RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 USP54Q70EL1 1684 aa28.64■■■□□ 2.17
COTL1-204ENST00000564662 KTN1Q86UP2 1357 aaKnown RBP28.63■■■□□ 2.17
COTL1-204ENST00000564662 RGPD3A6NKT7 1758 aaPredicted RBP28.63■■■□□ 2.17
COTL1-204ENST00000564662 RGPD4Q7Z3J3 1758 aa28.63■■■□□ 2.17
COTL1-204ENST00000564662 SOX12O15370 315 aa28.63■■■□□ 2.17
COTL1-204ENST00000564662 TOM1L2Q6ZVM7 507 aa28.63■■■□□ 2.17
COTL1-204ENST00000564662 ZNF692Q9BU19 519 aaPredicted RBP28.63■■■□□ 2.17
COTL1-204ENST00000564662 TTC21AQ8NDW8 1320 aa28.63■■■□□ 2.17
COTL1-204ENST00000564662 LTN1O94822 1766 aa28.62■■■□□ 2.17
COTL1-204ENST00000564662 SBNO2Q9Y2G9 1366 aa28.62■■■□□ 2.17
COTL1-204ENST00000564662 AXIN2Q9Y2T1 843 aa28.6■■■□□ 2.17
COTL1-204ENST00000564662 WDR17Q8IZU2 1322 aa28.6■■■□□ 2.17
COTL1-204ENST00000564662 KCNH5Q8NCM2 988 aa28.59■■■□□ 2.17
COTL1-204ENST00000564662 ABCC6O95255 1503 aa28.58■■■□□ 2.17
COTL1-204ENST00000564662 ARHGEF25Q86VW2 580 aa28.57■■■□□ 2.16
COTL1-204ENST00000564662 CARD11Q9BXL7 1154 aa28.57■■■□□ 2.16
COTL1-204ENST00000564662 DDB1Q16531 1140 aa28.56■■■□□ 2.16
COTL1-204ENST00000564662 TONSLQ96HA7 1378 aa28.56■■■□□ 2.16
COTL1-204ENST00000564662 CD163L1Q9NR16 1453 aa28.55■■■□□ 2.16
COTL1-204ENST00000564662 C11orf95C9JLR9 678 aaPredicted RBP28.53■■■□□ 2.16
COTL1-204ENST00000564662 CSB-PGBD3P0DP91 1061 aa28.53■■■□□ 2.16
COTL1-204ENST00000564662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.52■■■□□ 2.16
COTL1-204ENST00000564662 NBPF14Q5TI25 921 aa28.49■■■□□ 2.15
COTL1-204ENST00000564662 TMC1Q8TDI8 760 aa28.48■■■□□ 2.15
COTL1-204ENST00000564662 USP31Q70CQ4 1352 aa28.48■■■□□ 2.15
COTL1-204ENST00000564662 NME9Q86XW9 330 aa28.47■■■□□ 2.15
COTL1-204ENST00000564662 CDCA7Q9BWT1 371 aaPredicted RBP28.47■■■□□ 2.15
COTL1-204ENST00000564662 CARD10Q9BWT7 1032 aa28.47■■■□□ 2.15
COTL1-204ENST00000564662 CCDC7Q96M83 1385 aa28.46■■■□□ 2.15
COTL1-204ENST00000564662 TNS2Q63HR2 1409 aa28.45■■■□□ 2.15
COTL1-204ENST00000564662 EDC4Q6P2E9 1401 aaKnown RBP28.45■■■□□ 2.15
COTL1-204ENST00000564662 MARCH10Q8NA82 808 aaPredicted RBP28.45■■■□□ 2.14
COTL1-204ENST00000564662 HDGFL2Q7Z4V5 671 aaPredicted RBP28.44■■■□□ 2.14
COTL1-204ENST00000564662 NHSQ6T4R5 1651 aa28.43■■■□□ 2.14
COTL1-204ENST00000564662 A0A1W2PP64 1363 aa28.43■■■□□ 2.14
COTL1-204ENST00000564662 PTF1AQ7RTS3 328 aa28.43■■■□□ 2.14
COTL1-204ENST00000564662 BCL9O00512 1426 aa28.43■■■□□ 2.14
COTL1-204ENST00000564662 CASZ1Q86V15 1759 aa28.42■■■□□ 2.14
COTL1-204ENST00000564662 SLC12A5Q9H2X9 1139 aa28.42■■■□□ 2.14
COTL1-204ENST00000564662 BCL11BQ9C0K0 894 aaPredicted RBP28.41■■■□□ 2.14
COTL1-204ENST00000564662 ERBB3P21860 1342 aa28.4■■■□□ 2.14
COTL1-204ENST00000564662 FAM208AQ9UK61 1670 aaKnown RBP28.39■■■□□ 2.14
COTL1-204ENST00000564662 PLSCR1O15162 318 aa28.39■■■□□ 2.14
COTL1-204ENST00000564662 TERF2IPQ9NYB0 399 aa28.38■■■□□ 2.13
COTL1-204ENST00000564662 EXOC5O00471 708 aa28.37■■■□□ 2.13
COTL1-204ENST00000564662 ANO8Q9HCE9 1232 aaPredicted RBP28.36■■■□□ 2.13
COTL1-204ENST00000564662 NLRP2Q9NX02 1062 aa28.35■■■□□ 2.13
COTL1-204ENST00000564662 BTAF1O14981 1849 aa28.34■■■□□ 2.13
COTL1-204ENST00000564662 ANKRD24Q8TF21 1146 aa28.32■■■□□ 2.12
COTL1-204ENST00000564662 SPON1Q9HCB6 807 aa28.32■■■□□ 2.12
COTL1-204ENST00000564662 NINLQ9Y2I6 1382 aa28.32■■■□□ 2.12
COTL1-204ENST00000564662 TESK2Q96S53 571 aa28.31■■■□□ 2.12
COTL1-204ENST00000564662 RGPD2P0DJD1 1756 aa28.3■■■□□ 2.12
COTL1-204ENST00000564662 ST20-MTHFSA0A0A6YYL1 179 aa28.3■■■□□ 2.12
COTL1-204ENST00000564662 KCNQ2O43526 872 aa28.3■■■□□ 2.12
COTL1-204ENST00000564662 PUS7Q96PZ0 661 aaKnown RBP28.3■■■□□ 2.12
COTL1-204ENST00000564662 PPP1R1BQ9UD71 204 aaPredicted RBP28.3■■■□□ 2.12
COTL1-204ENST00000564662 IL2RBP14784 551 aa28.29■■■□□ 2.12
COTL1-204ENST00000564662 PROM2Q8N271 834 aa28.28■■■□□ 2.12
COTL1-204ENST00000564662 KAT6BQ8WYB5 2073 aa28.27■■■□□ 2.12
COTL1-204ENST00000564662 MYOM1P52179 1685 aa28.27■■■□□ 2.12
COTL1-204ENST00000564662 TXNRD1Q16881 649 aa28.26■■■□□ 2.11
COTL1-204ENST00000564662 ACSBG1Q96GR2 724 aa28.26■■■□□ 2.11
COTL1-204ENST00000564662 KIF20BQ96Q89 1820 aa28.25■■■□□ 2.11
COTL1-204ENST00000564662 PAPPAQ13219 1627 aa28.25■■■□□ 2.11
COTL1-204ENST00000564662 PDGFDQ9GZP0 370 aaPredicted RBP28.23■■■□□ 2.11
COTL1-204ENST00000564662 DOT1LQ8TEK3 1739 aa28.23■■■□□ 2.11
COTL1-204ENST00000564662 SHANK3Q9BYB0 1731 aa28.23■■■□□ 2.11
COTL1-204ENST00000564662 LTV1Q96GA3 475 aaPredicted RBP28.21■■■□□ 2.11
COTL1-204ENST00000564662 COG3Q96JB2 828 aa28.21■■■□□ 2.11
COTL1-204ENST00000564662 STK32BQ9NY57 414 aa28.21■■■□□ 2.11
COTL1-204ENST00000564662 ANKRD36BQ8N2N9 1353 aa28.21■■■□□ 2.11
COTL1-204ENST00000564662 IP6K1Q92551 441 aa28.2■■■□□ 2.1
COTL1-204ENST00000564662 USP47Q96K76 1375 aa28.2■■■□□ 2.1
COTL1-204ENST00000564662 MAP3K19Q56UN5 1328 aa28.18■■■□□ 2.1
COTL1-204ENST00000564662 ZBTB7AO95365 584 aa28.18■■■□□ 2.1
COTL1-204ENST00000564662 TRIM26Q12899 539 aaPredicted RBP28.18■■■□□ 2.1
COTL1-204ENST00000564662 SLC15A2Q16348 729 aa28.17■■■□□ 2.1
COTL1-204ENST00000564662 SLC24A1O60721 1099 aa28.16■■■□□ 2.1
COTL1-204ENST00000564662 FBLN1P23142 703 aa28.15■■■□□ 2.1
COTL1-204ENST00000564662 HOXC9P31274 260 aa28.15■■■□□ 2.1
COTL1-204ENST00000564662 AMPHP49418 695 aa28.13■■■□□ 2.09
COTL1-204ENST00000564662 TMF1P82094 1093 aa28.13■■■□□ 2.09
COTL1-204ENST00000564662 RTL1A6NKG5 1358 aa28.12■■■□□ 2.09
COTL1-204ENST00000564662 MEGF6O75095 1541 aa28.12■■■□□ 2.09
COTL1-204ENST00000564662 TUBGCP6Q96RT7 1819 aa28.11■■■□□ 2.09
COTL1-204ENST00000564662 DDX54Q8TDD1 881 aaKnown RBP28.11■■■□□ 2.09
COTL1-204ENST00000564662 ATF5Q9Y2D1 282 aaPredicted RBP28.11■■■□□ 2.09
COTL1-204ENST00000564662 QSER1Q2KHR3 1735 aa28.11■■■□□ 2.09
COTL1-204ENST00000564662 PTGER2P43116 358 aa28.09■■■□□ 2.09
COTL1-204ENST00000564662 GGNBP2Q9H3C7 697 aa28.09■■■□□ 2.09
COTL1-204ENST00000564662 LY75O60449 1722 aa28.09■■■□□ 2.09
COTL1-204ENST00000564662 RRS1Q15050 365 aaKnown RBP28.08■■■□□ 2.09
COTL1-204ENST00000564662 DCAF8L1A6NGE4 600 aa28.07■■■□□ 2.08
COTL1-204ENST00000564662 YY1P25490 414 aa28.06■■■□□ 2.08
COTL1-204ENST00000564662 SMG6Q86US8 1419 aaKnown RBP28.06■■■□□ 2.08
COTL1-204ENST00000564662 FYB1O15117 783 aa28.05■■■□□ 2.08
COTL1-204ENST00000564662 MTFR1LQ9H019 292 aa28.05■■■□□ 2.08
COTL1-204ENST00000564662 ZNF827Q17R98 1081 aa28.04■■■□□ 2.08
COTL1-204ENST00000564662 SYTL4Q96C24 671 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms