RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 MAP4K4O95819 1239 aaPredicted RBP14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 LRRFIP1Q32MZ4 808 aaKnown RBP14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 UBXN4Q92575 508 aa14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 CAMK4Q16566 473 aa14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 CAGE1Q8TC20 777 aa14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 SERPINC1P01008 464 aa14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 SSH1Q8WYL5 1049 aa14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 NFXL1Q6ZNB6 911 aa14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 SPATA32Q96LK8 384 aa14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 LRRCC1Q9C099 1032 aa14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 GDPD2Q9HCC8 539 aa14.75□□□□□ -0.05
CSPG4P13-202ENST00000567704 MARCH6O60337 910 aa14.74□□□□□ -0.05
CSPG4P13-202ENST00000567704 SLC4A2P04920 1241 aa14.74□□□□□ -0.05
CSPG4P13-202ENST00000567704 STK38Q15208 465 aa14.74□□□□□ -0.05
CSPG4P13-202ENST00000567704 MAP3K11Q16584 847 aa14.74□□□□□ -0.05
CSPG4P13-202ENST00000567704 PTPN14Q15678 1187 aa14.74□□□□□ -0.05
CSPG4P13-202ENST00000567704 C16orf45Q96MC5 204 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P13-202ENST00000567704 TSPYL1Q9H0U9 437 aa14.74□□□□□ -0.05
CSPG4P13-202ENST00000567704 KDM4AO75164 1064 aa14.73□□□□□ -0.05
CSPG4P13-202ENST00000567704 NAP1L1P55209 391 aaKnown RBP14.73□□□□□ -0.05
CSPG4P13-202ENST00000567704 CCDC183Q5T5S1 534 aa14.73□□□□□ -0.05
CSPG4P13-202ENST00000567704 ME1P48163 572 aa14.73□□□□□ -0.05
CSPG4P13-202ENST00000567704 FERMT3Q86UX7 667 aa14.73□□□□□ -0.05
CSPG4P13-202ENST00000567704 ZSCAN23Q3MJ62 389 aa14.73□□□□□ -0.05
CSPG4P13-202ENST00000567704 ADAMTS12P58397 1594 aa14.73□□□□□ -0.05
CSPG4P13-202ENST00000567704 TNNT1P13805 278 aa14.73□□□□□ -0.05
CSPG4P13-202ENST00000567704 SAFBQ15424 915 aaKnown RBP eCLIP14.73□□□□□ -0.05
CSPG4P13-202ENST00000567704 RALYLQ86SE5 291 aaKnown RBP14.73□□□□□ -0.05
CSPG4P13-202ENST00000567704 ANKRD30BQ9BXX2 1392 aa14.73□□□□□ -0.05
CSPG4P13-202ENST00000567704 ADCY5O95622 1261 aa14.72□□□□□ -0.05
CSPG4P13-202ENST00000567704 C1orf141Q5JVX7 400 aa14.72□□□□□ -0.05
CSPG4P13-202ENST00000567704 ZNF396Q96N95 335 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P13-202ENST00000567704 TMCO3Q6UWJ1 677 aa14.72□□□□□ -0.05
CSPG4P13-202ENST00000567704 BRPF1P55201 1214 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P13-202ENST00000567704 NEUROD6Q96NK8 337 aa14.72□□□□□ -0.05
CSPG4P13-202ENST00000567704 ZNF830Q96NB3 372 aaPredicted RBP14.71□□□□□ -0.05
CSPG4P13-202ENST00000567704 CALCOCO1Q9P1Z2 691 aa14.71□□□□□ -0.05
CSPG4P13-202ENST00000567704 MAP3K1Q13233 1512 aa14.71□□□□□ -0.05
CSPG4P13-202ENST00000567704 SCAPERQ9BY12 1400 aa14.71□□□□□ -0.05
CSPG4P13-202ENST00000567704 DDX58O95786 925 aaKnown RBP14.71□□□□□ -0.05
CSPG4P13-202ENST00000567704 ATP2B1P20020 1258 aa14.71□□□□□ -0.05
CSPG4P13-202ENST00000567704 PRIMPOLQ96LW4 560 aa14.71□□□□□ -0.05
CSPG4P13-202ENST00000567704 PLEKHH2Q8IVE3 1493 aa14.71□□□□□ -0.05
CSPG4P13-202ENST00000567704 CEP57L1Q8IYX8 460 aa14.7□□□□□ -0.06
CSPG4P13-202ENST00000567704 FAM69CQ0P6D2 419 aa14.7□□□□□ -0.06
CSPG4P13-202ENST00000567704 JAKMIP1Q96N16 626 aaKnown RBP14.7□□□□□ -0.06
CSPG4P13-202ENST00000567704 SMARCA5O60264 1052 aaPredicted RBP14.7□□□□□ -0.06
CSPG4P13-202ENST00000567704 OFD1O75665 1012 aa14.7□□□□□ -0.06
CSPG4P13-202ENST00000567704 TMPOP42166 694 aaKnown RBP14.7□□□□□ -0.06
CSPG4P13-202ENST00000567704 KIF18AQ8NI77 898 aa14.7□□□□□ -0.06
CSPG4P13-202ENST00000567704 PDRG1Q9NUG6 133 aa14.7□□□□□ -0.06
CSPG4P13-202ENST00000567704 CDR1P51861 262 aa14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 TBC1D9Q6ZT07 1266 aa14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 RPAP2Q8IXW5 612 aaPredicted RBP14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 IL1RAPL2Q9NP60 686 aa14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 POLR3GO15318 223 aaPredicted RBP14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 CCDC47Q96A33 483 aaKnown RBP14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 ERLIN1O75477 346 aa14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 EIF3JO75822 258 aaKnown RBP14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 AIMP1Q12904 312 aaKnown RBP14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 BBXQ8WY36 941 aaPredicted RBP14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 DEF6Q9H4E7 631 aa14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 ZKSCAN5Q9Y2L8 839 aa14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 THOC2Q8NI27 1593 aaKnown RBP14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 SEC24BO95487 1268 aa14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 WASHC4Q2M389 1173 aa14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 PCDHB15Q9Y5E8 787 aa14.69□□□□□ -0.06
CSPG4P13-202ENST00000567704 CCDC30Q5VVM6 783 aa14.68□□□□□ -0.06
CSPG4P13-202ENST00000567704 EXOC6BQ9Y2D4 811 aa14.68□□□□□ -0.06
CSPG4P13-202ENST00000567704 DHX8Q14562 1220 aaKnown RBP14.68□□□□□ -0.06
CSPG4P13-202ENST00000567704 HSP90AB3PQ58FF7 597 aa14.68□□□□□ -0.06
CSPG4P13-202ENST00000567704 CWC27Q6UX04 472 aaKnown RBP14.68□□□□□ -0.06
CSPG4P13-202ENST00000567704 TRIM27P14373 513 aa14.68□□□□□ -0.06
CSPG4P13-202ENST00000567704 TRMT1Q9NXH9 659 aaKnown RBP14.68□□□□□ -0.06
CSPG4P13-202ENST00000567704 GTF2F1P35269 517 aaKnown RBP eCLIP14.68□□□□□ -0.06
CSPG4P13-202ENST00000567704 LRSAM1Q6UWE0 723 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 CCDC83Q8IWF9 413 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 CCDC102AQ96A19 550 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 HECW1Q76N89 1606 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 ABCA5Q8WWZ7 1642 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 NOLC1Q14978 699 aaKnown RBP eCLIP14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 ANKRD1Q15327 319 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 BLOC1S2Q6QNY1 142 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 ZSCAN31Q96LW9 406 aaPredicted RBP14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 MAPKBP1O60336 1514 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 CCT4P50991 539 aaKnown RBP14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 FILIP1LQ4L180 1135 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 BMP2KLQ5H9B9 411 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 CKAP2LQ8IYA6 745 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 TARBP1Q13395 1621 aaKnown RBP14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 HCLS1P14317 486 aaPredicted RBP14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 PPP6R1Q9UPN7 881 aa14.67□□□□□ -0.06
CSPG4P13-202ENST00000567704 HIP1O00291 1037 aa14.66□□□□□ -0.06
CSPG4P13-202ENST00000567704 DNAJC2Q99543 621 aaKnown RBP14.66□□□□□ -0.06
CSPG4P13-202ENST00000567704 CLIP2Q9UDT6 1046 aa14.66□□□□□ -0.06
CSPG4P13-202ENST00000567704 KIF2AO00139 706 aaPredicted RBP14.66□□□□□ -0.06
CSPG4P13-202ENST00000567704 IGSF3O75054 1194 aa14.66□□□□□ -0.06
CSPG4P13-202ENST00000567704 SMARCE1Q969G3 411 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms