RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 MYOM1P52179 1685 aa30.14■■■□□ 2.41
SPG7-214ENST00000566371 SOX12O15370 315 aa30.13■■■□□ 2.41
SPG7-214ENST00000566371 BARGINQ6ZT62 677 aa30.13■■■□□ 2.41
SPG7-214ENST00000566371 CCDC125Q86Z20 511 aa30.13■■■□□ 2.41
SPG7-214ENST00000566371 CRB1P82279 1406 aa30.13■■■□□ 2.41
SPG7-214ENST00000566371 THRAP3Q9Y2W1 955 aaKnown RBP30.11■■■□□ 2.41
SPG7-214ENST00000566371 TCP11L2Q8N4U5 519 aa30.1■■■□□ 2.41
SPG7-214ENST00000566371 USP35Q9P2H5 1018 aa30.1■■■□□ 2.41
SPG7-214ENST00000566371 AXIN2Q9Y2T1 843 aa30.1■■■□□ 2.41
SPG7-214ENST00000566371 LTN1O94822 1766 aa30.08■■■□□ 2.41
SPG7-214ENST00000566371 WDR17Q8IZU2 1322 aa30.07■■■□□ 2.4
SPG7-214ENST00000566371 HSPA5P11021 654 aaKnown RBP30.07■■■□□ 2.4
SPG7-214ENST00000566371 RGPD5Q99666 1765 aa30.07■■■□□ 2.4
SPG7-214ENST00000566371 BLMP54132 1417 aaPredicted RBP30.06■■■□□ 2.4
SPG7-214ENST00000566371 COG3Q96JB2 828 aa30.04■■■□□ 2.4
SPG7-214ENST00000566371 PARP4Q9UKK3 1724 aaKnown RBP30.02■■■□□ 2.4
SPG7-214ENST00000566371 TOM1L2Q6ZVM7 507 aa30.02■■■□□ 2.4
SPG7-214ENST00000566371 KIF20BQ96Q89 1820 aa30.01■■■□□ 2.39
SPG7-214ENST00000566371 FYB1O15117 783 aa29.99■■■□□ 2.39
SPG7-214ENST00000566371 WNK3Q9BYP7 1800 aa29.98■■■□□ 2.39
SPG7-214ENST00000566371 CSB-PGBD3P0DP91 1061 aa29.97■■■□□ 2.39
SPG7-214ENST00000566371 CARD10Q9BWT7 1032 aa29.97■■■□□ 2.39
SPG7-214ENST00000566371 CARD14Q9BXL6 1004 aa29.97■■■□□ 2.39
SPG7-214ENST00000566371 NSD3Q9BZ95 1437 aa29.96■■■□□ 2.39
SPG7-214ENST00000566371 ERBB3P21860 1342 aa29.96■■■□□ 2.39
SPG7-214ENST00000566371 PDE3BQ13370 1112 aa29.95■■■□□ 2.39
SPG7-214ENST00000566371 SF3B2Q13435 895 aaKnown RBP29.94■■■□□ 2.38
SPG7-214ENST00000566371 CDCA7Q9BWT1 371 aaPredicted RBP29.94■■■□□ 2.38
SPG7-214ENST00000566371 RGPD1P0DJD0 1748 aa29.93■■■□□ 2.38
SPG7-214ENST00000566371 LRRC37A3O60309 1634 aa29.93■■■□□ 2.38
SPG7-214ENST00000566371 CCDC7Q96M83 1385 aa29.93■■■□□ 2.38
SPG7-214ENST00000566371 GGNBP2Q9H3C7 697 aa29.93■■■□□ 2.38
SPG7-214ENST00000566371 FAM182BQ5T319 152 aa29.92■■■□□ 2.38
SPG7-214ENST00000566371 FAM196AQ6ZSG2 479 aa29.92■■■□□ 2.38
SPG7-214ENST00000566371 IP6K1Q92551 441 aa29.92■■■□□ 2.38
SPG7-214ENST00000566371 POLR3GLQ9BT43 218 aa29.91■■■□□ 2.38
SPG7-214ENST00000566371 MAP3K19Q56UN5 1328 aa29.91■■■□□ 2.38
SPG7-214ENST00000566371 DISP2A7MBM2 1401 aa29.89■■■□□ 2.38
SPG7-214ENST00000566371 FAM208AQ9UK61 1670 aaKnown RBP29.89■■■□□ 2.38
SPG7-214ENST00000566371 ANKRD24Q8TF21 1146 aa29.89■■■□□ 2.38
SPG7-214ENST00000566371 RTL1A6NKG5 1358 aa29.89■■■□□ 2.37
SPG7-214ENST00000566371 CGNL1Q0VF96 1302 aa29.87■■■□□ 2.37
SPG7-214ENST00000566371 TNS1Q9HBL0 1735 aaKnown RBP29.86■■■□□ 2.37
SPG7-214ENST00000566371 C11orf95C9JLR9 678 aaPredicted RBP29.86■■■□□ 2.37
SPG7-214ENST00000566371 DDB1Q16531 1140 aa29.86■■■□□ 2.37
SPG7-214ENST00000566371 HOXC9P31274 260 aa29.85■■■□□ 2.37
SPG7-214ENST00000566371 AMPHP49418 695 aa29.85■■■□□ 2.37
SPG7-214ENST00000566371 NLRP2Q9NX02 1062 aa29.85■■■□□ 2.37
SPG7-214ENST00000566371 FBLN1P23142 703 aa29.84■■■□□ 2.37
SPG7-214ENST00000566371 PEAK1Q9H792 1746 aa29.84■■■□□ 2.37
SPG7-214ENST00000566371 DEFB132Q7Z7B7 95 aa29.83■■■□□ 2.37
SPG7-214ENST00000566371 OVOS2A0A0G2JMS6 1433 aa29.82■■■□□ 2.36
SPG7-214ENST00000566371 KIF24Q5T7B8 1368 aa29.82■■■□□ 2.36
SPG7-214ENST00000566371 BAG6P46379 1132 aa29.82■■■□□ 2.36
SPG7-214ENST00000566371 RRS1Q15050 365 aaKnown RBP29.81■■■□□ 2.36
SPG7-214ENST00000566371 PANK3Q9H999 370 aa29.79■■■□□ 2.36
SPG7-214ENST00000566371 ANKRD26Q9UPS8 1709 aa29.79■■■□□ 2.36
SPG7-214ENST00000566371 TRIM37O94972 964 aa29.78■■■□□ 2.36
SPG7-214ENST00000566371 TNS2Q63HR2 1409 aa29.78■■■□□ 2.36
SPG7-214ENST00000566371 BCL9O00512 1426 aa29.77■■■□□ 2.36
SPG7-214ENST00000566371 FLT4P35916 1363 aa29.77■■■□□ 2.36
SPG7-214ENST00000566371 KIF7Q2M1P5 1343 aa29.76■■■□□ 2.36
SPG7-214ENST00000566371 EXOC5O00471 708 aa29.76■■■□□ 2.35
SPG7-214ENST00000566371 IL2RBP14784 551 aa29.76■■■□□ 2.35
SPG7-214ENST00000566371 LTV1Q96GA3 475 aaPredicted RBP29.76■■■□□ 2.35
SPG7-214ENST00000566371 SMG6Q86US8 1419 aaKnown RBP29.74■■■□□ 2.35
SPG7-214ENST00000566371 MARCH10Q8NA82 808 aaPredicted RBP29.74■■■□□ 2.35
SPG7-214ENST00000566371 INSRP06213 1382 aa29.74■■■□□ 2.35
SPG7-214ENST00000566371 NSD2O96028 1365 aa29.73■■■□□ 2.35
SPG7-214ENST00000566371 SBF2Q86WG5 1849 aa29.72■■■□□ 2.35
SPG7-214ENST00000566371 PARD3Q8TEW0 1356 aa29.7■■■□□ 2.35
SPG7-214ENST00000566371 EN1Q05925 392 aaPredicted RBP29.7■■■□□ 2.35
SPG7-214ENST00000566371 RGPD2P0DJD1 1756 aa29.69■■■□□ 2.34
SPG7-214ENST00000566371 APBA3O96018 575 aa29.68■■■□□ 2.34
SPG7-214ENST00000566371 HSP90AB2PQ58FF8 381 aa29.68■■■□□ 2.34
SPG7-214ENST00000566371 EMILIN1Q9Y6C2 1016 aa29.68■■■□□ 2.34
SPG7-214ENST00000566371 MAP2P11137 1827 aaKnown RBP29.67■■■□□ 2.34
SPG7-214ENST00000566371 CAMKK2Q96RR4 588 aa29.66■■■□□ 2.34
SPG7-214ENST00000566371 KNSTRNQ9Y448 316 aa29.65■■■□□ 2.34
SPG7-214ENST00000566371 NBPF6Q5VWK0 638 aa29.64■■■□□ 2.34
SPG7-214ENST00000566371 NBPF4Q96M43 638 aa29.64■■■□□ 2.34
SPG7-214ENST00000566371 BCL11BQ9C0K0 894 aaPredicted RBP29.64■■■□□ 2.34
SPG7-214ENST00000566371 RGPD3A6NKT7 1758 aaPredicted RBP29.64■■■□□ 2.34
SPG7-214ENST00000566371 RGPD4Q7Z3J3 1758 aa29.64■■■□□ 2.34
SPG7-214ENST00000566371 POLKQ9UBT6 870 aa29.63■■■□□ 2.33
SPG7-214ENST00000566371 WASHC2AQ641Q2 1341 aa29.63■■■□□ 2.33
SPG7-214ENST00000566371 EZH2Q15910 746 aaKnown RBP29.62■■■□□ 2.33
SPG7-214ENST00000566371 RREB1Q92766 1687 aa29.62■■■□□ 2.33
SPG7-214ENST00000566371 PPM1GO15355 546 aaPredicted RBP29.61■■■□□ 2.33
SPG7-214ENST00000566371 MEGF6O75095 1541 aa29.61■■■□□ 2.33
SPG7-214ENST00000566371 NHSQ6T4R5 1651 aa29.59■■■□□ 2.33
SPG7-214ENST00000566371 TNNT2P45379 298 aaPredicted RBP29.58■■■□□ 2.33
SPG7-214ENST00000566371 NCAPD2Q15021 1401 aa29.56■■■□□ 2.32
SPG7-214ENST00000566371 PLSCR1O15162 318 aa29.56■■■□□ 2.32
SPG7-214ENST00000566371 AMER1Q5JTC6 1135 aaPredicted RBP29.56■■■□□ 2.32
SPG7-214ENST00000566371 MORC1Q86VD1 984 aa29.56■■■□□ 2.32
SPG7-214ENST00000566371 USHBP1Q8N6Y0 703 aa29.56■■■□□ 2.32
SPG7-214ENST00000566371 SHANK3Q9BYB0 1731 aa29.56■■■□□ 2.32
SPG7-214ENST00000566371 NUP188Q5SRE5 1749 aa29.55■■■□□ 2.32
SPG7-214ENST00000566371 RAPGEF4Q8WZA2 1011 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms