RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 C1QBPQ07021 282 aaKnown RBP18.96■□□□□ 0.63
CNOT1-206ENST00000564557 ZRANB1Q9UGI0 708 aa18.96■□□□□ 0.63
CNOT1-206ENST00000564557 USP31Q70CQ4 1352 aa18.95■□□□□ 0.62
CNOT1-206ENST00000564557 ONECUT3O60422 494 aaPredicted RBP18.95■□□□□ 0.62
CNOT1-206ENST00000564557 COG3Q96JB2 828 aa18.95■□□□□ 0.62
CNOT1-206ENST00000564557 AATKQ6ZMQ8 1374 aa18.94■□□□□ 0.62
CNOT1-206ENST00000564557 ARHGEF25Q86VW2 580 aa18.94■□□□□ 0.62
CNOT1-206ENST00000564557 SPATA31A1Q5TZJ5 1347 aa18.94■□□□□ 0.62
CNOT1-206ENST00000564557 CSB-PGBD3P0DP91 1061 aa18.93■□□□□ 0.62
CNOT1-206ENST00000564557 LARP1Q6PKG0 1096 aaKnown RBP18.93■□□□□ 0.62
CNOT1-206ENST00000564557 KRT27Q7Z3Y8 459 aa18.93■□□□□ 0.62
CNOT1-206ENST00000564557 CAMTA1Q9Y6Y1 1673 aa18.92■□□□□ 0.62
CNOT1-206ENST00000564557 TOM1L2Q6ZVM7 507 aa18.92■□□□□ 0.62
CNOT1-206ENST00000564557 TCP11L2Q8N4U5 519 aa18.91■□□□□ 0.62
CNOT1-206ENST00000564557 THRAP3Q9Y2W1 955 aaKnown RBP18.9■□□□□ 0.62
CNOT1-206ENST00000564557 COL5A2P05997 1499 aaPredicted RBP18.89■□□□□ 0.61
CNOT1-206ENST00000564557 LMO7Q8WWI1 1683 aa18.89■□□□□ 0.61
CNOT1-206ENST00000564557 SF3B2Q13435 895 aaKnown RBP18.88■□□□□ 0.61
CNOT1-206ENST00000564557 BARGINQ6ZT62 677 aa18.88■□□□□ 0.61
CNOT1-206ENST00000564557 CCDC125Q86Z20 511 aa18.88■□□□□ 0.61
CNOT1-206ENST00000564557 AXIN2Q9Y2T1 843 aa18.88■□□□□ 0.61
CNOT1-206ENST00000564557 CRB1P82279 1406 aa18.87■□□□□ 0.61
CNOT1-206ENST00000564557 CACNB1Q02641 598 aaPredicted RBP18.87■□□□□ 0.61
CNOT1-206ENST00000564557 PDE3BQ13370 1112 aa18.87■□□□□ 0.61
CNOT1-206ENST00000564557 WDR17Q8IZU2 1322 aa18.86■□□□□ 0.61
CNOT1-206ENST00000564557 FYB1O15117 783 aa18.86■□□□□ 0.61
CNOT1-206ENST00000564557 GGNBP2Q9H3C7 697 aa18.86■□□□□ 0.61
CNOT1-206ENST00000564557 BRWD3Q6RI45 1802 aa18.86■□□□□ 0.61
CNOT1-206ENST00000564557 NFAT5O94916 1531 aa18.85■□□□□ 0.61
CNOT1-206ENST00000564557 OVOS2A0A0J9YW53 1432 aa18.85■□□□□ 0.61
CNOT1-206ENST00000564557 OVOS2Q6IE36 1432 aa18.85■□□□□ 0.61
CNOT1-206ENST00000564557 AMPHP49418 695 aa18.85■□□□□ 0.61
CNOT1-206ENST00000564557 USP54Q70EL1 1684 aa18.84■□□□□ 0.61
CNOT1-206ENST00000564557 NSD3Q9BZ95 1437 aa18.83■□□□□ 0.61
CNOT1-206ENST00000564557 FOXD4L1Q9NU39 408 aa18.83■□□□□ 0.6
CNOT1-206ENST00000564557 COL18A1P39060 1754 aa18.83■□□□□ 0.6
CNOT1-206ENST00000564557 CGNL1Q0VF96 1302 aa18.82■□□□□ 0.6
CNOT1-206ENST00000564557 CARD10Q9BWT7 1032 aa18.82■□□□□ 0.6
CNOT1-206ENST00000564557 CARD14Q9BXL6 1004 aa18.82■□□□□ 0.6
CNOT1-206ENST00000564557 ABCC6O95255 1503 aa18.81■□□□□ 0.6
CNOT1-206ENST00000564557 IP6K1Q92551 441 aa18.81■□□□□ 0.6
CNOT1-206ENST00000564557 CDCA7Q9BWT1 371 aaPredicted RBP18.81■□□□□ 0.6
CNOT1-206ENST00000564557 NLRP2Q9NX02 1062 aa18.81■□□□□ 0.6
CNOT1-206ENST00000564557 LTN1O94822 1766 aa18.81■□□□□ 0.6
CNOT1-206ENST00000564557 RGPD5Q99666 1765 aa18.81■□□□□ 0.6
CNOT1-206ENST00000564557 MYOM1P52179 1685 aa18.8■□□□□ 0.6
CNOT1-206ENST00000564557 FAM182BQ5T319 152 aa18.8■□□□□ 0.6
CNOT1-206ENST00000564557 ANKRD24Q8TF21 1146 aa18.8■□□□□ 0.6
CNOT1-206ENST00000564557 THSD7AQ9UPZ6 1657 aa18.79■□□□□ 0.6
CNOT1-206ENST00000564557 DDB1Q16531 1140 aa18.79■□□□□ 0.6
CNOT1-206ENST00000564557 FAM196AQ6ZSG2 479 aa18.79■□□□□ 0.6
CNOT1-206ENST00000564557 LTV1Q96GA3 475 aaPredicted RBP18.79■□□□□ 0.6
CNOT1-206ENST00000564557 PANK3Q9H999 370 aa18.79■□□□□ 0.6
CNOT1-206ENST00000564557 BLMP54132 1417 aaPredicted RBP18.79■□□□□ 0.6
CNOT1-206ENST00000564557 CCDC7Q96M83 1385 aa18.79■□□□□ 0.6
CNOT1-206ENST00000564557 ERBB3P21860 1342 aa18.78■□□□□ 0.6
CNOT1-206ENST00000564557 MAP3K19Q56UN5 1328 aa18.78■□□□□ 0.6
CNOT1-206ENST00000564557 ZBTB22O15209 634 aa18.78■□□□□ 0.6
CNOT1-206ENST00000564557 FBLN1P23142 703 aa18.78■□□□□ 0.6
CNOT1-206ENST00000564557 KIF20BQ96Q89 1820 aa18.77■□□□□ 0.6
CNOT1-206ENST00000564557 RRS1Q15050 365 aaKnown RBP18.77■□□□□ 0.6
CNOT1-206ENST00000564557 C11orf95C9JLR9 678 aaPredicted RBP18.76■□□□□ 0.59
CNOT1-206ENST00000564557 HOXC9P31274 260 aa18.76■□□□□ 0.59
CNOT1-206ENST00000564557 EXOC5O00471 708 aa18.75■□□□□ 0.59
CNOT1-206ENST00000564557 BAG6P46379 1132 aa18.75■□□□□ 0.59
CNOT1-206ENST00000564557 KNSTRNQ9Y448 316 aa18.75■□□□□ 0.59
CNOT1-206ENST00000564557 KIF7Q2M1P5 1343 aa18.74■□□□□ 0.59
CNOT1-206ENST00000564557 RTL1A6NKG5 1358 aa18.73■□□□□ 0.59
CNOT1-206ENST00000564557 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
CNOT1-206ENST00000564557 SMG6Q86US8 1419 aaKnown RBP18.72■□□□□ 0.59
CNOT1-206ENST00000564557 TRIM37O94972 964 aa18.71■□□□□ 0.59
CNOT1-206ENST00000564557 IL2RBP14784 551 aa18.71■□□□□ 0.59
CNOT1-206ENST00000564557 DEFB132Q7Z7B7 95 aa18.71■□□□□ 0.59
CNOT1-206ENST00000564557 PARP4Q9UKK3 1724 aaKnown RBP18.71■□□□□ 0.59
CNOT1-206ENST00000564557 MYCNP04198 464 aaPredicted RBP18.7■□□□□ 0.58
CNOT1-206ENST00000564557 TNNT2P45379 298 aaPredicted RBP18.7■□□□□ 0.58
CNOT1-206ENST00000564557 FLT4P35916 1363 aa18.69■□□□□ 0.58
CNOT1-206ENST00000564557 KIF24Q5T7B8 1368 aa18.68■□□□□ 0.58
CNOT1-206ENST00000564557 OVOS2A0A0G2JMS6 1433 aa18.68■□□□□ 0.58
CNOT1-206ENST00000564557 MORC1Q86VD1 984 aa18.68■□□□□ 0.58
CNOT1-206ENST00000564557 EMILIN1Q9Y6C2 1016 aa18.68■□□□□ 0.58
CNOT1-206ENST00000564557 NSD2O96028 1365 aa18.68■□□□□ 0.58
CNOT1-206ENST00000564557 APBA3O96018 575 aa18.67■□□□□ 0.58
CNOT1-206ENST00000564557 HSP90AB2PQ58FF8 381 aa18.67■□□□□ 0.58
CNOT1-206ENST00000564557 RGPD1P0DJD0 1748 aa18.66■□□□□ 0.58
CNOT1-206ENST00000564557 FAM208AQ9UK61 1670 aaKnown RBP18.66■□□□□ 0.58
CNOT1-206ENST00000564557 INSRP06213 1382 aa18.66■□□□□ 0.58
CNOT1-206ENST00000564557 DISP2A7MBM2 1401 aa18.66■□□□□ 0.58
CNOT1-206ENST00000564557 LRRC37A3O60309 1634 aa18.65■□□□□ 0.58
CNOT1-206ENST00000564557 EN1Q05925 392 aaPredicted RBP18.65■□□□□ 0.58
CNOT1-206ENST00000564557 MARCH10Q8NA82 808 aaPredicted RBP18.65■□□□□ 0.58
CNOT1-206ENST00000564557 EP400Q96L91 3159 aa18.65■□□□□ 0.58
CNOT1-206ENST00000564557 WNK3Q9BYP7 1800 aa18.65■□□□□ 0.58
CNOT1-206ENST00000564557 RAPGEF4Q8WZA2 1011 aa18.63■□□□□ 0.57
CNOT1-206ENST00000564557 POLKQ9UBT6 870 aa18.63■□□□□ 0.57
CNOT1-206ENST00000564557 NBPF6Q5VWK0 638 aa18.62■□□□□ 0.57
CNOT1-206ENST00000564557 DDX54Q8TDD1 881 aaKnown RBP18.62■□□□□ 0.57
CNOT1-206ENST00000564557 NBPF4Q96M43 638 aa18.62■□□□□ 0.57
CNOT1-206ENST00000564557 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
CNOT1-206ENST00000564557 TNS2Q63HR2 1409 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms