RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 ANO8Q9HCE9 1232 aaPredicted RBP29.18■■■□□ 2.26
PDXDC1-213ENST00000566426 MARCH10Q8NA82 808 aaPredicted RBP29.16■■■□□ 2.26
PDXDC1-213ENST00000566426 KCNH5Q8NCM2 988 aa29.16■■■□□ 2.26
PDXDC1-213ENST00000566426 AXIN2Q9Y2T1 843 aa29.16■■■□□ 2.26
PDXDC1-213ENST00000566426 BCL9O00512 1426 aa29.16■■■□□ 2.26
PDXDC1-213ENST00000566426 EVC2Q86UK5 1308 aa29.15■■■□□ 2.26
PDXDC1-213ENST00000566426 PTF1AQ7RTS3 328 aa29.14■■■□□ 2.26
PDXDC1-213ENST00000566426 PROM2Q8N271 834 aa29.14■■■□□ 2.26
PDXDC1-213ENST00000566426 ZNF692Q9BU19 519 aaPredicted RBP29.14■■■□□ 2.26
PDXDC1-213ENST00000566426 QRICH2Q9H0J4 1663 aa29.13■■■□□ 2.25
PDXDC1-213ENST00000566426 CSB-PGBD3P0DP91 1061 aa29.13■■■□□ 2.25
PDXDC1-213ENST00000566426 ARHGEF25Q86VW2 580 aa29.13■■■□□ 2.25
PDXDC1-213ENST00000566426 CARD10Q9BWT7 1032 aa29.13■■■□□ 2.25
PDXDC1-213ENST00000566426 CPSF1Q10570 1443 aaKnown RBP29.12■■■□□ 2.25
PDXDC1-213ENST00000566426 COL18A1P39060 1754 aa29.12■■■□□ 2.25
PDXDC1-213ENST00000566426 ZBTB7AO95365 584 aa29.12■■■□□ 2.25
PDXDC1-213ENST00000566426 STK32BQ9NY57 414 aa29.12■■■□□ 2.25
PDXDC1-213ENST00000566426 EXOC5O00471 708 aa29.11■■■□□ 2.25
PDXDC1-213ENST00000566426 CASZ1Q86V15 1759 aa29.11■■■□□ 2.25
PDXDC1-213ENST00000566426 TXNRD1Q16881 649 aa29.09■■■□□ 2.25
PDXDC1-213ENST00000566426 PDGFDQ9GZP0 370 aaPredicted RBP29.09■■■□□ 2.25
PDXDC1-213ENST00000566426 PIK3C2AO00443 1686 aa29.09■■■□□ 2.25
PDXDC1-213ENST00000566426 TTC21BQ7Z4L5 1316 aa29.08■■■□□ 2.25
PDXDC1-213ENST00000566426 AKAP12Q02952 1782 aa29.08■■■□□ 2.25
PDXDC1-213ENST00000566426 PTGER2P43116 358 aa29.07■■■□□ 2.24
PDXDC1-213ENST00000566426 TTC21AQ8NDW8 1320 aa29.07■■■□□ 2.24
PDXDC1-213ENST00000566426 WNK3Q9BYP7 1800 aa29.07■■■□□ 2.24
PDXDC1-213ENST00000566426 ATF5Q9Y2D1 282 aaPredicted RBP29.07■■■□□ 2.24
PDXDC1-213ENST00000566426 SOX12O15370 315 aa29.06■■■□□ 2.24
PDXDC1-213ENST00000566426 SLC15A2Q16348 729 aa29.06■■■□□ 2.24
PDXDC1-213ENST00000566426 CCDC7Q96M83 1385 aa29.04■■■□□ 2.24
PDXDC1-213ENST00000566426 MTFR1LQ9H019 292 aa29.02■■■□□ 2.24
PDXDC1-213ENST00000566426 TRPM1Q7Z4N2 1603 aa29.01■■■□□ 2.23
PDXDC1-213ENST00000566426 SYT17Q9BSW7 474 aa29■■■□□ 2.23
PDXDC1-213ENST00000566426 RGPD5Q99666 1765 aa28.99■■■□□ 2.23
PDXDC1-213ENST00000566426 FHDC1Q9C0D6 1143 aaPredicted RBP28.99■■■□□ 2.23
PDXDC1-213ENST00000566426 MYOM1P52179 1685 aa28.99■■■□□ 2.23
PDXDC1-213ENST00000566426 L3MBTL2Q969R5 705 aa28.98■■■□□ 2.23
PDXDC1-213ENST00000566426 ZNF784Q8NCA9 323 aaPredicted RBP28.97■■■□□ 2.23
PDXDC1-213ENST00000566426 TNS2Q63HR2 1409 aa28.96■■■□□ 2.23
PDXDC1-213ENST00000566426 KTN1Q86UP2 1357 aaKnown RBP28.96■■■□□ 2.23
PDXDC1-213ENST00000566426 ABCC6O95255 1503 aa28.95■■■□□ 2.23
PDXDC1-213ENST00000566426 NFAT5O94916 1531 aa28.94■■■□□ 2.22
PDXDC1-213ENST00000566426 ROCK2O75116 1388 aaKnown RBP28.92■■■□□ 2.22
PDXDC1-213ENST00000566426 ACSBG1Q96GR2 724 aa28.92■■■□□ 2.22
PDXDC1-213ENST00000566426 SGIP1Q9BQI5 828 aa28.92■■■□□ 2.22
PDXDC1-213ENST00000566426 NLRP2Q9NX02 1062 aa28.91■■■□□ 2.22
PDXDC1-213ENST00000566426 IL2RBP14784 551 aa28.9■■■□□ 2.22
PDXDC1-213ENST00000566426 ARXQ96QS3 562 aa28.9■■■□□ 2.22
PDXDC1-213ENST00000566426 UTRNP46939 3433 aa28.9■■■□□ 2.22
PDXDC1-213ENST00000566426 NHSQ6T4R5 1651 aa28.89■■■□□ 2.21
PDXDC1-213ENST00000566426 ERBB3P21860 1342 aa28.89■■■□□ 2.21
PDXDC1-213ENST00000566426 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.88■■■□□ 2.21
PDXDC1-213ENST00000566426 USP31Q70CQ4 1352 aa28.87■■■□□ 2.21
PDXDC1-213ENST00000566426 CHD4Q14839 1912 aa28.84■■■□□ 2.21
PDXDC1-213ENST00000566426 MAP3K5Q99683 1374 aa28.84■■■□□ 2.21
PDXDC1-213ENST00000566426 ANKRD24Q8TF21 1146 aa28.82■■■□□ 2.2
PDXDC1-213ENST00000566426 KAT6BQ8WYB5 2073 aa28.81■■■□□ 2.2
PDXDC1-213ENST00000566426 MON2Q7Z3U7 1717 aa28.8■■■□□ 2.2
PDXDC1-213ENST00000566426 NME9Q86XW9 330 aa28.8■■■□□ 2.2
PDXDC1-213ENST00000566426 HDGFL2Q7Z4V5 671 aaPredicted RBP28.79■■■□□ 2.2
PDXDC1-213ENST00000566426 SLC16A10Q8TF71 515 aa28.79■■■□□ 2.2
PDXDC1-213ENST00000566426 SIN3AQ96ST3 1273 aa28.79■■■□□ 2.2
PDXDC1-213ENST00000566426 PAPPAQ13219 1627 aa28.79■■■□□ 2.2
PDXDC1-213ENST00000566426 SBNO2Q9Y2G9 1366 aa28.78■■■□□ 2.2
PDXDC1-213ENST00000566426 GPR162Q16538 588 aa28.78■■■□□ 2.2
PDXDC1-213ENST00000566426 ZNF827Q17R98 1081 aa28.78■■■□□ 2.2
PDXDC1-213ENST00000566426 TMC1Q8TDI8 760 aa28.78■■■□□ 2.2
PDXDC1-213ENST00000566426 BTAF1O14981 1849 aa28.78■■■□□ 2.2
PDXDC1-213ENST00000566426 C1QTNF8P60827 252 aa28.77■■■□□ 2.2
PDXDC1-213ENST00000566426 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
PDXDC1-213ENST00000566426 SLC27A3Q5K4L6 730 aa28.77■■■□□ 2.2
PDXDC1-213ENST00000566426 LRRC4BQ9NT99 713 aa28.77■■■□□ 2.2
PDXDC1-213ENST00000566426 SENP3-EIF4A1A0A087X0R7 540 aa28.76■■■□□ 2.19
PDXDC1-213ENST00000566426 POLD1P28340 1107 aa28.76■■■□□ 2.19
PDXDC1-213ENST00000566426 USP54Q70EL1 1684 aa28.76■■■□□ 2.19
PDXDC1-213ENST00000566426 AKT1S1Q96B36 256 aa28.74■■■□□ 2.19
PDXDC1-213ENST00000566426 LTN1O94822 1766 aa28.74■■■□□ 2.19
PDXDC1-213ENST00000566426 DDX54Q8TDD1 881 aaKnown RBP28.73■■■□□ 2.19
PDXDC1-213ENST00000566426 TERF2IPQ9NYB0 399 aa28.72■■■□□ 2.19
PDXDC1-213ENST00000566426 CD163L1Q9NR16 1453 aa28.72■■■□□ 2.19
PDXDC1-213ENST00000566426 EDC4Q6P2E9 1401 aaKnown RBP28.71■■■□□ 2.19
PDXDC1-213ENST00000566426 KLHL34Q8N239 644 aa28.71■■■□□ 2.19
PDXDC1-213ENST00000566426 IP6K1Q92551 441 aa28.7■■■□□ 2.18
PDXDC1-213ENST00000566426 SLC12A5Q9H2X9 1139 aa28.7■■■□□ 2.18
PDXDC1-213ENST00000566426 TFCP2L1Q9NZI6 479 aa28.69■■■□□ 2.18
PDXDC1-213ENST00000566426 CARD11Q9BXL7 1154 aa28.68■■■□□ 2.18
PDXDC1-213ENST00000566426 SYTL4Q96C24 671 aaPredicted RBP28.66■■■□□ 2.18
PDXDC1-213ENST00000566426 PNPLA7Q6ZV29 1317 aa28.66■■■□□ 2.18
PDXDC1-213ENST00000566426 PELP1Q8IZL8 1130 aaKnown RBP28.65■■■□□ 2.18
PDXDC1-213ENST00000566426 LTV1Q96GA3 475 aaPredicted RBP28.65■■■□□ 2.18
PDXDC1-213ENST00000566426 QSER1Q2KHR3 1735 aa28.65■■■□□ 2.18
PDXDC1-213ENST00000566426 PUS7Q96PZ0 661 aaKnown RBP28.64■■■□□ 2.18
PDXDC1-213ENST00000566426 GIGYF1O75420 1035 aaPredicted RBP28.63■■■□□ 2.17
PDXDC1-213ENST00000566426 PRIM1P49642 420 aaKnown RBP28.63■■■□□ 2.17
PDXDC1-213ENST00000566426 A0A1W2PP64 1363 aa28.62■■■□□ 2.17
PDXDC1-213ENST00000566426 ANKRD36BQ8N2N9 1353 aa28.62■■■□□ 2.17
PDXDC1-213ENST00000566426 FAM208AQ9UK61 1670 aaKnown RBP28.61■■■□□ 2.17
PDXDC1-213ENST00000566426 KCNQ4P56696 695 aa28.58■■■□□ 2.17
PDXDC1-213ENST00000566426 ZCRB1Q8TBF4 217 aaKnown RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms