RNA–Protein interactions for RNA: ENST00000566523.1

CCP110-208, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-208ENST00000566523 CDV3Q9UKY7 258 aaKnown RBP13.55□□□□□ -0.24
CCP110-208ENST00000566523 SLC10A4Q96EP9 437 aa13.54□□□□□ -0.24
CCP110-208ENST00000566523 ZFP42Q96MM3 310 aa13.54□□□□□ -0.24
CCP110-208ENST00000566523 CCDC116Q8IYX3 515 aa13.53□□□□□ -0.24
CCP110-208ENST00000566523 KCTD15Q96SI1 283 aaPredicted RBP13.53□□□□□ -0.24
CCP110-208ENST00000566523 LCE2AQ5TA79 106 aaPredicted RBP13.51□□□□□ -0.25
CCP110-208ENST00000566523 EMILIN1Q9Y6C2 1016 aa13.51□□□□□ -0.25
CCP110-208ENST00000566523 SOCS7O14512 581 aa13.5□□□□□ -0.25
CCP110-208ENST00000566523 TREML4Q6UXN2 200 aa13.5□□□□□ -0.25
CCP110-208ENST00000566523 SCARF1Q14162 830 aa13.48□□□□□ -0.25
CCP110-208ENST00000566523 PPP1R26Q5T8A7 1209 aaPredicted RBP13.48□□□□□ -0.25
CCP110-208ENST00000566523 MEIOBQ8N635 442 aa13.48□□□□□ -0.25
CCP110-208ENST00000566523 MTMR14Q8NCE2 650 aa13.48□□□□□ -0.25
CCP110-208ENST00000566523 PURBQ96QR8 312 aaKnown RBP13.48□□□□□ -0.25
CCP110-208ENST00000566523 NFX1Q12986 1120 aaKnown RBP13.46□□□□□ -0.25
CCP110-208ENST00000566523 INTS6LQ5JSJ4 861 aaKnown RBP13.46□□□□□ -0.25
CCP110-208ENST00000566523 SNRKQ9NRH2 765 aa13.46□□□□□ -0.25
CCP110-208ENST00000566523 ZBBXA8MT70 800 aa13.45□□□□□ -0.26
CCP110-208ENST00000566523 GPR37L1O60883 481 aa13.44□□□□□ -0.26
CCP110-208ENST00000566523 DZIP3Q86Y13 1208 aaKnown RBP13.44□□□□□ -0.26
CCP110-208ENST00000566523 PGPEP1Q9NXJ5 209 aa13.44□□□□□ -0.26
CCP110-208ENST00000566523 DHX9Q08211 1270 aaKnown RBP13.43□□□□□ -0.26
CCP110-208ENST00000566523 NBPF20Q3BBV1 942 aa13.43□□□□□ -0.26
CCP110-208ENST00000566523 LINC00528Q8N1L1 170 aa13.43□□□□□ -0.26
CCP110-208ENST00000566523 TERTO14746 1132 aaKnown RBP13.42□□□□□ -0.26
CCP110-208ENST00000566523 FBXO45P0C2W1 286 aa13.42□□□□□ -0.26
CCP110-208ENST00000566523 Q6ZVU0 165 aa13.42□□□□□ -0.26
CCP110-208ENST00000566523 ESPNB1AK53 854 aa13.41□□□□□ -0.26
CCP110-208ENST00000566523 WFS1O76024 890 aa13.41□□□□□ -0.26
CCP110-208ENST00000566523 C6orf118Q5T5N4 469 aa13.41□□□□□ -0.26
CCP110-208ENST00000566523 NDUFB9Q9Y6M9 179 aa13.4□□□□□ -0.26
CCP110-208ENST00000566523 UPP2O95045 317 aa13.39□□□□□ -0.27
CCP110-208ENST00000566523 CBLBQ13191 982 aa13.39□□□□□ -0.27
CCP110-208ENST00000566523 TSEN34Q9BSV6 310 aaKnown RBP13.39□□□□□ -0.27
CCP110-208ENST00000566523 BMP2P12643 396 aa13.38□□□□□ -0.27
CCP110-208ENST00000566523 LCE2CQ5TA81 110 aa13.37□□□□□ -0.27
CCP110-208ENST00000566523 TMPRSS4Q9NRS4 437 aa13.37□□□□□ -0.27
CCP110-208ENST00000566523 NXF1Q9UBU9 619 aaKnown RBP13.37□□□□□ -0.27
CCP110-208ENST00000566523 SOBPA7XYQ1 873 aa13.36□□□□□ -0.27
CCP110-208ENST00000566523 APBB1O00213 710 aa13.36□□□□□ -0.27
CCP110-208ENST00000566523 NR1H3Q13133 447 aa13.36□□□□□ -0.27
CCP110-208ENST00000566523 ERVH48-1M5A8F1 160 aa13.35□□□□□ -0.27
CCP110-208ENST00000566523 PCDHB9Q9Y5E1 797 aa13.35□□□□□ -0.27
CCP110-208ENST00000566523 SOS2Q07890 1332 aaPredicted RBP13.35□□□□□ -0.27
CCP110-208ENST00000566523 RAB15P59190 212 aa13.34□□□□□ -0.27
CCP110-208ENST00000566523 SEPT12Q8IYM1 358 aa13.34□□□□□ -0.27
CCP110-208ENST00000566523 NPAS3Q8IXF0 933 aa13.33□□□□□ -0.28
CCP110-208ENST00000566523 ZNF784Q8NCA9 323 aaPredicted RBP13.33□□□□□ -0.28
CCP110-208ENST00000566523 LILRA1O75019 489 aa13.32□□□□□ -0.28
CCP110-208ENST00000566523 GIGYF1O75420 1035 aaPredicted RBP13.32□□□□□ -0.28
CCP110-208ENST00000566523 MAN1A2O60476 641 aa13.31□□□□□ -0.28
CCP110-208ENST00000566523 SPINT1O43278 529 aa13.3□□□□□ -0.28
CCP110-208ENST00000566523 MCCD1P59942 119 aaPredicted RBP13.3□□□□□ -0.28
CCP110-208ENST00000566523 AGBL1Q96MI9 1066 aa13.3□□□□□ -0.28
CCP110-208ENST00000566523 DNMT3LQ9UJW3 386 aa13.3□□□□□ -0.28
CCP110-208ENST00000566523 H3BM21 787 aa13.29□□□□□ -0.28
CCP110-208ENST00000566523 ADD1P35611 737 aaKnown RBP13.29□□□□□ -0.28
CCP110-208ENST00000566523 TBC1D2BQ9UPU7 963 aa13.29□□□□□ -0.28
CCP110-208ENST00000566523 SLC16A10Q8TF71 515 aa13.28□□□□□ -0.28
CCP110-208ENST00000566523 VEGFBP49765 207 aa13.27□□□□□ -0.29
CCP110-208ENST00000566523 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.29
CCP110-208ENST00000566523 TTLL8A6PVC2 850 aa13.26□□□□□ -0.29
CCP110-208ENST00000566523 WIPF1O43516 503 aa13.26□□□□□ -0.29
CCP110-208ENST00000566523 KDF1Q8NAX2 398 aaPredicted RBP13.26□□□□□ -0.29
CCP110-208ENST00000566523 ADH1AP07327 375 aa13.25□□□□□ -0.29
CCP110-208ENST00000566523 RELBQ01201 579 aa13.25□□□□□ -0.29
CCP110-208ENST00000566523 CCDC125Q86Z20 511 aa13.25□□□□□ -0.29
CCP110-208ENST00000566523 ZNF592Q92610 1267 aa13.25□□□□□ -0.29
CCP110-208ENST00000566523 IRF5Q13568 498 aa13.24□□□□□ -0.29
CCP110-208ENST00000566523 CYLDQ9NQC7 956 aa13.24□□□□□ -0.29
CCP110-208ENST00000566523 PRM3Q9NNZ6 103 aa13.23□□□□□ -0.29
CCP110-208ENST00000566523 CTSOP43234 321 aaPredicted RBP13.22□□□□□ -0.29
CCP110-208ENST00000566523 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.22□□□□□ -0.29
CCP110-208ENST00000566523 RNF20Q5VTR2 975 aa13.22□□□□□ -0.29
CCP110-208ENST00000566523 ZNF395Q9H8N7 513 aaPredicted RBP13.22□□□□□ -0.29
CCP110-208ENST00000566523 FIGNL2A6NMB9 653 aa13.21□□□□□ -0.29
CCP110-208ENST00000566523 PTGIRP43119 386 aa13.21□□□□□ -0.29
CCP110-208ENST00000566523 IRF7Q92985 503 aa13.21□□□□□ -0.29
CCP110-208ENST00000566523 INSM2Q96T92 566 aaPredicted RBP13.21□□□□□ -0.29
CCP110-208ENST00000566523 ERBB4Q15303 1308 aa13.2□□□□□ -0.3
CCP110-208ENST00000566523 MCM6Q14566 821 aa13.2□□□□□ -0.3
CCP110-208ENST00000566523 TRIM52Q96A61 297 aa13.2□□□□□ -0.3
CCP110-208ENST00000566523 ERVK-9P63128 1117 aa13.19□□□□□ -0.3
CCP110-208ENST00000566523 PPFIA3O75145 1194 aa13.18□□□□□ -0.3
CCP110-208ENST00000566523 GDPD2Q9HCC8 539 aa13.18□□□□□ -0.3
CCP110-208ENST00000566523 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
CCP110-208ENST00000566523 VSIG8P0DPA2 414 aa13.16□□□□□ -0.3
CCP110-208ENST00000566523 GMPRP36959 345 aa13.16□□□□□ -0.3
CCP110-208ENST00000566523 PTSQ03393 145 aa13.16□□□□□ -0.3
CCP110-208ENST00000566523 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
CCP110-208ENST00000566523 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
CCP110-208ENST00000566523 POLMQ9NP87 494 aaPredicted RBP13.16□□□□□ -0.3
CCP110-208ENST00000566523 FOXD4L5Q5VV16 416 aaPredicted RBP13.15□□□□□ -0.3
CCP110-208ENST00000566523 PCDHB11Q9Y5F2 797 aa13.15□□□□□ -0.3
CCP110-208ENST00000566523 SCTRP47872 440 aa13.14□□□□□ -0.31
CCP110-208ENST00000566523 ATP5J2-PTCD1G3V325 749 aa13.13□□□□□ -0.31
CCP110-208ENST00000566523 ABL2P42684 1182 aa13.13□□□□□ -0.31
CCP110-208ENST00000566523 EIF4G2P78344 907 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCP110-208ENST00000566523 VAC14Q08AM6 782 aa13.12□□□□□ -0.31
CCP110-208ENST00000566523 PHTF2Q8N3S3 785 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms