RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 CRB1P82279 1406 aa20.51■□□□□ 0.87
SMG1-213ENST00000567737 TXNRD1Q16881 649 aa20.5■□□□□ 0.87
SMG1-213ENST00000567737 SBF2Q86WG5 1849 aa20.5■□□□□ 0.87
SMG1-213ENST00000567737 ITSN1Q15811 1721 aa20.5■□□□□ 0.87
SMG1-213ENST00000567737 COL5A2P05997 1499 aaPredicted RBP20.5■□□□□ 0.87
SMG1-213ENST00000567737 CEP350Q5VT06 3117 aa20.49■□□□□ 0.87
SMG1-213ENST00000567737 MAP3K5Q99683 1374 aa20.49■□□□□ 0.87
SMG1-213ENST00000567737 ABTB2Q8N961 1025 aa20.49■□□□□ 0.87
SMG1-213ENST00000567737 NUDT16Q96DE0 195 aaKnown RBP20.49■□□□□ 0.87
SMG1-213ENST00000567737 MPHOSPH9Q99550 1183 aa20.48■□□□□ 0.87
SMG1-213ENST00000567737 LRRC37A3O60309 1634 aa20.48■□□□□ 0.87
SMG1-213ENST00000567737 ADGRB1O14514 1584 aa20.47■□□□□ 0.87
SMG1-213ENST00000567737 MYCNP04198 464 aaPredicted RBP20.47■□□□□ 0.87
SMG1-213ENST00000567737 USP19O94966 1318 aa20.46■□□□□ 0.87
SMG1-213ENST00000567737 PELP1Q8IZL8 1130 aaKnown RBP20.44■□□□□ 0.86
SMG1-213ENST00000567737 ACEP12821 1306 aa20.44■□□□□ 0.86
SMG1-213ENST00000567737 POLR3AO14802 1390 aaPredicted RBP20.44■□□□□ 0.86
SMG1-213ENST00000567737 BCL9O00512 1426 aa20.44■□□□□ 0.86
SMG1-213ENST00000567737 ZBTB7CA1YPR0 619 aa20.43■□□□□ 0.86
SMG1-213ENST00000567737 GCP02774 474 aa20.43■□□□□ 0.86
SMG1-213ENST00000567737 TOM1L2Q6ZVM7 507 aa20.43■□□□□ 0.86
SMG1-213ENST00000567737 NLRP13Q86W25 1043 aa20.43■□□□□ 0.86
SMG1-213ENST00000567737 MARCH10Q8NA82 808 aaPredicted RBP20.43■□□□□ 0.86
SMG1-213ENST00000567737 AATKQ6ZMQ8 1374 aa20.42■□□□□ 0.86
SMG1-213ENST00000567737 KLHL34Q8N239 644 aa20.41■□□□□ 0.86
SMG1-213ENST00000567737 CDCA7Q9BWT1 371 aaPredicted RBP20.41■□□□□ 0.86
SMG1-213ENST00000567737 SHANK3Q9BYB0 1731 aa20.39■□□□□ 0.86
SMG1-213ENST00000567737 CCDC61Q9Y6R9 512 aa20.39■□□□□ 0.85
SMG1-213ENST00000567737 CDK19Q9BWU1 502 aa20.38■□□□□ 0.85
SMG1-213ENST00000567737 U3KPZ7 1027 aaPredicted RBP20.38■□□□□ 0.85
SMG1-213ENST00000567737 AKAP12Q02952 1782 aa20.36■□□□□ 0.85
SMG1-213ENST00000567737 PLEKHG3A1L390 1219 aa20.36■□□□□ 0.85
SMG1-213ENST00000567737 POLD1P28340 1107 aa20.34■□□□□ 0.85
SMG1-213ENST00000567737 TOPAZ1Q8N9V7 1692 aa20.34■□□□□ 0.85
SMG1-213ENST00000567737 WDR17Q8IZU2 1322 aa20.33■□□□□ 0.85
SMG1-213ENST00000567737 WNK3Q9BYP7 1800 aa20.33■□□□□ 0.85
SMG1-213ENST00000567737 HSPA6P17066 643 aa20.33■□□□□ 0.85
SMG1-213ENST00000567737 EXOC5O00471 708 aa20.32■□□□□ 0.84
SMG1-213ENST00000567737 GRIN3BO60391 1043 aa20.31■□□□□ 0.84
SMG1-213ENST00000567737 KDM2AQ9Y2K7 1162 aa20.31■□□□□ 0.84
SMG1-213ENST00000567737 SLC16A10Q8TF71 515 aa20.3■□□□□ 0.84
SMG1-213ENST00000567737 PAPPAQ13219 1627 aa20.3■□□□□ 0.84
SMG1-213ENST00000567737 ARHGEF28Q8N1W1 1705 aaKnown RBP20.3■□□□□ 0.84
SMG1-213ENST00000567737 ATP10DQ9P241 1426 aa20.29■□□□□ 0.84
SMG1-213ENST00000567737 ZNF827Q17R98 1081 aa20.29■□□□□ 0.84
SMG1-213ENST00000567737 GPBP1L1Q9HC44 474 aaPredicted RBP20.29■□□□□ 0.84
SMG1-213ENST00000567737 CSB-PGBD3P0DP91 1061 aa20.28■□□□□ 0.84
SMG1-213ENST00000567737 NLRP6P59044 892 aa20.28■□□□□ 0.84
SMG1-213ENST00000567737 NLGN2Q8NFZ4 835 aa20.28■□□□□ 0.84
SMG1-213ENST00000567737 BRD4O60885 1362 aaPredicted RBP20.27■□□□□ 0.84
SMG1-213ENST00000567737 ACSBG1Q96GR2 724 aa20.27■□□□□ 0.84
SMG1-213ENST00000567737 CARD10Q9BWT7 1032 aa20.27■□□□□ 0.84
SMG1-213ENST00000567737 AXIN2Q9Y2T1 843 aa20.27■□□□□ 0.84
SMG1-213ENST00000567737 DCAF11Q8TEB1 546 aa20.26■□□□□ 0.83
SMG1-213ENST00000567737 SLIT3O75094 1523 aa20.26■□□□□ 0.83
SMG1-213ENST00000567737 NHSQ6T4R5 1651 aa20.26■□□□□ 0.83
SMG1-213ENST00000567737 GOLGB1Q14789 3259 aaKnown RBP20.25■□□□□ 0.83
SMG1-213ENST00000567737 RNF39Q9H2S5 420 aa20.25■□□□□ 0.83
SMG1-213ENST00000567737 YBX3P16989 372 aaKnown RBP eCLIP20.24■□□□□ 0.83
SMG1-213ENST00000567737 TNS2Q63HR2 1409 aa20.24■□□□□ 0.83
SMG1-213ENST00000567737 PPIP5K1Q6PFW1 1433 aa20.24■□□□□ 0.83
SMG1-213ENST00000567737 CPSF1Q10570 1443 aaKnown RBP20.23■□□□□ 0.83
SMG1-213ENST00000567737 COL18A1P39060 1754 aa20.23■□□□□ 0.83
SMG1-213ENST00000567737 SRPK2P78362 688 aaKnown RBP20.22■□□□□ 0.83
SMG1-213ENST00000567737 STAC3Q96MF2 364 aa20.22■□□□□ 0.83
SMG1-213ENST00000567737 CCDC7Q96M83 1385 aa20.21■□□□□ 0.83
SMG1-213ENST00000567737 USP6P35125 1406 aa20.21■□□□□ 0.83
SMG1-213ENST00000567737 AKT1S1Q96B36 256 aa20.21■□□□□ 0.83
SMG1-213ENST00000567737 LRRC4BQ9NT99 713 aa20.21■□□□□ 0.83
SMG1-213ENST00000567737 ZNF526Q8TF50 670 aaPredicted RBP20.19■□□□□ 0.82
SMG1-213ENST00000567737 PNPLA7Q6ZV29 1317 aa20.19■□□□□ 0.82
SMG1-213ENST00000567737 ARHGEF25Q86VW2 580 aa20.18■□□□□ 0.82
SMG1-213ENST00000567737 TFCP2L1Q9NZI6 479 aa20.18■□□□□ 0.82
SMG1-213ENST00000567737 COL24A1Q17RW2 1714 aa20.18■□□□□ 0.82
SMG1-213ENST00000567737 SLC27A3Q5K4L6 730 aa20.17■□□□□ 0.82
SMG1-213ENST00000567737 KCNH5Q8NCM2 988 aa20.17■□□□□ 0.82
SMG1-213ENST00000567737 ABCC6O95255 1503 aa20.17■□□□□ 0.82
SMG1-213ENST00000567737 TRPM1Q7Z4N2 1603 aa20.16■□□□□ 0.82
SMG1-213ENST00000567737 QSER1Q2KHR3 1735 aa20.16■□□□□ 0.82
SMG1-213ENST00000567737 SAMD1Q6SPF0 538 aaPredicted RBP20.16■□□□□ 0.82
SMG1-213ENST00000567737 BTAF1O14981 1849 aa20.16■□□□□ 0.82
SMG1-213ENST00000567737 ATXN8OSP0DMR3 200 aa20.15■□□□□ 0.82
SMG1-213ENST00000567737 CABP2Q9NPB3 220 aa20.15■□□□□ 0.82
SMG1-213ENST00000567737 ADCY9O60503 1353 aa20.14■□□□□ 0.81
SMG1-213ENST00000567737 SOX12O15370 315 aa20.14■□□□□ 0.81
SMG1-213ENST00000567737 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
SMG1-213ENST00000567737 APLP1P51693 650 aa20.12■□□□□ 0.81
SMG1-213ENST00000567737 RGPD5Q99666 1765 aa20.12■□□□□ 0.81
SMG1-213ENST00000567737 PIK3C2AO00443 1686 aa20.12■□□□□ 0.81
SMG1-213ENST00000567737 IL2RBP14784 551 aa20.11■□□□□ 0.81
SMG1-213ENST00000567737 NLRP2Q9NX02 1062 aa20.08■□□□□ 0.81
SMG1-213ENST00000567737 QRICH2Q9H0J4 1663 aa20.07■□□□□ 0.8
SMG1-213ENST00000567737 KIF3CO14782 793 aa20.06■□□□□ 0.8
SMG1-213ENST00000567737 CAPN15O75808 1086 aa20.06■□□□□ 0.8
SMG1-213ENST00000567737 KCNQ4P56696 695 aa20.06■□□□□ 0.8
SMG1-213ENST00000567737 CD2APQ9Y5K6 639 aa20.06■□□□□ 0.8
SMG1-213ENST00000567737 TUBGCP6Q96RT7 1819 aa20.06■□□□□ 0.8
SMG1-213ENST00000567737 CENPJQ9HC77 1338 aaPredicted RBP20.05■□□□□ 0.8
SMG1-213ENST00000567737 TTC21BQ7Z4L5 1316 aa20.04■□□□□ 0.8
SMG1-213ENST00000567737 C1QBPQ07021 282 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms