4
VPS9D1-207ENST00000568691 ARHGEF28Q8N1W1 1705 aaKnown RBP17.52■□□□□ 0.39
VPS9D1-207ENST00000568691 COL18A1P39060 1754 aa17.51■□□□□ 0.39
VPS9D1-207ENST00000568691 WNK3Q9BYP7 1800 aa17.5■□□□□ 0.39
VPS9D1-207ENST00000568691 GPR162Q16538 588 aa17.5■□□□□ 0.39
VPS9D1-207ENST00000568691 ZNF827Q17R98 1081 aa17.5■□□□□ 0.39
VPS9D1-207ENST00000568691 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
VPS9D1-207ENST00000568691 SLIT3O75094 1523 aa17.48■□□□□ 0.39
VPS9D1-207ENST00000568691 NLRP13Q86W25 1043 aa17.48■□□□□ 0.39
VPS9D1-207ENST00000568691 TOM1L2Q6ZVM7 507 aa17.47■□□□□ 0.39
VPS9D1-207ENST00000568691 NLGN2Q8NFZ4 835 aa17.47■□□□□ 0.39
VPS9D1-207ENST00000568691 WDR17Q8IZU2 1322 aa17.47■□□□□ 0.39
VPS9D1-207ENST00000568691 ZBTB7CA1YPR0 619 aa17.46■□□□□ 0.39
VPS9D1-207ENST00000568691 LRRC4BQ9NT99 713 aa17.46■□□□□ 0.39
VPS9D1-207ENST00000568691 KDM2AQ9Y2K7 1162 aa17.46■□□□□ 0.39
VPS9D1-207ENST00000568691 AKAP12Q02952 1782 aa17.45■□□□□ 0.38
VPS9D1-207ENST00000568691 YBX3P16989 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
VPS9D1-207ENST00000568691 COL24A1Q17RW2 1714 aa17.44■□□□□ 0.38
VPS9D1-207ENST00000568691 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
VPS9D1-207ENST00000568691 DCAF11Q8TEB1 546 aa17.42■□□□□ 0.38
VPS9D1-207ENST00000568691 AKT1S1Q96B36 256 aa17.41■□□□□ 0.38
VPS9D1-207ENST00000568691 ACSBG1Q96GR2 724 aa17.41■□□□□ 0.38
VPS9D1-207ENST00000568691 CDCA7Q9BWT1 371 aaPredicted RBP17.41■□□□□ 0.38
VPS9D1-207ENST00000568691 CARD10Q9BWT7 1032 aa17.41■□□□□ 0.38
VPS9D1-207ENST00000568691 CPSF1Q10570 1443 aaKnown RBP17.4■□□□□ 0.38
VPS9D1-207ENST00000568691 PPIP5K1Q6PFW1 1433 aa17.4■□□□□ 0.38
VPS9D1-207ENST00000568691 ATP10DQ9P241 1426 aa17.4■□□□□ 0.38
VPS9D1-207ENST00000568691 NLRP6P59044 892 aa17.4■□□□□ 0.38
VPS9D1-207ENST00000568691 ARHGEF25Q86VW2 580 aa17.4■□□□□ 0.38
VPS9D1-207ENST00000568691 PELP1Q8IZL8 1130 aaKnown RBP17.4■□□□□ 0.38
VPS9D1-207ENST00000568691 TNS2Q63HR2 1409 aa17.39■□□□□ 0.38
VPS9D1-207ENST00000568691 USP6P35125 1406 aa17.38■□□□□ 0.37
VPS9D1-207ENST00000568691 EXOC5O00471 708 aa17.38■□□□□ 0.37
VPS9D1-207ENST00000568691 HSPA6P17066 643 aa17.38■□□□□ 0.37
VPS9D1-207ENST00000568691 KLHL34Q8N239 644 aa17.38■□□□□ 0.37
VPS9D1-207ENST00000568691 PNPLA7Q6ZV29 1317 aa17.38■□□□□ 0.37
VPS9D1-207ENST00000568691 PIK3C2AO00443 1686 aa17.38■□□□□ 0.37
VPS9D1-207ENST00000568691 TRPM1Q7Z4N2 1603 aa17.37■□□□□ 0.37
VPS9D1-207ENST00000568691 RGPD5Q99666 1765 aa17.37■□□□□ 0.37
VPS9D1-207ENST00000568691 CABP2Q9NPB3 220 aa17.36■□□□□ 0.37
VPS9D1-207ENST00000568691 BRD4O60885 1362 aaPredicted RBP17.36■□□□□ 0.37
VPS9D1-207ENST00000568691 SLC16A10Q8TF71 515 aa17.35■□□□□ 0.37
VPS9D1-207ENST00000568691 ADCY9O60503 1353 aa17.35■□□□□ 0.37
VPS9D1-207ENST00000568691 BTAF1O14981 1849 aa17.35■□□□□ 0.37
VPS9D1-207ENST00000568691 ABCC6O95255 1503 aa17.34■□□□□ 0.37
VPS9D1-207ENST00000568691 CABP1Q9NZU7 370 aa17.33■□□□□ 0.36
VPS9D1-207ENST00000568691 TUBGCP6Q96RT7 1819 aa17.33■□□□□ 0.36
VPS9D1-207ENST00000568691 QSER1Q2KHR3 1735 aa17.33■□□□□ 0.36
VPS9D1-207ENST00000568691 NFAT5O94916 1531 aa17.32■□□□□ 0.36
VPS9D1-207ENST00000568691 KCNQ4P56696 695 aa17.32■□□□□ 0.36
VPS9D1-207ENST00000568691 CCDC7Q96M83 1385 aa17.31■□□□□ 0.36
VPS9D1-207ENST00000568691 NBPF1Q3BBV0 1214 aa17.31■□□□□ 0.36
VPS9D1-207ENST00000568691 GRIN3BO60391 1043 aa17.3■□□□□ 0.36
VPS9D1-207ENST00000568691 CSB-PGBD3P0DP91 1061 aa17.3■□□□□ 0.36
VPS9D1-207ENST00000568691 POLD1P28340 1107 aa17.3■□□□□ 0.36
VPS9D1-207ENST00000568691 SRPK2P78362 688 aaKnown RBP17.3■□□□□ 0.36
VPS9D1-207ENST00000568691 STAC3Q96MF2 364 aa17.29■□□□□ 0.36
VPS9D1-207ENST00000568691 SOX12O15370 315 aa17.28■□□□□ 0.36
VPS9D1-207ENST00000568691 GPBP1L1Q9HC44 474 aaPredicted RBP17.28■□□□□ 0.36
VPS9D1-207ENST00000568691 ZNF526Q8TF50 670 aaPredicted RBP17.27■□□□□ 0.36
VPS9D1-207ENST00000568691 TTC21BQ7Z4L5 1316 aa17.26■□□□□ 0.35
VPS9D1-207ENST00000568691 KIF3CO14782 793 aa17.26■□□□□ 0.35
VPS9D1-207ENST00000568691 DNAJC5GQ8N7S2 189 aa17.26■□□□□ 0.35
VPS9D1-207ENST00000568691 SLC27A3Q5K4L6 730 aa17.25■□□□□ 0.35
VPS9D1-207ENST00000568691 ERBB3P21860 1342 aa17.24■□□□□ 0.35
VPS9D1-207ENST00000568691 TFCP2L1Q9NZI6 479 aa17.24■□□□□ 0.35
VPS9D1-207ENST00000568691 NSD2O96028 1365 aa17.24■□□□□ 0.35
VPS9D1-207ENST00000568691 COL23A1Q86Y22 540 aaPredicted RBP17.23■□□□□ 0.35
VPS9D1-207ENST00000568691 KCNH5Q8NCM2 988 aa17.23■□□□□ 0.35
VPS9D1-207ENST00000568691 RAB3GAP2Q9H2M9 1393 aa17.23■□□□□ 0.35
VPS9D1-207ENST00000568691 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
VPS9D1-207ENST00000568691 CENPJQ9HC77 1338 aaPredicted RBP17.22■□□□□ 0.35
VPS9D1-207ENST00000568691 IL2RBP14784 551 aa17.22■□□□□ 0.35
VPS9D1-207ENST00000568691 MSL1Q68DK7 614 aa17.21■□□□□ 0.35
VPS9D1-207ENST00000568691 KIAA1210Q9ULL0 1709 aa17.21■□□□□ 0.35
VPS9D1-207ENST00000568691 NLRP2Q9NX02 1062 aa17.2■□□□□ 0.34
VPS9D1-207ENST00000568691 COL13A1Q5TAT6 717 aaPredicted RBP17.18■□□□□ 0.34
VPS9D1-207ENST00000568691 LY75O60449 1722 aa17.18■□□□□ 0.34
VPS9D1-207ENST00000568691 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
VPS9D1-207ENST00000568691 PRIM1P49642 420 aaKnown RBP17.16■□□□□ 0.34
VPS9D1-207ENST00000568691 CD2APQ9Y5K6 639 aa17.16■□□□□ 0.34
VPS9D1-207ENST00000568691 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
VPS9D1-207ENST00000568691 DDX54Q8TDD1 881 aaKnown RBP17.15■□□□□ 0.34
VPS9D1-207ENST00000568691 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
VPS9D1-207ENST00000568691 WWC3Q9ULE0 1092 aa17.15■□□□□ 0.34
VPS9D1-207ENST00000568691 KAT6BQ8WYB5 2073 aa17.15■□□□□ 0.34
VPS9D1-207ENST00000568691 APLP1P51693 650 aa17.14■□□□□ 0.33
VPS9D1-207ENST00000568691 AMIGO3Q86WK7 504 aa17.14■□□□□ 0.33
VPS9D1-207ENST00000568691 ZNF692Q9BU19 519 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms