RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 CRB1P82279 1406 aa23.88■■□□□ 1.41
KNOP1-205ENST00000568230 MYT1Q01538 1121 aa23.88■■□□□ 1.41
KNOP1-205ENST00000568230 KRT27Q7Z3Y8 459 aa23.88■■□□□ 1.41
KNOP1-205ENST00000568230 LTN1O94822 1766 aa23.88■■□□□ 1.41
KNOP1-205ENST00000568230 RGPD5Q99666 1765 aa23.87■■□□□ 1.41
KNOP1-205ENST00000568230 BARGINQ6ZT62 677 aa23.87■■□□□ 1.41
KNOP1-205ENST00000568230 AXIN2Q9Y2T1 843 aa23.86■■□□□ 1.41
KNOP1-205ENST00000568230 HSPA5P11021 654 aaKnown RBP23.85■■□□□ 1.41
KNOP1-205ENST00000568230 TCP11L2Q8N4U5 519 aa23.85■■□□□ 1.41
KNOP1-205ENST00000568230 USP35Q9P2H5 1018 aa23.84■■□□□ 1.41
KNOP1-205ENST00000568230 THRAP3Q9Y2W1 955 aaKnown RBP23.84■■□□□ 1.41
KNOP1-205ENST00000568230 WDR17Q8IZU2 1322 aa23.83■■□□□ 1.41
KNOP1-205ENST00000568230 PARP4Q9UKK3 1724 aaKnown RBP23.83■■□□□ 1.4
KNOP1-205ENST00000568230 CCDC125Q86Z20 511 aa23.83■■□□□ 1.4
KNOP1-205ENST00000568230 KIF20BQ96Q89 1820 aa23.83■■□□□ 1.4
KNOP1-205ENST00000568230 BLMP54132 1417 aaPredicted RBP23.82■■□□□ 1.4
KNOP1-205ENST00000568230 WNK3Q9BYP7 1800 aa23.81■■□□□ 1.4
KNOP1-205ENST00000568230 COG3Q96JB2 828 aa23.81■■□□□ 1.4
KNOP1-205ENST00000568230 TOM1L2Q6ZVM7 507 aa23.79■■□□□ 1.4
KNOP1-205ENST00000568230 NSD3Q9BZ95 1437 aa23.78■■□□□ 1.4
KNOP1-205ENST00000568230 FYB1O15117 783 aa23.78■■□□□ 1.4
KNOP1-205ENST00000568230 ERBB3P21860 1342 aa23.77■■□□□ 1.4
KNOP1-205ENST00000568230 CARD14Q9BXL6 1004 aa23.77■■□□□ 1.4
KNOP1-205ENST00000568230 LRRC37A3O60309 1634 aa23.77■■□□□ 1.4
KNOP1-205ENST00000568230 CARD10Q9BWT7 1032 aa23.76■■□□□ 1.39
KNOP1-205ENST00000568230 RGPD1P0DJD0 1748 aa23.74■■□□□ 1.39
KNOP1-205ENST00000568230 CSB-PGBD3P0DP91 1061 aa23.74■■□□□ 1.39
KNOP1-205ENST00000568230 GGNBP2Q9H3C7 697 aa23.74■■□□□ 1.39
KNOP1-205ENST00000568230 DISP2A7MBM2 1401 aa23.74■■□□□ 1.39
KNOP1-205ENST00000568230 FAM182BQ5T319 152 aa23.73■■□□□ 1.39
KNOP1-205ENST00000568230 CCDC7Q96M83 1385 aa23.73■■□□□ 1.39
KNOP1-205ENST00000568230 MAP3K19Q56UN5 1328 aa23.72■■□□□ 1.39
KNOP1-205ENST00000568230 FAM208AQ9UK61 1670 aaKnown RBP23.72■■□□□ 1.39
KNOP1-205ENST00000568230 TNS1Q9HBL0 1735 aaKnown RBP23.71■■□□□ 1.39
KNOP1-205ENST00000568230 PDE3BQ13370 1112 aa23.71■■□□□ 1.39
KNOP1-205ENST00000568230 IP6K1Q92551 441 aa23.71■■□□□ 1.39
KNOP1-205ENST00000568230 POLR3GLQ9BT43 218 aa23.71■■□□□ 1.39
KNOP1-205ENST00000568230 RTL1A6NKG5 1358 aa23.71■■□□□ 1.39
KNOP1-205ENST00000568230 CDCA7Q9BWT1 371 aaPredicted RBP23.7■■□□□ 1.38
KNOP1-205ENST00000568230 PEAK1Q9H792 1746 aa23.69■■□□□ 1.38
KNOP1-205ENST00000568230 FAM196AQ6ZSG2 479 aa23.69■■□□□ 1.38
KNOP1-205ENST00000568230 ANKRD24Q8TF21 1146 aa23.69■■□□□ 1.38
KNOP1-205ENST00000568230 C11orf95C9JLR9 678 aaPredicted RBP23.68■■□□□ 1.38
KNOP1-205ENST00000568230 FBLN1P23142 703 aa23.68■■□□□ 1.38
KNOP1-205ENST00000568230 SF3B2Q13435 895 aaKnown RBP23.68■■□□□ 1.38
KNOP1-205ENST00000568230 CGNL1Q0VF96 1302 aa23.68■■□□□ 1.38
KNOP1-205ENST00000568230 HOXC9P31274 260 aa23.66■■□□□ 1.38
KNOP1-205ENST00000568230 DDB1Q16531 1140 aa23.66■■□□□ 1.38
KNOP1-205ENST00000568230 ANKRD26Q9UPS8 1709 aa23.66■■□□□ 1.38
KNOP1-205ENST00000568230 RRS1Q15050 365 aaKnown RBP23.65■■□□□ 1.38
KNOP1-205ENST00000568230 DEFB132Q7Z7B7 95 aa23.65■■□□□ 1.38
KNOP1-205ENST00000568230 NLRP2Q9NX02 1062 aa23.65■■□□□ 1.38
KNOP1-205ENST00000568230 SRCAPQ6ZRS2 3230 aa23.65■■□□□ 1.38
KNOP1-205ENST00000568230 OVOS2A0A0G2JMS6 1433 aa23.65■■□□□ 1.38
KNOP1-205ENST00000568230 KIF24Q5T7B8 1368 aa23.65■■□□□ 1.38
KNOP1-205ENST00000568230 AMPHP49418 695 aa23.64■■□□□ 1.38
KNOP1-205ENST00000568230 TNS2Q63HR2 1409 aa23.64■■□□□ 1.38
KNOP1-205ENST00000568230 PANK3Q9H999 370 aa23.62■■□□□ 1.37
KNOP1-205ENST00000568230 KIF7Q2M1P5 1343 aa23.62■■□□□ 1.37
KNOP1-205ENST00000568230 BAG6P46379 1132 aa23.61■■□□□ 1.37
KNOP1-205ENST00000568230 FLT4P35916 1363 aa23.61■■□□□ 1.37
KNOP1-205ENST00000568230 BCL9O00512 1426 aa23.61■■□□□ 1.37
KNOP1-205ENST00000568230 SBF2Q86WG5 1849 aa23.6■■□□□ 1.37
KNOP1-205ENST00000568230 TRIM37O94972 964 aa23.59■■□□□ 1.37
KNOP1-205ENST00000568230 RGPD2P0DJD1 1756 aa23.59■■□□□ 1.37
KNOP1-205ENST00000568230 IL2RBP14784 551 aa23.59■■□□□ 1.37
KNOP1-205ENST00000568230 LTV1Q96GA3 475 aaPredicted RBP23.59■■□□□ 1.37
KNOP1-205ENST00000568230 NSD2O96028 1365 aa23.58■■□□□ 1.37
KNOP1-205ENST00000568230 INSRP06213 1382 aa23.58■■□□□ 1.37
KNOP1-205ENST00000568230 MARCH10Q8NA82 808 aaPredicted RBP23.58■■□□□ 1.36
KNOP1-205ENST00000568230 SMG6Q86US8 1419 aaKnown RBP23.56■■□□□ 1.36
KNOP1-205ENST00000568230 EXOC5O00471 708 aa23.56■■□□□ 1.36
KNOP1-205ENST00000568230 MAP2P11137 1827 aaKnown RBP23.55■■□□□ 1.36
KNOP1-205ENST00000568230 EN1Q05925 392 aaPredicted RBP23.55■■□□□ 1.36
KNOP1-205ENST00000568230 HSP90AB2PQ58FF8 381 aa23.55■■□□□ 1.36
KNOP1-205ENST00000568230 EMILIN1Q9Y6C2 1016 aa23.55■■□□□ 1.36
KNOP1-205ENST00000568230 PARD3Q8TEW0 1356 aa23.54■■□□□ 1.36
KNOP1-205ENST00000568230 RGPD3A6NKT7 1758 aaPredicted RBP23.51■■□□□ 1.35
KNOP1-205ENST00000568230 RGPD4Q7Z3J3 1758 aa23.51■■□□□ 1.35
KNOP1-205ENST00000568230 RREB1Q92766 1687 aa23.51■■□□□ 1.35
KNOP1-205ENST00000568230 APBA3O96018 575 aa23.51■■□□□ 1.35
KNOP1-205ENST00000568230 MEGF6O75095 1541 aa23.51■■□□□ 1.35
KNOP1-205ENST00000568230 NBPF6Q5VWK0 638 aa23.5■■□□□ 1.35
KNOP1-205ENST00000568230 NBPF4Q96M43 638 aa23.5■■□□□ 1.35
KNOP1-205ENST00000568230 CAMKK2Q96RR4 588 aa23.5■■□□□ 1.35
KNOP1-205ENST00000568230 POLKQ9UBT6 870 aa23.5■■□□□ 1.35
KNOP1-205ENST00000568230 WASHC2AQ641Q2 1341 aa23.49■■□□□ 1.35
KNOP1-205ENST00000568230 KNSTRNQ9Y448 316 aa23.49■■□□□ 1.35
KNOP1-205ENST00000568230 SHANK3Q9BYB0 1731 aa23.49■■□□□ 1.35
KNOP1-205ENST00000568230 NHSQ6T4R5 1651 aa23.48■■□□□ 1.35
KNOP1-205ENST00000568230 EZH2Q15910 746 aaKnown RBP23.48■■□□□ 1.35
KNOP1-205ENST00000568230 BCL11BQ9C0K0 894 aaPredicted RBP23.48■■□□□ 1.35
KNOP1-205ENST00000568230 NCAPD2Q15021 1401 aa23.48■■□□□ 1.35
KNOP1-205ENST00000568230 PPM1GO15355 546 aaPredicted RBP23.46■■□□□ 1.35
KNOP1-205ENST00000568230 AMER1Q5JTC6 1135 aaPredicted RBP23.46■■□□□ 1.35
KNOP1-205ENST00000568230 NUP188Q5SRE5 1749 aa23.46■■□□□ 1.35
KNOP1-205ENST00000568230 TNNT2P45379 298 aaPredicted RBP23.45■■□□□ 1.34
KNOP1-205ENST00000568230 USHBP1Q8N6Y0 703 aa23.45■■□□□ 1.34
KNOP1-205ENST00000568230 PTF1AQ7RTS3 328 aa23.44■■□□□ 1.34
KNOP1-205ENST00000568230 MORC1Q86VD1 984 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms