RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 RAPGEF4Q8WZA2 1011 aa12.54□□□□□ -0.4
SNX29-205ENST00000566228 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
SNX29-205ENST00000566228 CCDC18Q5T9S5 1454 aa12.54□□□□□ -0.4
SNX29-205ENST00000566228 OPA1O60313 960 aa12.54□□□□□ -0.4
SNX29-205ENST00000566228 STK38Q15208 465 aa12.54□□□□□ -0.4
SNX29-205ENST00000566228 OSCARQ8IYS5 282 aa12.54□□□□□ -0.4
SNX29-205ENST00000566228 EHMT1Q9H9B1 1298 aa12.54□□□□□ -0.4
SNX29-205ENST00000566228 TTC21AQ8NDW8 1320 aa12.54□□□□□ -0.4
SNX29-205ENST00000566228 SYTL4Q96C24 671 aaPredicted RBP12.54□□□□□ -0.4
SNX29-205ENST00000566228 PPP1R9BQ96SB3 815 aa12.54□□□□□ -0.4
SNX29-205ENST00000566228 TSPY26PQ9H489 355 aa12.54□□□□□ -0.4
SNX29-205ENST00000566228 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
SNX29-205ENST00000566228 CEP112Q8N8E3 955 aa12.53□□□□□ -0.4
SNX29-205ENST00000566228 CUX2O14529 1486 aa12.53□□□□□ -0.4
SNX29-205ENST00000566228 NOL3O60936 208 aaKnown RBP12.53□□□□□ -0.4
SNX29-205ENST00000566228 PHF23Q9BUL5 403 aaPredicted RBP12.53□□□□□ -0.4
SNX29-205ENST00000566228 TNIKQ9UKE5 1360 aa12.53□□□□□ -0.4
SNX29-205ENST00000566228 PSME1Q06323 249 aa12.53□□□□□ -0.4
SNX29-205ENST00000566228 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
SNX29-205ENST00000566228 BRPF1P55201 1214 aaPredicted RBP12.53□□□□□ -0.4
SNX29-205ENST00000566228 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
SNX29-205ENST00000566228 CLUAP1Q96AJ1 413 aa12.53□□□□□ -0.4
SNX29-205ENST00000566228 BCL2L13Q9BXK5 485 aa12.53□□□□□ -0.4
SNX29-205ENST00000566228 SPA17Q15506 151 aa12.52□□□□□ -0.4
SNX29-205ENST00000566228 NUP155O75694 1391 aa12.52□□□□□ -0.41
SNX29-205ENST00000566228 POTEB2H3BUK9 544 aa12.52□□□□□ -0.41
SNX29-205ENST00000566228 WIZO95785 1651 aa12.52□□□□□ -0.41
SNX29-205ENST00000566228 LRSAM1Q6UWE0 723 aa12.52□□□□□ -0.41
SNX29-205ENST00000566228 STAC3Q96MF2 364 aa12.52□□□□□ -0.41
SNX29-205ENST00000566228 IKBKGQ9Y6K9 419 aa12.52□□□□□ -0.41
SNX29-205ENST00000566228 SSR1P43307 286 aaKnown RBP12.52□□□□□ -0.41
SNX29-205ENST00000566228 FKBP5Q13451 457 aaPredicted RBP12.52□□□□□ -0.41
SNX29-205ENST00000566228 ACTN2P35609 894 aa12.52□□□□□ -0.41
SNX29-205ENST00000566228 USH1CQ9Y6N9 552 aa12.52□□□□□ -0.41
SNX29-205ENST00000566228 CEP57L1Q8IYX8 460 aa12.51□□□□□ -0.41
SNX29-205ENST00000566228 TMOD2Q9NZR1 351 aa12.51□□□□□ -0.41
SNX29-205ENST00000566228 NOP2P46087 812 aaKnown RBP12.51□□□□□ -0.41
SNX29-205ENST00000566228 IFFO1Q0D2I5 559 aa12.51□□□□□ -0.41
SNX29-205ENST00000566228 SOGA1O94964 1423 aa12.51□□□□□ -0.41
SNX29-205ENST00000566228 GNAI1P63096 354 aa12.51□□□□□ -0.41
SNX29-205ENST00000566228 PKD2Q13563 968 aa12.51□□□□□ -0.41
SNX29-205ENST00000566228 CCDC158Q5M9N0 1113 aa12.51□□□□□ -0.41
SNX29-205ENST00000566228 LARP1Q6PKG0 1096 aaKnown RBP12.51□□□□□ -0.41
SNX29-205ENST00000566228 TSG101Q99816 390 aa12.51□□□□□ -0.41
SNX29-205ENST00000566228 MAP4K4O95819 1239 aaPredicted RBP12.51□□□□□ -0.41
SNX29-205ENST00000566228 KIAA1524Q8TCG1 905 aa12.51□□□□□ -0.41
SNX29-205ENST00000566228 GNAI3P08754 354 aa12.51□□□□□ -0.41
SNX29-205ENST00000566228 ZNF76P36508 570 aa12.51□□□□□ -0.41
SNX29-205ENST00000566228 KIF3CO14782 793 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 KLHL34Q8N239 644 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
SNX29-205ENST00000566228 ANAPC4Q9UJX5 808 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 CCDC172P0C7W6 258 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 ARHGAP29Q52LW3 1261 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 STXBP4Q6ZWJ1 553 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 ZSCAN12O43309 604 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 CTNNA2P26232 953 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 CCDC82Q8N4S0 544 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 SETSIPP0DME0 302 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 FKBP15Q5T1M5 1219 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 NEUROD6Q96NK8 337 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 SCAPERQ9BY12 1400 aa12.5□□□□□ -0.41
SNX29-205ENST00000566228 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
SNX29-205ENST00000566228 ZHX3Q9H4I2 956 aa12.49□□□□□ -0.41
SNX29-205ENST00000566228 CTNNA3Q9UI47 895 aa12.49□□□□□ -0.41
SNX29-205ENST00000566228 UBTFL1P0CB47 393 aaPredicted RBP12.49□□□□□ -0.41
SNX29-205ENST00000566228 RGS22Q8NE09 1264 aa12.49□□□□□ -0.41
SNX29-205ENST00000566228 PYM1Q9BRP8 204 aaKnown RBP12.49□□□□□ -0.41
SNX29-205ENST00000566228 SENP3-EIF4A1A0A087X0R7 540 aa12.49□□□□□ -0.41
SNX29-205ENST00000566228 MRPS9P82933 396 aaKnown RBP12.49□□□□□ -0.41
SNX29-205ENST00000566228 IFI16Q16666 785 aaKnown RBP12.49□□□□□ -0.41
SNX29-205ENST00000566228 SEPT10Q9P0V9 454 aa12.49□□□□□ -0.41
SNX29-205ENST00000566228 ATF3P18847 181 aa12.49□□□□□ -0.41
SNX29-205ENST00000566228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNX29-205ENST00000566228 CCDC110Q8TBZ0 833 aa12.49□□□□□ -0.41
SNX29-205ENST00000566228 PAFAH1B1P43034 410 aa12.49□□□□□ -0.41
SNX29-205ENST00000566228 CDC45O75419 566 aa12.49□□□□□ -0.41
SNX29-205ENST00000566228 EIF5P55010 431 aaKnown RBP12.49□□□□□ -0.41
SNX29-205ENST00000566228 KRT85P78386 507 aa12.49□□□□□ -0.41
SNX29-205ENST00000566228 CALCOCO1Q9P1Z2 691 aa12.49□□□□□ -0.41
SNX29-205ENST00000566228 NCAPGQ9BPX3 1015 aa12.48□□□□□ -0.41
SNX29-205ENST00000566228 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
SNX29-205ENST00000566228 USO1O60763 962 aaKnown RBP12.48□□□□□ -0.41
SNX29-205ENST00000566228 KRT32Q14532 448 aa12.48□□□□□ -0.41
SNX29-205ENST00000566228 NAP1L3Q99457 506 aaPredicted RBP12.48□□□□□ -0.41
SNX29-205ENST00000566228 CCDC102AQ96A19 550 aa12.48□□□□□ -0.41
SNX29-205ENST00000566228 CASTP20810 708 aaKnown RBP12.47□□□□□ -0.41
SNX29-205ENST00000566228 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
SNX29-205ENST00000566228 CCDC144AA2RUR9 1427 aa12.47□□□□□ -0.41
SNX29-205ENST00000566228 GMNNO75496 209 aa12.47□□□□□ -0.41
SNX29-205ENST00000566228 EIF2S2P20042 333 aaKnown RBP12.47□□□□□ -0.41
SNX29-205ENST00000566228 USP37Q86T82 979 aa12.47□□□□□ -0.41
SNX29-205ENST00000566228 STMN4Q9H169 189 aaPredicted RBP12.47□□□□□ -0.41
SNX29-205ENST00000566228 NOC2LQ9Y3T9 749 aaKnown RBP12.47□□□□□ -0.41
SNX29-205ENST00000566228 WDR33Q9C0J8 1336 aaKnown RBP12.47□□□□□ -0.41
SNX29-205ENST00000566228 WDR66Q8TBY9 1149 aa12.47□□□□□ -0.41
SNX29-205ENST00000566228 UBXN4Q92575 508 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms