RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 CCER1Q8TC90 406 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-209ENST00000567635 ZRANB1Q9UGI0 708 aa9.7□□□□□ -0.86
SF3B3-209ENST00000567635 AXIN2Q9Y2T1 843 aa9.7□□□□□ -0.86
SF3B3-209ENST00000567635 THSD7AQ9UPZ6 1657 aa9.7□□□□□ -0.86
SF3B3-209ENST00000567635 PDE3BQ13370 1112 aa9.69□□□□□ -0.86
SF3B3-209ENST00000567635 FAM196AQ6ZSG2 479 aa9.69□□□□□ -0.86
SF3B3-209ENST00000567635 USP31Q70CQ4 1352 aa9.69□□□□□ -0.86
SF3B3-209ENST00000567635 NME9Q86XW9 330 aa9.69□□□□□ -0.86
SF3B3-209ENST00000567635 USP47Q96K76 1375 aa9.69□□□□□ -0.86
SF3B3-209ENST00000567635 CD163L1Q9NR16 1453 aa9.69□□□□□ -0.86
SF3B3-209ENST00000567635 COL5A2P05997 1499 aaPredicted RBP9.68□□□□□ -0.86
SF3B3-209ENST00000567635 EDC4Q6P2E9 1401 aaKnown RBP9.68□□□□□ -0.86
SF3B3-209ENST00000567635 NINLQ9Y2I6 1382 aa9.68□□□□□ -0.86
SF3B3-209ENST00000567635 CDCA8Q53HL2 280 aa9.68□□□□□ -0.86
SF3B3-209ENST00000567635 TOM1L2Q6ZVM7 507 aa9.68□□□□□ -0.86
SF3B3-209ENST00000567635 DEFB132Q7Z7B7 95 aa9.68□□□□□ -0.86
SF3B3-209ENST00000567635 CRB1P82279 1406 aa9.67□□□□□ -0.86
SF3B3-209ENST00000567635 KCNA4P22459 653 aa9.67□□□□□ -0.86
SF3B3-209ENST00000567635 LTN1O94822 1766 aa9.67□□□□□ -0.86
SF3B3-209ENST00000567635 USP54Q70EL1 1684 aa9.67□□□□□ -0.86
SF3B3-209ENST00000567635 A0A1W2PP64 1363 aa9.66□□□□□ -0.86
SF3B3-209ENST00000567635 WDR17Q8IZU2 1322 aa9.66□□□□□ -0.86
SF3B3-209ENST00000567635 RGPD1P0DJD0 1748 aa9.66□□□□□ -0.86
SF3B3-209ENST00000567635 CSB-PGBD3P0DP91 1061 aa9.66□□□□□ -0.86
SF3B3-209ENST00000567635 BAG6P46379 1132 aa9.66□□□□□ -0.86
SF3B3-209ENST00000567635 CARD10Q9BWT7 1032 aa9.66□□□□□ -0.86
SF3B3-209ENST00000567635 RNF216Q9NWF9 866 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-209ENST00000567635 NFAT5O94916 1531 aa9.66□□□□□ -0.86
SF3B3-209ENST00000567635 TRIM37O94972 964 aa9.65□□□□□ -0.86
SF3B3-209ENST00000567635 CDCA7Q9BWT1 371 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-209ENST00000567635 PARP4Q9UKK3 1724 aaKnown RBP9.65□□□□□ -0.87
SF3B3-209ENST00000567635 C11orf95C9JLR9 678 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-209ENST00000567635 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-209ENST00000567635 COG3Q96JB2 828 aa9.64□□□□□ -0.87
SF3B3-209ENST00000567635 ANKRD36BQ8N2N9 1353 aa9.63□□□□□ -0.87
SF3B3-209ENST00000567635 SBF2Q86WG5 1849 aa9.63□□□□□ -0.87
SF3B3-209ENST00000567635 APBA3O96018 575 aa9.63□□□□□ -0.87
SF3B3-209ENST00000567635 HOXD11P31277 338 aaPredicted RBP9.63□□□□□ -0.87
SF3B3-209ENST00000567635 DDB1Q16531 1140 aa9.63□□□□□ -0.87
SF3B3-209ENST00000567635 TNS1Q9HBL0 1735 aaKnown RBP9.62□□□□□ -0.87
SF3B3-209ENST00000567635 ABCC6O95255 1503 aa9.62□□□□□ -0.87
SF3B3-209ENST00000567635 WNK3Q9BYP7 1800 aa9.62□□□□□ -0.87
SF3B3-209ENST00000567635 EXOC5O00471 708 aa9.62□□□□□ -0.87
SF3B3-209ENST00000567635 FYB1O15117 783 aa9.62□□□□□ -0.87
SF3B3-209ENST00000567635 IP6K1Q92551 441 aa9.62□□□□□ -0.87
SF3B3-209ENST00000567635 NLRP2Q9NX02 1062 aa9.62□□□□□ -0.87
SF3B3-209ENST00000567635 EIF4G2P78344 907 aaKnown RBP eCLIP9.61□□□□□ -0.87
SF3B3-209ENST00000567635 ANKRD24Q8TF21 1146 aa9.61□□□□□ -0.87
SF3B3-209ENST00000567635 CAMKK2Q96RR4 588 aa9.61□□□□□ -0.87
SF3B3-209ENST00000567635 OVOS2A0A0J9YW53 1432 aa9.61□□□□□ -0.87
SF3B3-209ENST00000567635 OVOS2Q6IE36 1432 aa9.61□□□□□ -0.87
SF3B3-209ENST00000567635 CCDC7Q96M83 1385 aa9.61□□□□□ -0.87
SF3B3-209ENST00000567635 NPM3O75607 178 aaKnown RBP9.6□□□□□ -0.87
SF3B3-209ENST00000567635 FBLN1P23142 703 aa9.6□□□□□ -0.87
SF3B3-209ENST00000567635 AMPHP49418 695 aa9.6□□□□□ -0.87
SF3B3-209ENST00000567635 EZH2Q15910 746 aaKnown RBP9.6□□□□□ -0.87
SF3B3-209ENST00000567635 MARCH10Q8NA82 808 aaPredicted RBP9.6□□□□□ -0.87
SF3B3-209ENST00000567635 CARD14Q9BXL6 1004 aa9.6□□□□□ -0.87
SF3B3-209ENST00000567635 GGNBP2Q9H3C7 697 aa9.6□□□□□ -0.87
SF3B3-209ENST00000567635 ERBB3P21860 1342 aa9.59□□□□□ -0.87
SF3B3-209ENST00000567635 MAP3K19Q56UN5 1328 aa9.59□□□□□ -0.87
SF3B3-209ENST00000567635 MAP2P11137 1827 aaKnown RBP9.59□□□□□ -0.87
SF3B3-209ENST00000567635 KIF20BQ96Q89 1820 aa9.59□□□□□ -0.87
SF3B3-209ENST00000567635 DISP2A7MBM2 1401 aa9.59□□□□□ -0.87
SF3B3-209ENST00000567635 HSPA5P11021 654 aaKnown RBP9.59□□□□□ -0.87
SF3B3-209ENST00000567635 LTV1Q96GA3 475 aaPredicted RBP9.59□□□□□ -0.87
SF3B3-209ENST00000567635 RGPD2P0DJD1 1756 aa9.59□□□□□ -0.87
SF3B3-209ENST00000567635 LRRC37A3O60309 1634 aa9.59□□□□□ -0.87
SF3B3-209ENST00000567635 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
SF3B3-209ENST00000567635 OVOS2A0A0G2JMS6 1433 aa9.58□□□□□ -0.88
SF3B3-209ENST00000567635 IL2RBP14784 551 aa9.58□□□□□ -0.88
SF3B3-209ENST00000567635 HOXC9P31274 260 aa9.58□□□□□ -0.88
SF3B3-209ENST00000567635 POLR3GLQ9BT43 218 aa9.58□□□□□ -0.88
SF3B3-209ENST00000567635 BCL11BQ9C0K0 894 aaPredicted RBP9.58□□□□□ -0.88
SF3B3-209ENST00000567635 MYOM1P52179 1685 aa9.58□□□□□ -0.88
SF3B3-209ENST00000567635 PSDA5PKW4 1024 aaPredicted RBP9.57□□□□□ -0.88
SF3B3-209ENST00000567635 RRS1Q15050 365 aaKnown RBP9.57□□□□□ -0.88
SF3B3-209ENST00000567635 PARD3Q8TEW0 1356 aa9.57□□□□□ -0.88
SF3B3-209ENST00000567635 FAM208AQ9UK61 1670 aaKnown RBP9.57□□□□□ -0.88
SF3B3-209ENST00000567635 PLSCR1O15162 318 aa9.56□□□□□ -0.88
SF3B3-209ENST00000567635 NBPF14Q5TI25 921 aa9.56□□□□□ -0.88
SF3B3-209ENST00000567635 BCL9O00512 1426 aa9.56□□□□□ -0.88
SF3B3-209ENST00000567635 R3HDM1Q15032 1099 aaKnown RBP9.55□□□□□ -0.88
SF3B3-209ENST00000567635 PTF1AQ7RTS3 328 aa9.55□□□□□ -0.88
SF3B3-209ENST00000567635 NSD3Q9BZ95 1437 aa9.55□□□□□ -0.88
SF3B3-209ENST00000567635 CGNL1Q0VF96 1302 aa9.55□□□□□ -0.88
SF3B3-209ENST00000567635 RREB1Q92766 1687 aa9.54□□□□□ -0.88
SF3B3-209ENST00000567635 RTL1A6NKG5 1358 aa9.53□□□□□ -0.88
SF3B3-209ENST00000567635 KCNQ2O43526 872 aa9.53□□□□□ -0.88
SF3B3-209ENST00000567635 HSP90AB2PQ58FF8 381 aa9.53□□□□□ -0.88
SF3B3-209ENST00000567635 NBPF6Q5VWK0 638 aa9.53□□□□□ -0.88
SF3B3-209ENST00000567635 DDX54Q8TDD1 881 aaKnown RBP9.53□□□□□ -0.88
SF3B3-209ENST00000567635 NBPF4Q96M43 638 aa9.53□□□□□ -0.88
SF3B3-209ENST00000567635 PANK3Q9H999 370 aa9.53□□□□□ -0.88
SF3B3-209ENST00000567635 TNS2Q63HR2 1409 aa9.53□□□□□ -0.88
SF3B3-209ENST00000567635 NUP188Q5SRE5 1749 aa9.53□□□□□ -0.88
SF3B3-209ENST00000567635 RGPD3A6NKT7 1758 aaPredicted RBP9.52□□□□□ -0.88
SF3B3-209ENST00000567635 RGPD4Q7Z3J3 1758 aa9.52□□□□□ -0.88
SF3B3-209ENST00000567635 INSRP06213 1382 aa9.52□□□□□ -0.88
SF3B3-209ENST00000567635 KIF24Q5T7B8 1368 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms