RNA–Protein interactions for RNA: ENST00000568292.1

CDH3-207, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-207ENST00000568292 ANKRD36BQ8N2N9 1353 aa14.3□□□□□ -0.12
CDH3-207ENST00000568292 HSPA5P11021 654 aaKnown RBP14.29□□□□□ -0.12
CDH3-207ENST00000568292 WDR17Q8IZU2 1322 aa14.29□□□□□ -0.12
CDH3-207ENST00000568292 CRB1P82279 1406 aa14.29□□□□□ -0.12
CDH3-207ENST00000568292 COL5A2P05997 1499 aaPredicted RBP14.28□□□□□ -0.12
CDH3-207ENST00000568292 BLMP54132 1417 aaPredicted RBP14.28□□□□□ -0.12
CDH3-207ENST00000568292 FAM182BQ5T319 152 aa14.28□□□□□ -0.12
CDH3-207ENST00000568292 FAM196AQ6ZSG2 479 aa14.28□□□□□ -0.12
CDH3-207ENST00000568292 MON2Q7Z3U7 1717 aa14.28□□□□□ -0.12
CDH3-207ENST00000568292 LMO7Q8WWI1 1683 aa14.28□□□□□ -0.12
CDH3-207ENST00000568292 FYB1O15117 783 aa14.27□□□□□ -0.13
CDH3-207ENST00000568292 CARD10Q9BWT7 1032 aa14.27□□□□□ -0.13
CDH3-207ENST00000568292 BRWD3Q6RI45 1802 aa14.27□□□□□ -0.13
CDH3-207ENST00000568292 POLR3GLQ9BT43 218 aa14.26□□□□□ -0.13
CDH3-207ENST00000568292 CDCA7Q9BWT1 371 aaPredicted RBP14.26□□□□□ -0.13
CDH3-207ENST00000568292 C11orf95C9JLR9 678 aaPredicted RBP14.25□□□□□ -0.13
CDH3-207ENST00000568292 IP6K1Q92551 441 aa14.25□□□□□ -0.13
CDH3-207ENST00000568292 BAG6P46379 1132 aa14.24□□□□□ -0.13
CDH3-207ENST00000568292 AMPHP49418 695 aa14.24□□□□□ -0.13
CDH3-207ENST00000568292 DDB1Q16531 1140 aa14.24□□□□□ -0.13
CDH3-207ENST00000568292 DEFB132Q7Z7B7 95 aa14.24□□□□□ -0.13
CDH3-207ENST00000568292 CARD14Q9BXL6 1004 aa14.24□□□□□ -0.13
CDH3-207ENST00000568292 GGNBP2Q9H3C7 697 aa14.24□□□□□ -0.13
CDH3-207ENST00000568292 NFAT5O94916 1531 aa14.24□□□□□ -0.13
CDH3-207ENST00000568292 COL18A1P39060 1754 aa14.24□□□□□ -0.13
CDH3-207ENST00000568292 EXOC5O00471 708 aa14.23□□□□□ -0.13
CDH3-207ENST00000568292 ANKRD24Q8TF21 1146 aa14.23□□□□□ -0.13
CDH3-207ENST00000568292 NLRP2Q9NX02 1062 aa14.23□□□□□ -0.13
CDH3-207ENST00000568292 THSD7AQ9UPZ6 1657 aa14.23□□□□□ -0.13
CDH3-207ENST00000568292 OVOS2A0A0J9YW53 1432 aa14.23□□□□□ -0.13
CDH3-207ENST00000568292 OVOS2Q6IE36 1432 aa14.23□□□□□ -0.13
CDH3-207ENST00000568292 CCDC7Q96M83 1385 aa14.22□□□□□ -0.13
CDH3-207ENST00000568292 TRIM37O94972 964 aa14.21□□□□□ -0.13
CDH3-207ENST00000568292 FBLN1P23142 703 aa14.21□□□□□ -0.13
CDH3-207ENST00000568292 ERBB3P21860 1342 aa14.2□□□□□ -0.14
CDH3-207ENST00000568292 MAP3K19Q56UN5 1328 aa14.2□□□□□ -0.14
CDH3-207ENST00000568292 ABCC6O95255 1503 aa14.2□□□□□ -0.14
CDH3-207ENST00000568292 USP54Q70EL1 1684 aa14.2□□□□□ -0.14
CDH3-207ENST00000568292 APBA3O96018 575 aa14.19□□□□□ -0.14
CDH3-207ENST00000568292 HOXC9P31274 260 aa14.19□□□□□ -0.14
CDH3-207ENST00000568292 EN1Q05925 392 aaPredicted RBP14.19□□□□□ -0.14
CDH3-207ENST00000568292 LTV1Q96GA3 475 aaPredicted RBP14.19□□□□□ -0.14
CDH3-207ENST00000568292 RRS1Q15050 365 aaKnown RBP14.18□□□□□ -0.14
CDH3-207ENST00000568292 CGNL1Q0VF96 1302 aa14.17□□□□□ -0.14
CDH3-207ENST00000568292 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
CDH3-207ENST00000568292 IL2RBP14784 551 aa14.17□□□□□ -0.14
CDH3-207ENST00000568292 MARCH10Q8NA82 808 aaPredicted RBP14.17□□□□□ -0.14
CDH3-207ENST00000568292 PANK3Q9H999 370 aa14.17□□□□□ -0.14
CDH3-207ENST00000568292 RGPD5Q99666 1765 aa14.17□□□□□ -0.14
CDH3-207ENST00000568292 CAMKK2Q96RR4 588 aa14.15□□□□□ -0.14
CDH3-207ENST00000568292 EZH2Q15910 746 aaKnown RBP14.14□□□□□ -0.15
CDH3-207ENST00000568292 OVOS2A0A0G2JMS6 1433 aa14.14□□□□□ -0.15
CDH3-207ENST00000568292 DISP2A7MBM2 1401 aa14.14□□□□□ -0.15
CDH3-207ENST00000568292 PARP4Q9UKK3 1724 aaKnown RBP14.13□□□□□ -0.15
CDH3-207ENST00000568292 RTL1A6NKG5 1358 aa14.13□□□□□ -0.15
CDH3-207ENST00000568292 BCL11BQ9C0K0 894 aaPredicted RBP14.13□□□□□ -0.15
CDH3-207ENST00000568292 KIF24Q5T7B8 1368 aa14.12□□□□□ -0.15
CDH3-207ENST00000568292 LTN1O94822 1766 aa14.12□□□□□ -0.15
CDH3-207ENST00000568292 PPM1GO15355 546 aaPredicted RBP14.12□□□□□ -0.15
CDH3-207ENST00000568292 HSP90AB2PQ58FF8 381 aa14.12□□□□□ -0.15
CDH3-207ENST00000568292 KNSTRNQ9Y448 316 aa14.12□□□□□ -0.15
CDH3-207ENST00000568292 RGPD1P0DJD0 1748 aa14.11□□□□□ -0.15
CDH3-207ENST00000568292 NBPF6Q5VWK0 638 aa14.11□□□□□ -0.15
CDH3-207ENST00000568292 NBPF4Q96M43 638 aa14.11□□□□□ -0.15
CDH3-207ENST00000568292 MYOM1P52179 1685 aa14.1□□□□□ -0.15
CDH3-207ENST00000568292 INSRP06213 1382 aa14.1□□□□□ -0.15
CDH3-207ENST00000568292 BCL9O00512 1426 aa14.1□□□□□ -0.15
CDH3-207ENST00000568292 PLSCR1O15162 318 aa14.1□□□□□ -0.15
CDH3-207ENST00000568292 DDX54Q8TDD1 881 aaKnown RBP14.1□□□□□ -0.15
CDH3-207ENST00000568292 EMILIN1Q9Y6C2 1016 aa14.1□□□□□ -0.15
CDH3-207ENST00000568292 FLT4P35916 1363 aa14.09□□□□□ -0.15
CDH3-207ENST00000568292 PARD3Q8TEW0 1356 aa14.09□□□□□ -0.15
CDH3-207ENST00000568292 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
CDH3-207ENST00000568292 NBPF14Q5TI25 921 aa14.09□□□□□ -0.15
CDH3-207ENST00000568292 ZCRB1Q8TBF4 217 aaKnown RBP14.09□□□□□ -0.15
CDH3-207ENST00000568292 POLKQ9UBT6 870 aa14.09□□□□□ -0.15
CDH3-207ENST00000568292 KIF7Q2M1P5 1343 aa14.09□□□□□ -0.15
CDH3-207ENST00000568292 TNNT2P45379 298 aaPredicted RBP14.08□□□□□ -0.16
CDH3-207ENST00000568292 MORC1Q86VD1 984 aa14.08□□□□□ -0.16
CDH3-207ENST00000568292 RAPGEF4Q8WZA2 1011 aa14.08□□□□□ -0.16
CDH3-207ENST00000568292 WASHC2AQ641Q2 1341 aa14.08□□□□□ -0.16
CDH3-207ENST00000568292 LRRC37A3O60309 1634 aa14.08□□□□□ -0.16
CDH3-207ENST00000568292 TATP17735 454 aaPredicted RBP14.07□□□□□ -0.16
CDH3-207ENST00000568292 PTF1AQ7RTS3 328 aa14.07□□□□□ -0.16
CDH3-207ENST00000568292 ACSBG1Q96GR2 724 aa14.07□□□□□ -0.16
CDH3-207ENST00000568292 TNS2Q63HR2 1409 aa14.07□□□□□ -0.16
CDH3-207ENST00000568292 KIF20BQ96Q89 1820 aa14.06□□□□□ -0.16
CDH3-207ENST00000568292 PSDA5PKW4 1024 aaPredicted RBP14.06□□□□□ -0.16
CDH3-207ENST00000568292 KCNQ2O43526 872 aa14.06□□□□□ -0.16
CDH3-207ENST00000568292 USHBP1Q8N6Y0 703 aa14.06□□□□□ -0.16
CDH3-207ENST00000568292 NSD2O96028 1365 aa14.06□□□□□ -0.16
CDH3-207ENST00000568292 R3HDM1Q15032 1099 aaKnown RBP14.05□□□□□ -0.16
CDH3-207ENST00000568292 PEAK1Q9H792 1746 aa14.04□□□□□ -0.16
CDH3-207ENST00000568292 TNS1Q9HBL0 1735 aaKnown RBP14.04□□□□□ -0.16
CDH3-207ENST00000568292 WNK3Q9BYP7 1800 aa14.04□□□□□ -0.16
CDH3-207ENST00000568292 EYA1Q99502 592 aa14.03□□□□□ -0.16
CDH3-207ENST00000568292 FAM208AQ9UK61 1670 aaKnown RBP14.03□□□□□ -0.16
CDH3-207ENST00000568292 PER1O15534 1290 aaPredicted RBP14.02□□□□□ -0.17
CDH3-207ENST00000568292 PROM2Q8N271 834 aa14.02□□□□□ -0.17
CDH3-207ENST00000568292 PRIM1P49642 420 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms