RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 UTRNP46939 3433 aa21.57■■□□□ 1.04
COMMD4-223ENST00000568301 COL18A1P39060 1754 aa21.56■■□□□ 1.04
COMMD4-223ENST00000568301 ANO8Q9HCE9 1232 aaPredicted RBP21.56■■□□□ 1.04
COMMD4-223ENST00000568301 AXIN2Q9Y2T1 843 aa21.56■■□□□ 1.04
COMMD4-223ENST00000568301 RGPD3A6NKT7 1758 aaPredicted RBP21.55■■□□□ 1.04
COMMD4-223ENST00000568301 RGPD4Q7Z3J3 1758 aa21.55■■□□□ 1.04
COMMD4-223ENST00000568301 PIK3C2AO00443 1686 aa21.54■■□□□ 1.04
COMMD4-223ENST00000568301 ROCK2O75116 1388 aaKnown RBP21.54■■□□□ 1.04
COMMD4-223ENST00000568301 NEUROD1Q13562 356 aa21.54■■□□□ 1.04
COMMD4-223ENST00000568301 BCL11BQ9C0K0 894 aaPredicted RBP21.54■■□□□ 1.04
COMMD4-223ENST00000568301 PROM2Q8N271 834 aa21.53■■□□□ 1.04
COMMD4-223ENST00000568301 MARCH10Q8NA82 808 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-223ENST00000568301 NINLQ9Y2I6 1382 aa21.52■■□□□ 1.04
COMMD4-223ENST00000568301 KCNH5Q8NCM2 988 aa21.52■■□□□ 1.04
COMMD4-223ENST00000568301 PDGFDQ9GZP0 370 aaPredicted RBP21.52■■□□□ 1.04
COMMD4-223ENST00000568301 TTC21BQ7Z4L5 1316 aa21.52■■□□□ 1.03
COMMD4-223ENST00000568301 WDR17Q8IZU2 1322 aa21.52■■□□□ 1.03
COMMD4-223ENST00000568301 WNK3Q9BYP7 1800 aa21.51■■□□□ 1.03
COMMD4-223ENST00000568301 TTC21AQ8NDW8 1320 aa21.51■■□□□ 1.03
COMMD4-223ENST00000568301 AKAP12Q02952 1782 aa21.51■■□□□ 1.03
COMMD4-223ENST00000568301 RGPD5Q99666 1765 aa21.51■■□□□ 1.03
COMMD4-223ENST00000568301 ARHGEF25Q86VW2 580 aa21.5■■□□□ 1.03
COMMD4-223ENST00000568301 CASZ1Q86V15 1759 aa21.5■■□□□ 1.03
COMMD4-223ENST00000568301 CPSF1Q10570 1443 aaKnown RBP21.49■■□□□ 1.03
COMMD4-223ENST00000568301 DCAF8L1A6NGE4 600 aa21.48■■□□□ 1.03
COMMD4-223ENST00000568301 SOX12O15370 315 aa21.48■■□□□ 1.03
COMMD4-223ENST00000568301 CDCA7Q9BWT1 371 aaPredicted RBP21.48■■□□□ 1.03
COMMD4-223ENST00000568301 BCL9O00512 1426 aa21.46■■□□□ 1.03
COMMD4-223ENST00000568301 ZBTB7AO95365 584 aa21.46■■□□□ 1.03
COMMD4-223ENST00000568301 CARD10Q9BWT7 1032 aa21.46■■□□□ 1.03
COMMD4-223ENST00000568301 SBNO2Q9Y2G9 1366 aa21.46■■□□□ 1.03
COMMD4-223ENST00000568301 CSB-PGBD3P0DP91 1061 aa21.45■■□□□ 1.02
COMMD4-223ENST00000568301 KTN1Q86UP2 1357 aaKnown RBP21.45■■□□□ 1.02
COMMD4-223ENST00000568301 EXOC5O00471 708 aa21.43■■□□□ 1.02
COMMD4-223ENST00000568301 PTGER2P43116 358 aa21.43■■□□□ 1.02
COMMD4-223ENST00000568301 TXNRD1Q16881 649 aa21.43■■□□□ 1.02
COMMD4-223ENST00000568301 ATF5Q9Y2D1 282 aaPredicted RBP21.43■■□□□ 1.02
COMMD4-223ENST00000568301 MON2Q7Z3U7 1717 aa21.41■■□□□ 1.02
COMMD4-223ENST00000568301 MYOM1P52179 1685 aa21.41■■□□□ 1.02
COMMD4-223ENST00000568301 NFAT5O94916 1531 aa21.4■■□□□ 1.02
COMMD4-223ENST00000568301 SLC15A2Q16348 729 aa21.4■■□□□ 1.02
COMMD4-223ENST00000568301 CARD11Q9BXL7 1154 aa21.4■■□□□ 1.02
COMMD4-223ENST00000568301 STK32BQ9NY57 414 aa21.4■■□□□ 1.02
COMMD4-223ENST00000568301 USP31Q70CQ4 1352 aa21.39■■□□□ 1.02
COMMD4-223ENST00000568301 ABCC6O95255 1503 aa21.39■■□□□ 1.01
COMMD4-223ENST00000568301 CCDC7Q96M83 1385 aa21.37■■□□□ 1.01
COMMD4-223ENST00000568301 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.36■■□□□ 1.01
COMMD4-223ENST00000568301 ACSBG1Q96GR2 724 aa21.36■■□□□ 1.01
COMMD4-223ENST00000568301 TNS2Q63HR2 1409 aa21.36■■□□□ 1.01
COMMD4-223ENST00000568301 USP54Q70EL1 1684 aa21.35■■□□□ 1.01
COMMD4-223ENST00000568301 CD163L1Q9NR16 1453 aa21.35■■□□□ 1.01
COMMD4-223ENST00000568301 PUS7Q96PZ0 661 aaKnown RBP21.35■■□□□ 1.01
COMMD4-223ENST00000568301 FHDC1Q9C0D6 1143 aaPredicted RBP21.35■■□□□ 1.01
COMMD4-223ENST00000568301 HDGFL2Q7Z4V5 671 aaPredicted RBP21.34■■□□□ 1.01
COMMD4-223ENST00000568301 TMC1Q8TDI8 760 aa21.34■■□□□ 1.01
COMMD4-223ENST00000568301 SYT17Q9BSW7 474 aa21.34■■□□□ 1.01
COMMD4-223ENST00000568301 NHSQ6T4R5 1651 aa21.34■■□□□ 1.01
COMMD4-223ENST00000568301 NME9Q86XW9 330 aa21.33■■□□□ 1.01
COMMD4-223ENST00000568301 SGIP1Q9BQI5 828 aa21.33■■□□□ 1.01
COMMD4-223ENST00000568301 MTFR1LQ9H019 292 aa21.33■■□□□ 1.01
COMMD4-223ENST00000568301 SLC12A5Q9H2X9 1139 aa21.33■■□□□ 1.01
COMMD4-223ENST00000568301 GOLGB1Q14789 3259 aaKnown RBP21.32■■□□□ 1
COMMD4-223ENST00000568301 NLRP2Q9NX02 1062 aa21.32■■□□□ 1
COMMD4-223ENST00000568301 TERF2IPQ9NYB0 399 aa21.32■■□□□ 1
COMMD4-223ENST00000568301 ERBB3P21860 1342 aa21.31■■□□□ 1
COMMD4-223ENST00000568301 LTN1O94822 1766 aa21.31■■□□□ 1
COMMD4-223ENST00000568301 EDC4Q6P2E9 1401 aaKnown RBP21.3■■□□□ 1
COMMD4-223ENST00000568301 ZNF784Q8NCA9 323 aaPredicted RBP21.3■■□□□ 1
COMMD4-223ENST00000568301 TONSLQ96HA7 1378 aa21.3■■□□□ 1
COMMD4-223ENST00000568301 KAT6BQ8WYB5 2073 aa21.29■■□□□ 1
COMMD4-223ENST00000568301 IL2RBP14784 551 aa21.29■■□□□ 1
COMMD4-223ENST00000568301 BTAF1O14981 1849 aa21.27■■□□□ 1
COMMD4-223ENST00000568301 PAPPAQ13219 1627 aa21.27■■□□□ 1
COMMD4-223ENST00000568301 SLC24A1O60721 1099 aa21.27■■□□□ 1
COMMD4-223ENST00000568301 ANKRD24Q8TF21 1146 aa21.27■■□□□ 1
COMMD4-223ENST00000568301 ZNF827Q17R98 1081 aa21.26■□□□□ 0.99
COMMD4-223ENST00000568301 ARXQ96QS3 562 aa21.26■□□□□ 0.99
COMMD4-223ENST00000568301 LRRC4BQ9NT99 713 aa21.26■□□□□ 0.99
COMMD4-223ENST00000568301 A0A1W2PP64 1363 aa21.25■□□□□ 0.99
COMMD4-223ENST00000568301 CHD4Q14839 1912 aa21.24■□□□□ 0.99
COMMD4-223ENST00000568301 TESK2Q96S53 571 aa21.23■□□□□ 0.99
COMMD4-223ENST00000568301 IP6K1Q92551 441 aa21.22■□□□□ 0.99
COMMD4-223ENST00000568301 ST20-MTHFSA0A0A6YYL1 179 aa21.21■□□□□ 0.99
COMMD4-223ENST00000568301 DDX54Q8TDD1 881 aaKnown RBP21.19■□□□□ 0.98
COMMD4-223ENST00000568301 AKT1S1Q96B36 256 aa21.19■□□□□ 0.98
COMMD4-223ENST00000568301 MAP3K5Q99683 1374 aa21.19■□□□□ 0.98
COMMD4-223ENST00000568301 LTV1Q96GA3 475 aaPredicted RBP21.17■□□□□ 0.98
COMMD4-223ENST00000568301 COG3Q96JB2 828 aa21.17■□□□□ 0.98
COMMD4-223ENST00000568301 FAM208AQ9UK61 1670 aaKnown RBP21.17■□□□□ 0.98
COMMD4-223ENST00000568301 KCNQ4P56696 695 aa21.16■□□□□ 0.98
COMMD4-223ENST00000568301 GPR162Q16538 588 aa21.15■□□□□ 0.98
COMMD4-223ENST00000568301 SLC27A3Q5K4L6 730 aa21.15■□□□□ 0.98
COMMD4-223ENST00000568301 PNPLA7Q6ZV29 1317 aa21.14■□□□□ 0.97
COMMD4-223ENST00000568301 SLC16A10Q8TF71 515 aa21.14■□□□□ 0.97
COMMD4-223ENST00000568301 QSER1Q2KHR3 1735 aa21.14■□□□□ 0.97
COMMD4-223ENST00000568301 MAP3K19Q56UN5 1328 aa21.13■□□□□ 0.97
COMMD4-223ENST00000568301 C1QTNF8P60827 252 aa21.13■□□□□ 0.97
COMMD4-223ENST00000568301 KLHL34Q8N239 644 aa21.13■□□□□ 0.97
COMMD4-223ENST00000568301 SYTL4Q96C24 671 aaPredicted RBP21.13■□□□□ 0.97
COMMD4-223ENST00000568301 FBLN1P23142 703 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms