RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 GLI3P10071 1580 aa17.93■□□□□ 0.46
CNOT1-213ENST00000568158 USP35Q9P2H5 1018 aa17.93■□□□□ 0.46
CNOT1-213ENST00000568158 COL18A1P39060 1754 aa17.93■□□□□ 0.46
CNOT1-213ENST00000568158 NFAT5O94916 1531 aa17.93■□□□□ 0.46
CNOT1-213ENST00000568158 RGS12O14924 1447 aa17.92■□□□□ 0.46
CNOT1-213ENST00000568158 ONECUT3O60422 494 aaPredicted RBP17.92■□□□□ 0.46
CNOT1-213ENST00000568158 FAM98CQ17RN3 349 aaKnown RBP17.92■□□□□ 0.46
CNOT1-213ENST00000568158 CDK12Q9NYV4 1490 aaPredicted RBP17.92■□□□□ 0.46
CNOT1-213ENST00000568158 USP54Q70EL1 1684 aa17.92■□□□□ 0.46
CNOT1-213ENST00000568158 LMO7Q8WWI1 1683 aa17.92■□□□□ 0.46
CNOT1-213ENST00000568158 WASHC2AQ641Q2 1341 aa17.92■□□□□ 0.46
CNOT1-213ENST00000568158 RGPD5Q99666 1765 aa17.91■□□□□ 0.46
CNOT1-213ENST00000568158 SEPT12Q8IYM1 358 aa17.91■□□□□ 0.46
CNOT1-213ENST00000568158 SPATA31A1Q5TZJ5 1347 aa17.91■□□□□ 0.46
CNOT1-213ENST00000568158 CCDC7Q96M83 1385 aa17.91■□□□□ 0.46
CNOT1-213ENST00000568158 CGNL1Q0VF96 1302 aa17.9■□□□□ 0.46
CNOT1-213ENST00000568158 RRS1Q15050 365 aaKnown RBP17.89■□□□□ 0.45
CNOT1-213ENST00000568158 A0A0G2JS52 829 aa17.88■□□□□ 0.45
CNOT1-213ENST00000568158 MYT1Q01538 1121 aa17.88■□□□□ 0.45
CNOT1-213ENST00000568158 TOM1L2Q6ZVM7 507 aa17.88■□□□□ 0.45
CNOT1-213ENST00000568158 IP6K1Q92551 441 aa17.88■□□□□ 0.45
CNOT1-213ENST00000568158 MAP3K19Q56UN5 1328 aa17.88■□□□□ 0.45
CNOT1-213ENST00000568158 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
CNOT1-213ENST00000568158 KIF20BQ96Q89 1820 aa17.87■□□□□ 0.45
CNOT1-213ENST00000568158 CSB-PGBD3P0DP91 1061 aa17.87■□□□□ 0.45
CNOT1-213ENST00000568158 ZEB1P37275 1124 aaPredicted RBP17.87■□□□□ 0.45
CNOT1-213ENST00000568158 AMPHP49418 695 aa17.87■□□□□ 0.45
CNOT1-213ENST00000568158 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
CNOT1-213ENST00000568158 LTN1O94822 1766 aa17.86■□□□□ 0.45
CNOT1-213ENST00000568158 PER1O15534 1290 aaPredicted RBP17.85■□□□□ 0.45
CNOT1-213ENST00000568158 HOXC9P31274 260 aa17.85■□□□□ 0.45
CNOT1-213ENST00000568158 TNNT2P45379 298 aaPredicted RBP17.85■□□□□ 0.45
CNOT1-213ENST00000568158 WDR17Q8IZU2 1322 aa17.85■□□□□ 0.45
CNOT1-213ENST00000568158 TCP11L2Q8N4U5 519 aa17.85■□□□□ 0.45
CNOT1-213ENST00000568158 ANKRD24Q8TF21 1146 aa17.85■□□□□ 0.45
CNOT1-213ENST00000568158 LTV1Q96GA3 475 aaPredicted RBP17.85■□□□□ 0.45
CNOT1-213ENST00000568158 CRB1P82279 1406 aa17.83■□□□□ 0.45
CNOT1-213ENST00000568158 BARGINQ6ZT62 677 aa17.83■□□□□ 0.44
CNOT1-213ENST00000568158 BRWD3Q6RI45 1802 aa17.83■□□□□ 0.44
CNOT1-213ENST00000568158 KRT27Q7Z3Y8 459 aa17.82■□□□□ 0.44
CNOT1-213ENST00000568158 UPF1Q92900 1129 aaKnown RBP eCLIP17.82■□□□□ 0.44
CNOT1-213ENST00000568158 CARD10Q9BWT7 1032 aa17.82■□□□□ 0.44
CNOT1-213ENST00000568158 NLRP2Q9NX02 1062 aa17.82■□□□□ 0.44
CNOT1-213ENST00000568158 THRAP3Q9Y2W1 955 aaKnown RBP17.82■□□□□ 0.44
CNOT1-213ENST00000568158 EMILIN1Q9Y6C2 1016 aa17.82■□□□□ 0.44
CNOT1-213ENST00000568158 PPM1GO15355 546 aaPredicted RBP17.81■□□□□ 0.44
CNOT1-213ENST00000568158 CNGB1Q14028 1251 aaPredicted RBP17.81■□□□□ 0.44
CNOT1-213ENST00000568158 HSP90AB2PQ58FF8 381 aa17.81■□□□□ 0.44
CNOT1-213ENST00000568158 AMER1Q5JTC6 1135 aaPredicted RBP17.81■□□□□ 0.44
CNOT1-213ENST00000568158 FAM182BQ5T319 152 aa17.81■□□□□ 0.44
CNOT1-213ENST00000568158 MORC1Q86VD1 984 aa17.81■□□□□ 0.44
CNOT1-213ENST00000568158 ERBB3P21860 1342 aa17.8■□□□□ 0.44
CNOT1-213ENST00000568158 POLKQ9UBT6 870 aa17.8■□□□□ 0.44
CNOT1-213ENST00000568158 MAP2P11137 1827 aaKnown RBP17.79■□□□□ 0.44
CNOT1-213ENST00000568158 CC2D1BQ5T0F9 858 aaKnown RBP17.78■□□□□ 0.44
CNOT1-213ENST00000568158 ABCC6O95255 1503 aa17.77■□□□□ 0.44
CNOT1-213ENST00000568158 BLMP54132 1417 aaPredicted RBP17.77■□□□□ 0.44
CNOT1-213ENST00000568158 PDE3BQ13370 1112 aa17.76■□□□□ 0.43
CNOT1-213ENST00000568158 NSD2O96028 1365 aa17.76■□□□□ 0.43
CNOT1-213ENST00000568158 PEAK1Q9H792 1746 aa17.75■□□□□ 0.43
CNOT1-213ENST00000568158 THSD7AQ9UPZ6 1657 aa17.75■□□□□ 0.43
CNOT1-213ENST00000568158 NBPF6Q5VWK0 638 aa17.75■□□□□ 0.43
CNOT1-213ENST00000568158 NBPF4Q96M43 638 aa17.75■□□□□ 0.43
CNOT1-213ENST00000568158 ANKRD26Q9UPS8 1709 aa17.75■□□□□ 0.43
CNOT1-213ENST00000568158 RTL1A6NKG5 1358 aa17.74■□□□□ 0.43
CNOT1-213ENST00000568158 INSRP06213 1382 aa17.74■□□□□ 0.43
CNOT1-213ENST00000568158 DDB1Q16531 1140 aa17.73■□□□□ 0.43
CNOT1-213ENST00000568158 FLT4P35916 1363 aa17.73■□□□□ 0.43
CNOT1-213ENST00000568158 RGPD2P0DJD1 1756 aa17.73■□□□□ 0.43
CNOT1-213ENST00000568158 EXOC5O00471 708 aa17.72■□□□□ 0.43
CNOT1-213ENST00000568158 USHBP1Q8N6Y0 703 aa17.72■□□□□ 0.43
CNOT1-213ENST00000568158 CDCA7Q9BWT1 371 aaPredicted RBP17.72■□□□□ 0.43
CNOT1-213ENST00000568158 KIF24Q5T7B8 1368 aa17.71■□□□□ 0.43
CNOT1-213ENST00000568158 IL2RBP14784 551 aa17.71■□□□□ 0.43
CNOT1-213ENST00000568158 DDX10Q13206 875 aaKnown RBP17.7■□□□□ 0.42
CNOT1-213ENST00000568158 DISP2A7MBM2 1401 aa17.7■□□□□ 0.42
CNOT1-213ENST00000568158 MARCH10Q8NA82 808 aaPredicted RBP17.69■□□□□ 0.42
CNOT1-213ENST00000568158 MTHFSP49914 203 aa17.68■□□□□ 0.42
CNOT1-213ENST00000568158 EIF4A2Q14240 407 aaKnown RBP17.68■□□□□ 0.42
CNOT1-213ENST00000568158 FAM196AQ6ZSG2 479 aa17.68■□□□□ 0.42
CNOT1-213ENST00000568158 EYA1Q99502 592 aa17.68■□□□□ 0.42
CNOT1-213ENST00000568158 NPC1L1Q9UHC9 1359 aa17.67■□□□□ 0.42
CNOT1-213ENST00000568158 PARP4Q9UKK3 1724 aaKnown RBP17.67■□□□□ 0.42
CNOT1-213ENST00000568158 CCDC125Q86Z20 511 aa17.67■□□□□ 0.42
CNOT1-213ENST00000568158 SMG6Q86US8 1419 aaKnown RBP17.66■□□□□ 0.42
CNOT1-213ENST00000568158 TRIM37O94972 964 aa17.66■□□□□ 0.42
CNOT1-213ENST00000568158 WNK3Q9BYP7 1800 aa17.65■□□□□ 0.42
CNOT1-213ENST00000568158 DEFB132Q7Z7B7 95 aa17.64■□□□□ 0.41
CNOT1-213ENST00000568158 DDX54Q8TDD1 881 aaKnown RBP17.64■□□□□ 0.41
CNOT1-213ENST00000568158 FAM208AQ9UK61 1670 aaKnown RBP17.64■□□□□ 0.41
CNOT1-213ENST00000568158 LRRC37A3O60309 1634 aa17.63■□□□□ 0.41
CNOT1-213ENST00000568158 SF3B2Q13435 895 aaKnown RBP17.63■□□□□ 0.41
CNOT1-213ENST00000568158 RAPGEF4Q8WZA2 1011 aa17.63■□□□□ 0.41
CNOT1-213ENST00000568158 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
CNOT1-213ENST00000568158 ZCRB1Q8TBF4 217 aaKnown RBP17.62■□□□□ 0.41
CNOT1-213ENST00000568158 EP400Q96L91 3159 aa17.61■□□□□ 0.41
CNOT1-213ENST00000568158 IL13P35225 146 aa17.61■□□□□ 0.41
CNOT1-213ENST00000568158 PTF1AQ7RTS3 328 aa17.61■□□□□ 0.41
CNOT1-213ENST00000568158 MEGF6O75095 1541 aa17.6■□□□□ 0.41
CNOT1-213ENST00000568158 ZNF316A6NFI3 1004 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms