RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 ZBTB7CA1YPR0 619 aa26.86■■□□□ 1.89
NME3-207ENST00000564628 DDB1Q16531 1140 aa26.85■■□□□ 1.89
NME3-207ENST00000564628 TOM1L2Q6ZVM7 507 aa26.85■■□□□ 1.89
NME3-207ENST00000564628 ZNF692Q9BU19 519 aaPredicted RBP26.85■■□□□ 1.89
NME3-207ENST00000564628 CCER1Q8TC90 406 aaPredicted RBP26.84■■□□□ 1.89
NME3-207ENST00000564628 WDR17Q8IZU2 1322 aa26.84■■□□□ 1.89
NME3-207ENST00000564628 CPSF1Q10570 1443 aaKnown RBP26.83■■□□□ 1.89
NME3-207ENST00000564628 PLSCR1O15162 318 aa26.83■■□□□ 1.89
NME3-207ENST00000564628 SBF2Q86WG5 1849 aa26.82■■□□□ 1.88
NME3-207ENST00000564628 KCNH5Q8NCM2 988 aa26.82■■□□□ 1.88
NME3-207ENST00000564628 CDCA7Q9BWT1 371 aaPredicted RBP26.82■■□□□ 1.88
NME3-207ENST00000564628 AXIN2Q9Y2T1 843 aa26.82■■□□□ 1.88
NME3-207ENST00000564628 WNK3Q9BYP7 1800 aa26.81■■□□□ 1.88
NME3-207ENST00000564628 ARHGEF25Q86VW2 580 aa26.81■■□□□ 1.88
NME3-207ENST00000564628 TTC21BQ7Z4L5 1316 aa26.81■■□□□ 1.88
NME3-207ENST00000564628 AKAP12Q02952 1782 aa26.81■■□□□ 1.88
NME3-207ENST00000564628 BCL9O00512 1426 aa26.81■■□□□ 1.88
NME3-207ENST00000564628 TTC21AQ8NDW8 1320 aa26.8■■□□□ 1.88
NME3-207ENST00000564628 CARD11Q9BXL7 1154 aa26.79■■□□□ 1.88
NME3-207ENST00000564628 BCL11BQ9C0K0 894 aaPredicted RBP26.79■■□□□ 1.88
NME3-207ENST00000564628 SPON1Q9HCB6 807 aa26.79■■□□□ 1.88
NME3-207ENST00000564628 SBNO2Q9Y2G9 1366 aa26.77■■□□□ 1.88
NME3-207ENST00000564628 KCNQ2O43526 872 aa26.77■■□□□ 1.88
NME3-207ENST00000564628 CARD10Q9BWT7 1032 aa26.76■■□□□ 1.87
NME3-207ENST00000564628 MARCH10Q8NA82 808 aaPredicted RBP26.75■■□□□ 1.87
NME3-207ENST00000564628 NFAT5O94916 1531 aa26.75■■□□□ 1.87
NME3-207ENST00000564628 ABCC6O95255 1503 aa26.75■■□□□ 1.87
NME3-207ENST00000564628 PPP1R1BQ9UD71 204 aaPredicted RBP26.73■■□□□ 1.87
NME3-207ENST00000564628 NINLQ9Y2I6 1382 aa26.72■■□□□ 1.87
NME3-207ENST00000564628 RGPD5Q99666 1765 aa26.72■■□□□ 1.87
NME3-207ENST00000564628 KTN1Q86UP2 1357 aaKnown RBP26.71■■□□□ 1.87
NME3-207ENST00000564628 CSB-PGBD3P0DP91 1061 aa26.71■■□□□ 1.87
NME3-207ENST00000564628 PTF1AQ7RTS3 328 aa26.71■■□□□ 1.87
NME3-207ENST00000564628 CCDC7Q96M83 1385 aa26.71■■□□□ 1.87
NME3-207ENST00000564628 MON2Q7Z3U7 1717 aa26.7■■□□□ 1.86
NME3-207ENST00000564628 CASZ1Q86V15 1759 aa26.69■■□□□ 1.86
NME3-207ENST00000564628 SOX12O15370 315 aa26.69■■□□□ 1.86
NME3-207ENST00000564628 ANO8Q9HCE9 1232 aaPredicted RBP26.69■■□□□ 1.86
NME3-207ENST00000564628 PROM2Q8N271 834 aa26.68■■□□□ 1.86
NME3-207ENST00000564628 EXOC5O00471 708 aa26.67■■□□□ 1.86
NME3-207ENST00000564628 USP31Q70CQ4 1352 aa26.67■■□□□ 1.86
NME3-207ENST00000564628 USP54Q70EL1 1684 aa26.66■■□□□ 1.86
NME3-207ENST00000564628 TNS2Q63HR2 1409 aa26.65■■□□□ 1.86
NME3-207ENST00000564628 YY1P25490 414 aa26.64■■□□□ 1.86
NME3-207ENST00000564628 DCAF8L1A6NGE4 600 aa26.63■■□□□ 1.85
NME3-207ENST00000564628 TXNRD1Q16881 649 aa26.62■■□□□ 1.85
NME3-207ENST00000564628 USP47Q96K76 1375 aa26.61■■□□□ 1.85
NME3-207ENST00000564628 ERBB3P21860 1342 aa26.61■■□□□ 1.85
NME3-207ENST00000564628 CD163L1Q9NR16 1453 aa26.61■■□□□ 1.85
NME3-207ENST00000564628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.6■■□□□ 1.85
NME3-207ENST00000564628 TESK2Q96S53 571 aa26.6■■□□□ 1.85
NME3-207ENST00000564628 NHSQ6T4R5 1651 aa26.59■■□□□ 1.85
NME3-207ENST00000564628 ST20-MTHFSA0A0A6YYL1 179 aa26.58■■□□□ 1.85
NME3-207ENST00000564628 PDGFDQ9GZP0 370 aaPredicted RBP26.58■■□□□ 1.85
NME3-207ENST00000564628 STK32BQ9NY57 414 aa26.58■■□□□ 1.85
NME3-207ENST00000564628 SLC15A2Q16348 729 aa26.56■■□□□ 1.84
NME3-207ENST00000564628 NME9Q86XW9 330 aa26.56■■□□□ 1.84
NME3-207ENST00000564628 LTN1O94822 1766 aa26.56■■□□□ 1.84
NME3-207ENST00000564628 ZBTB7AO95365 584 aa26.55■■□□□ 1.84
NME3-207ENST00000564628 PTGER2P43116 358 aa26.55■■□□□ 1.84
NME3-207ENST00000564628 HDGFL2Q7Z4V5 671 aaPredicted RBP26.55■■□□□ 1.84
NME3-207ENST00000564628 NLRP2Q9NX02 1062 aa26.55■■□□□ 1.84
NME3-207ENST00000564628 EDC4Q6P2E9 1401 aaKnown RBP26.55■■□□□ 1.84
NME3-207ENST00000564628 IL2RBP14784 551 aa26.54■■□□□ 1.84
NME3-207ENST00000564628 TMC1Q8TDI8 760 aa26.53■■□□□ 1.84
NME3-207ENST00000564628 MYOM1P52179 1685 aa26.53■■□□□ 1.84
NME3-207ENST00000564628 PUS7Q96PZ0 661 aaKnown RBP26.52■■□□□ 1.84
NME3-207ENST00000564628 SLC12A5Q9H2X9 1139 aa26.51■■□□□ 1.83
NME3-207ENST00000564628 TERF2IPQ9NYB0 399 aa26.51■■□□□ 1.83
NME3-207ENST00000564628 SLC24A1O60721 1099 aa26.5■■□□□ 1.83
NME3-207ENST00000564628 ANKRD24Q8TF21 1146 aa26.5■■□□□ 1.83
NME3-207ENST00000564628 MTFR1LQ9H019 292 aa26.5■■□□□ 1.83
NME3-207ENST00000564628 ATF5Q9Y2D1 282 aaPredicted RBP26.49■■□□□ 1.83
NME3-207ENST00000564628 A0A1W2PP64 1363 aa26.48■■□□□ 1.83
NME3-207ENST00000564628 PAPPAQ13219 1627 aa26.48■■□□□ 1.83
NME3-207ENST00000564628 ACSBG1Q96GR2 724 aa26.48■■□□□ 1.83
NME3-207ENST00000564628 SGIP1Q9BQI5 828 aa26.46■■□□□ 1.83
NME3-207ENST00000564628 BTAF1O14981 1849 aa26.46■■□□□ 1.83
NME3-207ENST00000564628 FAM208AQ9UK61 1670 aaKnown RBP26.44■■□□□ 1.82
NME3-207ENST00000564628 IP6K1Q92551 441 aa26.43■■□□□ 1.82
NME3-207ENST00000564628 SYT17Q9BSW7 474 aa26.43■■□□□ 1.82
NME3-207ENST00000564628 FHDC1Q9C0D6 1143 aaPredicted RBP26.43■■□□□ 1.82
NME3-207ENST00000564628 TMF1P82094 1093 aa26.4■■□□□ 1.82
NME3-207ENST00000564628 MAP3K5Q99683 1374 aa26.37■■□□□ 1.81
NME3-207ENST00000564628 ARXQ96QS3 562 aa26.37■■□□□ 1.81
NME3-207ENST00000564628 LRRC4BQ9NT99 713 aa26.37■■□□□ 1.81
NME3-207ENST00000564628 ZNF827Q17R98 1081 aa26.36■■□□□ 1.81
NME3-207ENST00000564628 SLC27A3Q5K4L6 730 aa26.36■■□□□ 1.81
NME3-207ENST00000564628 EIF4G2P78344 907 aaKnown RBP eCLIP26.35■■□□□ 1.81
NME3-207ENST00000564628 COG3Q96JB2 828 aa26.35■■□□□ 1.81
NME3-207ENST00000564628 DDX54Q8TDD1 881 aaKnown RBP26.34■■□□□ 1.81
NME3-207ENST00000564628 QSER1Q2KHR3 1735 aa26.34■■□□□ 1.81
NME3-207ENST00000564628 AKT1S1Q96B36 256 aa26.33■■□□□ 1.81
NME3-207ENST00000564628 LTV1Q96GA3 475 aaPredicted RBP26.33■■□□□ 1.81
NME3-207ENST00000564628 MAP3K19Q56UN5 1328 aa26.33■■□□□ 1.81
NME3-207ENST00000564628 KAT6BQ8WYB5 2073 aa26.32■■□□□ 1.8
NME3-207ENST00000564628 HSPA5P11021 654 aaKnown RBP26.32■■□□□ 1.8
NME3-207ENST00000564628 HOXC9P31274 260 aa26.32■■□□□ 1.8
NME3-207ENST00000564628 CDCA8Q53HL2 280 aa26.32■■□□□ 1.8
NME3-207ENST00000564628 SLC16A10Q8TF71 515 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms