RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 PHLPP1O60346 1717 aa12.76□□□□□ -0.37
CDH13-207ENST00000565636 ONECUT3O60422 494 aaPredicted RBP12.75□□□□□ -0.37
CDH13-207ENST00000565636 SPATA31A6Q5VVP1 1343 aa12.75□□□□□ -0.37
CDH13-207ENST00000565636 IQGAP3Q86VI3 1631 aa12.75□□□□□ -0.37
CDH13-207ENST00000565636 LAPTM4BQ86VI4 370 aa12.75□□□□□ -0.37
CDH13-207ENST00000565636 ANKK1Q8NFD2 765 aa12.75□□□□□ -0.37
CDH13-207ENST00000565636 BCANQ96GW7 911 aa12.75□□□□□ -0.37
CDH13-207ENST00000565636 E9PCH4 1651 aa12.74□□□□□ -0.37
CDH13-207ENST00000565636 PPP1R15AO75807 674 aaPredicted RBP12.74□□□□□ -0.37
CDH13-207ENST00000565636 COL9A1P20849 921 aa12.74□□□□□ -0.37
CDH13-207ENST00000565636 DDX12PQ92771 950 aa12.74□□□□□ -0.37
CDH13-207ENST00000565636 FAM50AQ14320 339 aaKnown RBP12.73□□□□□ -0.37
CDH13-207ENST00000565636 PDIA6Q15084 440 aa12.73□□□□□ -0.37
CDH13-207ENST00000565636 PROX2Q3B8N5 592 aa12.73□□□□□ -0.37
CDH13-207ENST00000565636 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
CDH13-207ENST00000565636 DCCP43146 1447 aa12.71□□□□□ -0.37
CDH13-207ENST00000565636 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.71□□□□□ -0.37
CDH13-207ENST00000565636 TRPM2O94759 1503 aa12.71□□□□□ -0.38
CDH13-207ENST00000565636 ATF3P18847 181 aa12.7□□□□□ -0.38
CDH13-207ENST00000565636 NBR1Q14596 966 aa12.7□□□□□ -0.38
CDH13-207ENST00000565636 ZNF772Q68DY9 489 aaPredicted RBP12.7□□□□□ -0.38
CDH13-207ENST00000565636 SHPRHQ149N8 1683 aa12.7□□□□□ -0.38
CDH13-207ENST00000565636 ADAMTS13Q76LX8 1427 aa12.7□□□□□ -0.38
CDH13-207ENST00000565636 COL16A1Q07092 1604 aaPredicted RBP12.7□□□□□ -0.38
CDH13-207ENST00000565636 AHDC1Q5TGY3 1603 aaPredicted RBP12.7□□□□□ -0.38
CDH13-207ENST00000565636 MAP3K7O43318 606 aa12.69□□□□□ -0.38
CDH13-207ENST00000565636 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
CDH13-207ENST00000565636 KIAA1468Q9P260 1216 aa12.69□□□□□ -0.38
CDH13-207ENST00000565636 NUP155O75694 1391 aa12.67□□□□□ -0.38
CDH13-207ENST00000565636 SETBP1Q9Y6X0 1596 aa12.66□□□□□ -0.38
CDH13-207ENST00000565636 TRIM6-TRIM34B2RNG4 842 aa12.66□□□□□ -0.38
CDH13-207ENST00000565636 EN1Q05925 392 aaPredicted RBP12.66□□□□□ -0.38
CDH13-207ENST00000565636 AMOTL2Q9Y2J4 779 aa12.66□□□□□ -0.38
CDH13-207ENST00000565636 ARIH1Q9Y4X5 557 aaPredicted RBP12.66□□□□□ -0.38
CDH13-207ENST00000565636 SPHKAPQ2M3C7 1700 aa12.65□□□□□ -0.38
CDH13-207ENST00000565636 KIF1BO60333 1816 aa12.65□□□□□ -0.39
CDH13-207ENST00000565636 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
CDH13-207ENST00000565636 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
CDH13-207ENST00000565636 C14orf37Q86TY3 774 aa12.64□□□□□ -0.39
CDH13-207ENST00000565636 PACS2Q86VP3 889 aa12.64□□□□□ -0.39
CDH13-207ENST00000565636 CDK12Q9NYV4 1490 aaPredicted RBP12.64□□□□□ -0.39
CDH13-207ENST00000565636 LRRC59Q96AG4 307 aaKnown RBP12.63□□□□□ -0.39
CDH13-207ENST00000565636 ZFRQ96KR1 1074 aaKnown RBP12.63□□□□□ -0.39
CDH13-207ENST00000565636 SETD5Q9C0A6 1442 aa12.62□□□□□ -0.39
CDH13-207ENST00000565636 XRN1Q8IZH2 1706 aaKnown RBP12.62□□□□□ -0.39
CDH13-207ENST00000565636 FAM98CQ17RN3 349 aaKnown RBP12.62□□□□□ -0.39
CDH13-207ENST00000565636 SETD1AO15047 1707 aaKnown RBP12.62□□□□□ -0.39
CDH13-207ENST00000565636 SOWAHBA6NEL2 793 aa12.61□□□□□ -0.39
CDH13-207ENST00000565636 NHSL1Q5SYE7 1610 aa12.61□□□□□ -0.39
CDH13-207ENST00000565636 RPGRIP1LQ68CZ1 1315 aa12.61□□□□□ -0.39
CDH13-207ENST00000565636 NRXN3Q9Y4C0 1643 aa12.6□□□□□ -0.39
CDH13-207ENST00000565636 GRXCR2A6NFK2 248 aa12.6□□□□□ -0.39
CDH13-207ENST00000565636 BRINP3Q76B58 766 aa12.6□□□□□ -0.39
CDH13-207ENST00000565636 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
CDH13-207ENST00000565636 LAMC1P11047 1609 aa12.59□□□□□ -0.39
CDH13-207ENST00000565636 SEPT9Q9UHD8 586 aaPredicted RBP12.59□□□□□ -0.39
CDH13-207ENST00000565636 PTPRUQ92729 1446 aa12.59□□□□□ -0.39
CDH13-207ENST00000565636 RGS20O76081 388 aa12.58□□□□□ -0.4
CDH13-207ENST00000565636 RXRBP28702 533 aa12.58□□□□□ -0.4
CDH13-207ENST00000565636 BCAMP50895 628 aa12.58□□□□□ -0.4
CDH13-207ENST00000565636 MEX3CQ5U5Q3 659 aaKnown RBP12.58□□□□□ -0.4
CDH13-207ENST00000565636 PRAG1Q86YV5 1406 aa12.58□□□□□ -0.4
CDH13-207ENST00000565636 MST1RQ04912 1400 aa12.57□□□□□ -0.4
CDH13-207ENST00000565636 TSR1Q2NL82 804 aaKnown RBP12.57□□□□□ -0.4
CDH13-207ENST00000565636 LRCH3Q96II8 777 aa12.57□□□□□ -0.4
CDH13-207ENST00000565636 ADGRL3Q9HAR2 1447 aa12.56□□□□□ -0.4
CDH13-207ENST00000565636 ZNF326Q5BKZ1 582 aaKnown RBP12.56□□□□□ -0.4
CDH13-207ENST00000565636 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.56□□□□□ -0.4
CDH13-207ENST00000565636 ASXL1Q8IXJ9 1541 aa12.56□□□□□ -0.4
CDH13-207ENST00000565636 LRP6O75581 1613 aa12.55□□□□□ -0.4
CDH13-207ENST00000565636 NUTM2DQ5VT03 806 aaPredicted RBP12.55□□□□□ -0.4
CDH13-207ENST00000565636 NEXMIFQ5QGS0 1516 aa12.54□□□□□ -0.4
CDH13-207ENST00000565636 METP08581 1390 aa12.54□□□□□ -0.4
CDH13-207ENST00000565636 PTCH1Q13635 1447 aa12.54□□□□□ -0.4
CDH13-207ENST00000565636 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
CDH13-207ENST00000565636 PRSS12P56730 875 aa12.53□□□□□ -0.4
CDH13-207ENST00000565636 RBM6P78332 1123 aaKnown RBP12.53□□□□□ -0.4
CDH13-207ENST00000565636 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
CDH13-207ENST00000565636 NGLY1Q96IV0 654 aa12.52□□□□□ -0.41
CDH13-207ENST00000565636 TSR3Q9UJK0 312 aaKnown RBP12.52□□□□□ -0.41
CDH13-207ENST00000565636 CLTCL1P53675 1640 aa12.51□□□□□ -0.41
CDH13-207ENST00000565636 NBPF26B4DH59 902 aa12.51□□□□□ -0.41
CDH13-207ENST00000565636 TSKSQ9UJT2 592 aa12.51□□□□□ -0.41
CDH13-207ENST00000565636 SOS2Q07890 1332 aaPredicted RBP12.51□□□□□ -0.41
CDH13-207ENST00000565636 HFM1A2PYH4 1435 aa12.51□□□□□ -0.41
CDH13-207ENST00000565636 NALCNQ8IZF0 1738 aa12.51□□□□□ -0.41
CDH13-207ENST00000565636 A0A0G2JS52 829 aa12.5□□□□□ -0.41
CDH13-207ENST00000565636 QTRT2Q9H974 415 aaKnown RBP12.5□□□□□ -0.41
CDH13-207ENST00000565636 WBP1LQ9NX94 342 aa12.5□□□□□ -0.41
CDH13-207ENST00000565636 AFF2P51816 1311 aa12.5□□□□□ -0.41
CDH13-207ENST00000565636 NAIPQ13075 1403 aa12.5□□□□□ -0.41
CDH13-207ENST00000565636 PPLO60437 1756 aa12.5□□□□□ -0.41
CDH13-207ENST00000565636 C1orf167Q5SNV9 1468 aa12.49□□□□□ -0.41
CDH13-207ENST00000565636 PNPLA6Q8IY17 1366 aa12.49□□□□□ -0.41
CDH13-207ENST00000565636 ITGBL1O95965 494 aaPredicted RBP12.49□□□□□ -0.41
CDH13-207ENST00000565636 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
CDH13-207ENST00000565636 ITGAEP38570 1179 aa12.48□□□□□ -0.41
CDH13-207ENST00000565636 CCDC125Q86Z20 511 aa12.48□□□□□ -0.41
CDH13-207ENST00000565636 FNBP4Q8N3X1 1017 aaPredicted RBP12.48□□□□□ -0.41
CDH13-207ENST00000565636 COL22A1Q8NFW1 1626 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms