RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 CDK12Q9NYV4 1490 aaPredicted RBP10.37□□□□□ -0.75
SCAPER-221ENST00000568549 ARHGEF25Q86VW2 580 aa10.37□□□□□ -0.75
SCAPER-221ENST00000568549 POLKQ9UBT6 870 aa10.37□□□□□ -0.75
SCAPER-221ENST00000568549 NWD2Q9ULI1 1742 aa10.37□□□□□ -0.75
SCAPER-221ENST00000568549 EMILIN1Q9Y6C2 1016 aa10.37□□□□□ -0.75
SCAPER-221ENST00000568549 RTL1A6NKG5 1358 aa10.37□□□□□ -0.75
SCAPER-221ENST00000568549 KIF24Q5T7B8 1368 aa10.37□□□□□ -0.75
SCAPER-221ENST00000568549 PPM1GO15355 546 aaPredicted RBP10.36□□□□□ -0.75
SCAPER-221ENST00000568549 ADAMTS2O95450 1211 aa10.36□□□□□ -0.75
SCAPER-221ENST00000568549 AMPHP49418 695 aa10.36□□□□□ -0.75
SCAPER-221ENST00000568549 MTHFSP49914 203 aa10.36□□□□□ -0.75
SCAPER-221ENST00000568549 PRDM11Q9NQV5 511 aa10.36□□□□□ -0.75
SCAPER-221ENST00000568549 FAM208AQ9UK61 1670 aaKnown RBP10.36□□□□□ -0.75
SCAPER-221ENST00000568549 FLT4P35916 1363 aa10.36□□□□□ -0.75
SCAPER-221ENST00000568549 NRAPQ86VF7 1730 aa10.36□□□□□ -0.75
SCAPER-221ENST00000568549 RGPD2P0DJD1 1756 aa10.35□□□□□ -0.75
SCAPER-221ENST00000568549 HOXC9P31274 260 aa10.35□□□□□ -0.75
SCAPER-221ENST00000568549 CHRNA2Q15822 529 aa10.35□□□□□ -0.75
SCAPER-221ENST00000568549 MEX3CQ5U5Q3 659 aaKnown RBP10.35□□□□□ -0.75
SCAPER-221ENST00000568549 BLMP54132 1417 aaPredicted RBP10.34□□□□□ -0.75
SCAPER-221ENST00000568549 C1QBPQ07021 282 aaKnown RBP10.34□□□□□ -0.75
SCAPER-221ENST00000568549 MIER1Q8N108 512 aa10.34□□□□□ -0.75
SCAPER-221ENST00000568549 IP6K1Q92551 441 aa10.34□□□□□ -0.75
SCAPER-221ENST00000568549 CFAP53Q96M91 514 aa10.34□□□□□ -0.75
SCAPER-221ENST00000568549 COL3A1P02461 1466 aaPredicted RBP10.34□□□□□ -0.75
SCAPER-221ENST00000568549 CAMTA1Q9Y6Y1 1673 aa10.34□□□□□ -0.75
SCAPER-221ENST00000568549 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.33□□□□□ -0.76
SCAPER-221ENST00000568549 FAM83GA6ND36 823 aa10.33□□□□□ -0.76
SCAPER-221ENST00000568549 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
SCAPER-221ENST00000568549 INSRP06213 1382 aa10.33□□□□□ -0.76
SCAPER-221ENST00000568549 COL5A2P05997 1499 aaPredicted RBP10.32□□□□□ -0.76
SCAPER-221ENST00000568549 HSP90AB2PQ58FF8 381 aa10.32□□□□□ -0.76
SCAPER-221ENST00000568549 C8orf37Q96NL8 207 aa10.32□□□□□ -0.76
SCAPER-221ENST00000568549 AXIN2Q9Y2T1 843 aa10.32□□□□□ -0.76
SCAPER-221ENST00000568549 SLIT2O94813 1529 aa10.32□□□□□ -0.76
SCAPER-221ENST00000568549 RGPD1P0DJD0 1748 aa10.31□□□□□ -0.76
SCAPER-221ENST00000568549 ANKRD24Q8TF21 1146 aa10.31□□□□□ -0.76
SCAPER-221ENST00000568549 NGLY1Q96IV0 654 aa10.31□□□□□ -0.76
SCAPER-221ENST00000568549 BTG4Q9NY30 223 aa10.31□□□□□ -0.76
SCAPER-221ENST00000568549 CCER2I3L3R5 266 aa10.3□□□□□ -0.76
SCAPER-221ENST00000568549 DIAPH1O60610 1272 aaKnown RBP10.3□□□□□ -0.76
SCAPER-221ENST00000568549 EIF4A2Q14240 407 aaKnown RBP10.3□□□□□ -0.76
SCAPER-221ENST00000568549 CCDC184Q52MB2 194 aa10.3□□□□□ -0.76
SCAPER-221ENST00000568549 LTV1Q96GA3 475 aaPredicted RBP10.3□□□□□ -0.76
SCAPER-221ENST00000568549 MRS2Q9HD23 443 aa10.3□□□□□ -0.76
SCAPER-221ENST00000568549 ERBB3P21860 1342 aa10.3□□□□□ -0.76
SCAPER-221ENST00000568549 WNK3Q9BYP7 1800 aa10.29□□□□□ -0.76
SCAPER-221ENST00000568549 CSB-PGBD3P0DP91 1061 aa10.29□□□□□ -0.76
SCAPER-221ENST00000568549 EVA1CP58658 441 aa10.29□□□□□ -0.76
SCAPER-221ENST00000568549 STRN4Q9NRL3 753 aa10.29□□□□□ -0.76
SCAPER-221ENST00000568549 IL13P35225 146 aa10.28□□□□□ -0.76
SCAPER-221ENST00000568549 FNBP4Q8N3X1 1017 aaPredicted RBP10.28□□□□□ -0.76
SCAPER-221ENST00000568549 NUDCQ9Y266 331 aa10.28□□□□□ -0.76
SCAPER-221ENST00000568549 BCL9LQ86UU0 1499 aa10.28□□□□□ -0.76
SCAPER-221ENST00000568549 AFF2P51816 1311 aa10.28□□□□□ -0.76
SCAPER-221ENST00000568549 WDR17Q8IZU2 1322 aa10.28□□□□□ -0.76
SCAPER-221ENST00000568549 CRB1P82279 1406 aa10.27□□□□□ -0.77
SCAPER-221ENST00000568549 U2SURPO15042 1029 aaKnown RBP10.27□□□□□ -0.77
SCAPER-221ENST00000568549 WDR43Q15061 677 aaKnown RBP eCLIP10.27□□□□□ -0.77
SCAPER-221ENST00000568549 UNC5CLQ8IV45 518 aa10.27□□□□□ -0.77
SCAPER-221ENST00000568549 USP21Q9UK80 565 aa10.27□□□□□ -0.77
SCAPER-221ENST00000568549 LARP1Q6PKG0 1096 aaKnown RBP10.26□□□□□ -0.77
SCAPER-221ENST00000568549 TOM1L2Q6ZVM7 507 aa10.26□□□□□ -0.77
SCAPER-221ENST00000568549 EYA1Q99502 592 aa10.26□□□□□ -0.77
SCAPER-221ENST00000568549 NLRP2Q9NX02 1062 aa10.26□□□□□ -0.77
SCAPER-221ENST00000568549 PARP4Q9UKK3 1724 aaKnown RBP10.26□□□□□ -0.77
SCAPER-221ENST00000568549 IGSF1Q8N6C5 1336 aa10.26□□□□□ -0.77
SCAPER-221ENST00000568549 NCAPD2Q15021 1401 aa10.25□□□□□ -0.77
SCAPER-221ENST00000568549 U2AF1L5P0DN76 240 aaPredicted RBP10.25□□□□□ -0.77
SCAPER-221ENST00000568549 U2AF1Q01081 240 aaKnown RBP eCLIP10.25□□□□□ -0.77
SCAPER-221ENST00000568549 NBPF6Q5VWK0 638 aa10.25□□□□□ -0.77
SCAPER-221ENST00000568549 NBPF4Q96M43 638 aa10.25□□□□□ -0.77
SCAPER-221ENST00000568549 CCDC9Q9Y3X0 531 aaKnown RBP10.25□□□□□ -0.77
SCAPER-221ENST00000568549 VPS72Q15906 364 aa10.24□□□□□ -0.77
SCAPER-221ENST00000568549 USHBP1Q8N6Y0 703 aa10.24□□□□□ -0.77
SCAPER-221ENST00000568549 PNISRQ8TF01 805 aaKnown RBP10.24□□□□□ -0.77
SCAPER-221ENST00000568549 CARD10Q9BWT7 1032 aa10.24□□□□□ -0.77
SCAPER-221ENST00000568549 ATRNO75882 1429 aa10.24□□□□□ -0.77
SCAPER-221ENST00000568549 GLI3P10071 1580 aa10.23□□□□□ -0.77
SCAPER-221ENST00000568549 HMOX1P09601 288 aa10.23□□□□□ -0.77
SCAPER-221ENST00000568549 ZNF772Q68DY9 489 aaPredicted RBP10.23□□□□□ -0.77
SCAPER-221ENST00000568549 SULT6B1Q6IMI4 303 aa10.23□□□□□ -0.77
SCAPER-221ENST00000568549 FAM9BQ8IZU0 186 aa10.23□□□□□ -0.77
SCAPER-221ENST00000568549 USP35Q9P2H5 1018 aa10.23□□□□□ -0.77
SCAPER-221ENST00000568549 TRPC5Q9UL62 973 aaPredicted RBP10.23□□□□□ -0.77
SCAPER-221ENST00000568549 SPATA31A1Q5TZJ5 1347 aa10.23□□□□□ -0.77
SCAPER-221ENST00000568549 SPATA31A5Q5VU36 1347 aa10.23□□□□□ -0.77
SCAPER-221ENST00000568549 SPATA31A7Q8IWB4 1347 aa10.23□□□□□ -0.77
SCAPER-221ENST00000568549 KDRP35968 1356 aa10.23□□□□□ -0.77
SCAPER-221ENST00000568549 PKD1L3Q7Z443 1732 aa10.22□□□□□ -0.77
SCAPER-221ENST00000568549 AEBP1Q8IUX7 1158 aa10.22□□□□□ -0.77
SCAPER-221ENST00000568549 ADAMTS8Q9UP79 889 aa10.22□□□□□ -0.77
SCAPER-221ENST00000568549 DLG5Q8TDM6 1919 aa10.21□□□□□ -0.77
SCAPER-221ENST00000568549 FCHSD2O94868 740 aa10.21□□□□□ -0.77
SCAPER-221ENST00000568549 TCP11L2Q8N4U5 519 aa10.21□□□□□ -0.77
SCAPER-221ENST00000568549 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
SCAPER-221ENST00000568549 PNNQ9H307 717 aaKnown RBP10.21□□□□□ -0.77
SCAPER-221ENST00000568549 THRAP3Q9Y2W1 955 aaKnown RBP10.21□□□□□ -0.77
SCAPER-221ENST00000568549 MEGF6O75095 1541 aa10.21□□□□□ -0.78
SCAPER-221ENST00000568549 SHANK3Q9BYB0 1731 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms