RNA–Protein interactions for RNA: ENST00000568509.2

SPG7-219, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-219ENST00000568509 ARHGEF25Q86VW2 580 aa21.22■□□□□ 0.99
SPG7-219ENST00000568509 TONSLQ96HA7 1378 aa21.21■□□□□ 0.99
SPG7-219ENST00000568509 C11orf95C9JLR9 678 aaPredicted RBP21.21■□□□□ 0.99
SPG7-219ENST00000568509 TMC1Q8TDI8 760 aa21.21■□□□□ 0.99
SPG7-219ENST00000568509 SLIT3O75094 1523 aa21.2■□□□□ 0.98
SPG7-219ENST00000568509 CPSF1Q10570 1443 aaKnown RBP21.2■□□□□ 0.98
SPG7-219ENST00000568509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.2■□□□□ 0.98
SPG7-219ENST00000568509 SRCAPQ6ZRS2 3230 aa21.2■□□□□ 0.98
SPG7-219ENST00000568509 PIK3C2AO00443 1686 aa21.19■□□□□ 0.98
SPG7-219ENST00000568509 CSB-PGBD3P0DP91 1061 aa21.19■□□□□ 0.98
SPG7-219ENST00000568509 DDB1Q16531 1140 aa21.19■□□□□ 0.98
SPG7-219ENST00000568509 TNS1Q9HBL0 1735 aaKnown RBP21.19■□□□□ 0.98
SPG7-219ENST00000568509 WDR17Q8IZU2 1322 aa21.17■□□□□ 0.98
SPG7-219ENST00000568509 AKAP12Q02952 1782 aa21.17■□□□□ 0.98
SPG7-219ENST00000568509 PARD3Q8TEW0 1356 aa21.16■□□□□ 0.98
SPG7-219ENST00000568509 SBNO2Q9Y2G9 1366 aa21.16■□□□□ 0.98
SPG7-219ENST00000568509 NBPF14Q5TI25 921 aa21.16■□□□□ 0.98
SPG7-219ENST00000568509 HDGFL2Q7Z4V5 671 aaPredicted RBP21.16■□□□□ 0.98
SPG7-219ENST00000568509 SLC12A5Q9H2X9 1139 aa21.16■□□□□ 0.98
SPG7-219ENST00000568509 CDCA7Q9BWT1 371 aaPredicted RBP21.15■□□□□ 0.98
SPG7-219ENST00000568509 COL18A1P39060 1754 aa21.15■□□□□ 0.98
SPG7-219ENST00000568509 CARD10Q9BWT7 1032 aa21.14■□□□□ 0.98
SPG7-219ENST00000568509 PARP4Q9UKK3 1724 aaKnown RBP21.13■□□□□ 0.97
SPG7-219ENST00000568509 NME9Q86XW9 330 aa21.12■□□□□ 0.97
SPG7-219ENST00000568509 RGPD5Q99666 1765 aa21.11■□□□□ 0.97
SPG7-219ENST00000568509 EXOC5O00471 708 aa21.11■□□□□ 0.97
SPG7-219ENST00000568509 TRIM26Q12899 539 aaPredicted RBP21.11■□□□□ 0.97
SPG7-219ENST00000568509 TERF2IPQ9NYB0 399 aa21.11■□□□□ 0.97
SPG7-219ENST00000568509 OVOS2A0A0G2JMS6 1433 aa21.11■□□□□ 0.97
SPG7-219ENST00000568509 OVOS2A0A0J9YW53 1432 aa21.11■□□□□ 0.97
SPG7-219ENST00000568509 OVOS2Q6IE36 1432 aa21.11■□□□□ 0.97
SPG7-219ENST00000568509 LRP5O75197 1615 aa21.11■□□□□ 0.97
SPG7-219ENST00000568509 SLC4A2P04920 1241 aa21.1■□□□□ 0.97
SPG7-219ENST00000568509 PUS7Q96PZ0 661 aaKnown RBP21.1■□□□□ 0.97
SPG7-219ENST00000568509 MARCH10Q8NA82 808 aaPredicted RBP21.1■□□□□ 0.97
SPG7-219ENST00000568509 USP31Q70CQ4 1352 aa21.09■□□□□ 0.97
SPG7-219ENST00000568509 BCL11BQ9C0K0 894 aaPredicted RBP21.09■□□□□ 0.97
SPG7-219ENST00000568509 ST20-MTHFSA0A0A6YYL1 179 aa21.08■□□□□ 0.96
SPG7-219ENST00000568509 PLSCR1O15162 318 aa21.08■□□□□ 0.96
SPG7-219ENST00000568509 SLC24A1O60721 1099 aa21.08■□□□□ 0.96
SPG7-219ENST00000568509 CD163L1Q9NR16 1453 aa21.06■□□□□ 0.96
SPG7-219ENST00000568509 MON2Q7Z3U7 1717 aa21.06■□□□□ 0.96
SPG7-219ENST00000568509 NLRP2Q9NX02 1062 aa21.06■□□□□ 0.96
SPG7-219ENST00000568509 NFAT5O94916 1531 aa21.06■□□□□ 0.96
SPG7-219ENST00000568509 PTF1AQ7RTS3 328 aa21.05■□□□□ 0.96
SPG7-219ENST00000568509 CCDC7Q96M83 1385 aa21.05■□□□□ 0.96
SPG7-219ENST00000568509 LRRC37A3O60309 1634 aa21.04■□□□□ 0.96
SPG7-219ENST00000568509 TESK2Q96S53 571 aa21.04■□□□□ 0.96
SPG7-219ENST00000568509 EDC4Q6P2E9 1401 aaKnown RBP21.03■□□□□ 0.96
SPG7-219ENST00000568509 SBF2Q86WG5 1849 aa21.03■□□□□ 0.96
SPG7-219ENST00000568509 PEAK1Q9H792 1746 aa21.03■□□□□ 0.96
SPG7-219ENST00000568509 A0A1W2PP64 1363 aa21.02■□□□□ 0.96
SPG7-219ENST00000568509 RREB1Q92766 1687 aa21.02■□□□□ 0.96
SPG7-219ENST00000568509 ERBB3P21860 1342 aa21.01■□□□□ 0.95
SPG7-219ENST00000568509 ANKRD24Q8TF21 1146 aa21.01■□□□□ 0.95
SPG7-219ENST00000568509 NUP188Q5SRE5 1749 aa21■□□□□ 0.95
SPG7-219ENST00000568509 IL2RBP14784 551 aa20.99■□□□□ 0.95
SPG7-219ENST00000568509 BCL9O00512 1426 aa20.99■□□□□ 0.95
SPG7-219ENST00000568509 ABCC6O95255 1503 aa20.99■□□□□ 0.95
SPG7-219ENST00000568509 PROM2Q8N271 834 aa20.98■□□□□ 0.95
SPG7-219ENST00000568509 COG3Q96JB2 828 aa20.98■□□□□ 0.95
SPG7-219ENST00000568509 SPON1Q9HCB6 807 aa20.98■□□□□ 0.95
SPG7-219ENST00000568509 WNK3Q9BYP7 1800 aa20.98■□□□□ 0.95
SPG7-219ENST00000568509 IP6K1Q92551 441 aa20.97■□□□□ 0.95
SPG7-219ENST00000568509 NINLQ9Y2I6 1382 aa20.97■□□□□ 0.95
SPG7-219ENST00000568509 LTN1O94822 1766 aa20.97■□□□□ 0.95
SPG7-219ENST00000568509 KCNQ2O43526 872 aa20.97■□□□□ 0.95
SPG7-219ENST00000568509 LTV1Q96GA3 475 aaPredicted RBP20.97■□□□□ 0.95
SPG7-219ENST00000568509 TMF1P82094 1093 aa20.96■□□□□ 0.95
SPG7-219ENST00000568509 ACSBG1Q96GR2 724 aa20.96■□□□□ 0.95
SPG7-219ENST00000568509 USP54Q70EL1 1684 aa20.96■□□□□ 0.95
SPG7-219ENST00000568509 TXNRD1Q16881 649 aa20.95■□□□□ 0.94
SPG7-219ENST00000568509 PPP1R1BQ9UD71 204 aaPredicted RBP20.95■□□□□ 0.94
SPG7-219ENST00000568509 KAT6BQ8WYB5 2073 aa20.94■□□□□ 0.94
SPG7-219ENST00000568509 FBLN1P23142 703 aa20.94■□□□□ 0.94
SPG7-219ENST00000568509 AMPHP49418 695 aa20.94■□□□□ 0.94
SPG7-219ENST00000568509 ANO8Q9HCE9 1232 aaPredicted RBP20.93■□□□□ 0.94
SPG7-219ENST00000568509 TNS2Q63HR2 1409 aa20.92■□□□□ 0.94
SPG7-219ENST00000568509 MYCNP04198 464 aaPredicted RBP20.92■□□□□ 0.94
SPG7-219ENST00000568509 RGPD3A6NKT7 1758 aaPredicted RBP20.91■□□□□ 0.94
SPG7-219ENST00000568509 RGPD4Q7Z3J3 1758 aa20.91■□□□□ 0.94
SPG7-219ENST00000568509 STK32BQ9NY57 414 aa20.91■□□□□ 0.94
SPG7-219ENST00000568509 DDX54Q8TDD1 881 aaKnown RBP20.9■□□□□ 0.94
SPG7-219ENST00000568509 MAP3K19Q56UN5 1328 aa20.9■□□□□ 0.94
SPG7-219ENST00000568509 ANKRD36BQ8N2N9 1353 aa20.89■□□□□ 0.94
SPG7-219ENST00000568509 USP47Q96K76 1375 aa20.89■□□□□ 0.94
SPG7-219ENST00000568509 HOXC9P31274 260 aa20.89■□□□□ 0.93
SPG7-219ENST00000568509 CDCA8Q53HL2 280 aa20.89■□□□□ 0.93
SPG7-219ENST00000568509 FYB1O15117 783 aa20.88■□□□□ 0.93
SPG7-219ENST00000568509 PDGFDQ9GZP0 370 aaPredicted RBP20.88■□□□□ 0.93
SPG7-219ENST00000568509 SLC15A2Q16348 729 aa20.87■□□□□ 0.93
SPG7-219ENST00000568509 GGNBP2Q9H3C7 697 aa20.87■□□□□ 0.93
SPG7-219ENST00000568509 ZBTB7AO95365 584 aa20.85■□□□□ 0.93
SPG7-219ENST00000568509 RRS1Q15050 365 aaKnown RBP20.85■□□□□ 0.93
SPG7-219ENST00000568509 DCAF8L1A6NGE4 600 aa20.85■□□□□ 0.93
SPG7-219ENST00000568509 PCGF6Q9BYE7 350 aa20.85■□□□□ 0.93
SPG7-219ENST00000568509 TIMELESSQ9UNS1 1208 aa20.85■□□□□ 0.93
SPG7-219ENST00000568509 ATF5Q9Y2D1 282 aaPredicted RBP20.84■□□□□ 0.93
SPG7-219ENST00000568509 ZCRB1Q8TBF4 217 aaKnown RBP20.82■□□□□ 0.92
SPG7-219ENST00000568509 NHSQ6T4R5 1651 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms