RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, human

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40C-209	ENST00000565511	EZH2	Q15910	746 aa	Known RBP	33.73	■■■□□ 2.99
RAB40C-209	ENST00000565511	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.72	■■■□□ 2.99
RAB40C-209	ENST00000565511	RREB1	Q92766	1687 aa		33.71	■■■□□ 2.99
RAB40C-209	ENST00000565511	SLC12A5	Q9H2X9	1139 aa		33.71	■■■□□ 2.99
RAB40C-209	ENST00000565511	LRP5	O75197	1615 aa		33.71	■■■□□ 2.99
RAB40C-209	ENST00000565511	NME9	Q86XW9	330 aa		33.7	■■■□□ 2.99
RAB40C-209	ENST00000565511	CAMKK2	Q96RR4	588 aa		33.7	■■■□□ 2.99
RAB40C-209	ENST00000565511	WDR17	Q8IZU2	1322 aa		33.7	■■■□□ 2.99
RAB40C-209	ENST00000565511	KCNH5	Q8NCM2	988 aa		33.69	■■■□□ 2.98
RAB40C-209	ENST00000565511	TMC1	Q8TDI8	760 aa		33.69	■■■□□ 2.98
RAB40C-209	ENST00000565511	TESK2	Q96S53	571 aa		33.69	■■■□□ 2.98
RAB40C-209	ENST00000565511	USP31	Q70CQ4	1352 aa		33.69	■■■□□ 2.98
RAB40C-209	ENST00000565511	SBF2	Q86WG5	1849 aa		33.68	■■■□□ 2.98
RAB40C-209	ENST00000565511	TOM1L2	Q6ZVM7	507 aa		33.68	■■■□□ 2.98
RAB40C-209	ENST00000565511	NUP188	Q5SRE5	1749 aa		33.67	■■■□□ 2.98
RAB40C-209	ENST00000565511	LTN1	O94822	1766 aa		33.67	■■■□□ 2.98
RAB40C-209	ENST00000565511		A0A1W2PP64	1363 aa		33.67	■■■□□ 2.98
RAB40C-209	ENST00000565511	ABCC6	O95255	1503 aa		33.65	■■■□□ 2.98
RAB40C-209	ENST00000565511	APBA3	O96018	575 aa		33.65	■■■□□ 2.98
RAB40C-209	ENST00000565511	ST20-MTHFS	A0A0A6YYL1	179 aa		33.64	■■■□□ 2.98
RAB40C-209	ENST00000565511	EDC4	Q6P2E9	1401 aa	Known RBP	33.63	■■■□□ 2.97
RAB40C-209	ENST00000565511	R3HDM1	Q15032	1099 aa	Known RBP	33.61	■■■□□ 2.97
RAB40C-209	ENST00000565511	OVOS2	A0A0G2JMS6	1433 aa		33.61	■■■□□ 2.97
RAB40C-209	ENST00000565511	OVOS2	A0A0J9YW53	1432 aa		33.61	■■■□□ 2.97
RAB40C-209	ENST00000565511	OVOS2	Q6IE36	1432 aa		33.61	■■■□□ 2.97
RAB40C-209	ENST00000565511	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.59	■■■□□ 2.97
RAB40C-209	ENST00000565511	DDB1	Q16531	1140 aa		33.57	■■■□□ 2.96
RAB40C-209	ENST00000565511	CARD10	Q9BWT7	1032 aa		33.57	■■■□□ 2.96
RAB40C-209	ENST00000565511	CSB-PGBD3	P0DP91	1061 aa		33.56	■■■□□ 2.96
RAB40C-209	ENST00000565511	PTF1A	Q7RTS3	328 aa		33.56	■■■□□ 2.96
RAB40C-209	ENST00000565511	PUS7	Q96PZ0	661 aa	Known RBP	33.56	■■■□□ 2.96
RAB40C-209	ENST00000565511	PARD3	Q8TEW0	1356 aa		33.56	■■■□□ 2.96
RAB40C-209	ENST00000565511	MARCH10	Q8NA82	808 aa	Predicted RBP	33.55	■■■□□ 2.96
RAB40C-209	ENST00000565511	TERF2IP	Q9NYB0	399 aa		33.53	■■■□□ 2.96
RAB40C-209	ENST00000565511	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.51	■■■□□ 2.95
RAB40C-209	ENST00000565511	RGPD4	Q7Z3J3	1758 aa		33.51	■■■□□ 2.95
RAB40C-209	ENST00000565511	ERBB3	P21860	1342 aa		33.51	■■■□□ 2.95
RAB40C-209	ENST00000565511	USP47	Q96K76	1375 aa		33.5	■■■□□ 2.95
RAB40C-209	ENST00000565511	CCDC7	Q96M83	1385 aa		33.48	■■■□□ 2.95
RAB40C-209	ENST00000565511	NINL	Q9Y2I6	1382 aa		33.47	■■■□□ 2.95
RAB40C-209	ENST00000565511	TNS2	Q63HR2	1409 aa		33.46	■■■□□ 2.95
RAB40C-209	ENST00000565511	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.46	■■■□□ 2.95
RAB40C-209	ENST00000565511	BCL9	O00512	1426 aa		33.45	■■■□□ 2.95
RAB40C-209	ENST00000565511	C11orf95	C9JLR9	678 aa	Predicted RBP	33.42	■■■□□ 2.94
RAB40C-209	ENST00000565511	ANKRD24	Q8TF21	1146 aa		33.42	■■■□□ 2.94
RAB40C-209	ENST00000565511	NLRP2	Q9NX02	1062 aa		33.42	■■■□□ 2.94
RAB40C-209	ENST00000565511	FBLN1	P23142	703 aa		33.41	■■■□□ 2.94
RAB40C-209	ENST00000565511	ANKRD36B	Q8N2N9	1353 aa		33.41	■■■□□ 2.94
RAB40C-209	ENST00000565511	MYOM1	P52179	1685 aa		33.39	■■■□□ 2.94
RAB40C-209	ENST00000565511	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.39	■■■□□ 2.94
RAB40C-209	ENST00000565511	RGPD2	P0DJD1	1756 aa		33.38	■■■□□ 2.93
RAB40C-209	ENST00000565511	NHS	Q6T4R5	1651 aa		33.38	■■■□□ 2.93
RAB40C-209	ENST00000565511	EXOC5	O00471	708 aa		33.37	■■■□□ 2.93
RAB40C-209	ENST00000565511	FAM208A	Q9UK61	1670 aa	Known RBP	33.36	■■■□□ 2.93
RAB40C-209	ENST00000565511	PLSCR1	O15162	318 aa		33.35	■■■□□ 2.93
RAB40C-209	ENST00000565511	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.35	■■■□□ 2.93
RAB40C-209	ENST00000565511	MAP3K19	Q56UN5	1328 aa		33.34	■■■□□ 2.93
RAB40C-209	ENST00000565511	TMF1	P82094	1093 aa		33.34	■■■□□ 2.93
RAB40C-209	ENST00000565511	PROM2	Q8N271	834 aa		33.34	■■■□□ 2.93
RAB40C-209	ENST00000565511	IP6K1	Q92551	441 aa		33.34	■■■□□ 2.93
RAB40C-209	ENST00000565511	KIF20B	Q96Q89	1820 aa		33.33	■■■□□ 2.93
RAB40C-209	ENST00000565511	KCNQ2	O43526	872 aa		33.32	■■■□□ 2.92
RAB40C-209	ENST00000565511	COG3	Q96JB2	828 aa		33.32	■■■□□ 2.92
RAB40C-209	ENST00000565511	IL2RB	P14784	551 aa		33.31	■■■□□ 2.92
RAB40C-209	ENST00000565511	NBPF14	Q5TI25	921 aa		33.31	■■■□□ 2.92
RAB40C-209	ENST00000565511	LTV1	Q96GA3	475 aa	Predicted RBP	33.31	■■■□□ 2.92
RAB40C-209	ENST00000565511	PCGF6	Q9BYE7	350 aa		33.31	■■■□□ 2.92
RAB40C-209	ENST00000565511	SLC24A1	O60721	1099 aa		33.3	■■■□□ 2.92
RAB40C-209	ENST00000565511	CASZ1	Q86V15	1759 aa		33.29	■■■□□ 2.92
RAB40C-209	ENST00000565511	HOXC9	P31274	260 aa		33.28	■■■□□ 2.92
RAB40C-209	ENST00000565511	GGNBP2	Q9H3C7	697 aa		33.28	■■■□□ 2.92
RAB40C-209	ENST00000565511	BTAF1	O14981	1849 aa		33.28	■■■□□ 2.92
RAB40C-209	ENST00000565511	FYB1	O15117	783 aa		33.27	■■■□□ 2.92
RAB40C-209	ENST00000565511	ACSBG1	Q96GR2	724 aa		33.27	■■■□□ 2.92
RAB40C-209	ENST00000565511	SHANK3	Q9BYB0	1731 aa		33.27	■■■□□ 2.92
RAB40C-209	ENST00000565511	RRS1	Q15050	365 aa	Known RBP	33.24	■■■□□ 2.91
RAB40C-209	ENST00000565511	KAT6B	Q8WYB5	2073 aa		33.22	■■■□□ 2.91
RAB40C-209	ENST00000565511	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.22	■■■□□ 2.91
RAB40C-209	ENST00000565511	TXNRD1	Q16881	649 aa		33.21	■■■□□ 2.91
RAB40C-209	ENST00000565511	CARD14	Q9BXL6	1004 aa		33.21	■■■□□ 2.91
RAB40C-209	ENST00000565511	CLSPN	Q9HAW4	1339 aa		33.21	■■■□□ 2.91
RAB40C-209	ENST00000565511	MEGF6	O75095	1541 aa		33.2	■■■□□ 2.91
RAB40C-209	ENST00000565511	AMPH	P49418	695 aa		33.2	■■■□□ 2.91
RAB40C-209	ENST00000565511	TIMELESS	Q9UNS1	1208 aa		33.2	■■■□□ 2.91
RAB40C-209	ENST00000565511	RTL1	A6NKG5	1358 aa		33.2	■■■□□ 2.9
RAB40C-209	ENST00000565511	PAPPA	Q13219	1627 aa		33.19	■■■□□ 2.9
RAB40C-209	ENST00000565511	NSD3	Q9BZ95	1437 aa		33.17	■■■□□ 2.9
RAB40C-209	ENST00000565511	DOT1L	Q8TEK3	1739 aa		33.16	■■■□□ 2.9
RAB40C-209	ENST00000565511	CDCA8	Q53HL2	280 aa		33.14	■■■□□ 2.9
RAB40C-209	ENST00000565511	NBPF6	Q5VWK0	638 aa		33.12	■■■□□ 2.89
RAB40C-209	ENST00000565511	USHBP1	Q8N6Y0	703 aa		33.12	■■■□□ 2.89
RAB40C-209	ENST00000565511	DDX54	Q8TDD1	881 aa	Known RBP	33.12	■■■□□ 2.89
RAB40C-209	ENST00000565511	NBPF4	Q96M43	638 aa		33.12	■■■□□ 2.89
RAB40C-209	ENST00000565511	SPON1	Q9HCB6	807 aa		33.11	■■■□□ 2.89
RAB40C-209	ENST00000565511	HSP90AB2P	Q58FF8	381 aa		33.08	■■■□□ 2.89
RAB40C-209	ENST00000565511	ANKRD26	Q9UPS8	1709 aa		33.08	■■■□□ 2.89
RAB40C-209	ENST00000565511	SLC15A2	Q16348	729 aa		33.06	■■■□□ 2.88
RAB40C-209	ENST00000565511	STK32B	Q9NY57	414 aa		33.06	■■■□□ 2.88
RAB40C-209	ENST00000565511	NSD2	O96028	1365 aa		33.06	■■■□□ 2.88
RAB40C-209	ENST00000565511	INSR	P06213	1382 aa		33.06	■■■□□ 2.88

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