RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 AXIN2Q9Y2T1 843 aa35.51■■■■□ 3.28
AC009041.3-201ENST00000564390 BARGINQ6ZT62 677 aa35.5■■■■□ 3.27
AC009041.3-201ENST00000564390 SF3B2Q13435 895 aaKnown RBP35.49■■■■□ 3.27
AC009041.3-201ENST00000564390 DEFB132Q7Z7B7 95 aa35.49■■■■□ 3.27
AC009041.3-201ENST00000564390 SLC24A1O60721 1099 aa35.48■■■■□ 3.27
AC009041.3-201ENST00000564390 TMF1P82094 1093 aa35.48■■■■□ 3.27
AC009041.3-201ENST00000564390 RGPD1P0DJD0 1748 aa35.46■■■■□ 3.27
AC009041.3-201ENST00000564390 LTN1O94822 1766 aa35.46■■■■□ 3.27
AC009041.3-201ENST00000564390 PARP4Q9UKK3 1724 aaKnown RBP35.45■■■■□ 3.27
AC009041.3-201ENST00000564390 OVOS2A0A0J9YW53 1432 aa35.44■■■■□ 3.26
AC009041.3-201ENST00000564390 OVOS2Q6IE36 1432 aa35.44■■■■□ 3.26
AC009041.3-201ENST00000564390 WNK3Q9BYP7 1800 aa35.43■■■■□ 3.26
AC009041.3-201ENST00000564390 WDR17Q8IZU2 1322 aa35.43■■■■□ 3.26
AC009041.3-201ENST00000564390 TOM1L2Q6ZVM7 507 aa35.43■■■■□ 3.26
AC009041.3-201ENST00000564390 THRAP3Q9Y2W1 955 aaKnown RBP35.43■■■■□ 3.26
AC009041.3-201ENST00000564390 ABCC6O95255 1503 aa35.42■■■■□ 3.26
AC009041.3-201ENST00000564390 TNS1Q9HBL0 1735 aaKnown RBP35.42■■■■□ 3.26
AC009041.3-201ENST00000564390 ANKRD36BQ8N2N9 1353 aa35.41■■■■□ 3.26
AC009041.3-201ENST00000564390 LRRC37A3O60309 1634 aa35.4■■■■□ 3.26
AC009041.3-201ENST00000564390 MYOM1P52179 1685 aa35.39■■■■□ 3.26
AC009041.3-201ENST00000564390 CSB-PGBD3P0DP91 1061 aa35.38■■■■□ 3.25
AC009041.3-201ENST00000564390 PDE3BQ13370 1112 aa35.38■■■■□ 3.25
AC009041.3-201ENST00000564390 BAG6P46379 1132 aa35.34■■■■□ 3.25
AC009041.3-201ENST00000564390 FAM196AQ6ZSG2 479 aa35.33■■■■□ 3.25
AC009041.3-201ENST00000564390 CDCA8Q53HL2 280 aa35.32■■■■□ 3.24
AC009041.3-201ENST00000564390 TRIM37O94972 964 aa35.31■■■■□ 3.24
AC009041.3-201ENST00000564390 CARD10Q9BWT7 1032 aa35.29■■■■□ 3.24
AC009041.3-201ENST00000564390 COG3Q96JB2 828 aa35.28■■■■□ 3.24
AC009041.3-201ENST00000564390 ERBB3P21860 1342 aa35.28■■■■□ 3.24
AC009041.3-201ENST00000564390 PEAK1Q9H792 1746 aa35.27■■■■□ 3.24
AC009041.3-201ENST00000564390 EN1Q05925 392 aaPredicted RBP35.27■■■■□ 3.24
AC009041.3-201ENST00000564390 KIF20BQ96Q89 1820 aa35.27■■■■□ 3.24
AC009041.3-201ENST00000564390 DISP2A7MBM2 1401 aa35.26■■■■□ 3.24
AC009041.3-201ENST00000564390 DDB1Q16531 1140 aa35.25■■■■□ 3.23
AC009041.3-201ENST00000564390 CCDC7Q96M83 1385 aa35.23■■■■□ 3.23
AC009041.3-201ENST00000564390 OVOS2A0A0G2JMS6 1433 aa35.23■■■■□ 3.23
AC009041.3-201ENST00000564390 FBLN1P23142 703 aa35.22■■■■□ 3.23
AC009041.3-201ENST00000564390 ANKRD24Q8TF21 1146 aa35.22■■■■□ 3.23
AC009041.3-201ENST00000564390 GGNBP2Q9H3C7 697 aa35.22■■■■□ 3.23
AC009041.3-201ENST00000564390 NLRP2Q9NX02 1062 aa35.21■■■■□ 3.23
AC009041.3-201ENST00000564390 FYB1O15117 783 aa35.19■■■■□ 3.22
AC009041.3-201ENST00000564390 HSPA5P11021 654 aaKnown RBP35.19■■■■□ 3.22
AC009041.3-201ENST00000564390 MAP3K19Q56UN5 1328 aa35.19■■■■□ 3.22
AC009041.3-201ENST00000564390 NSD3Q9BZ95 1437 aa35.18■■■■□ 3.22
AC009041.3-201ENST00000564390 EIF4G2P78344 907 aaKnown RBP eCLIP35.18■■■■□ 3.22
AC009041.3-201ENST00000564390 POLR3GLQ9BT43 218 aa35.18■■■■□ 3.22
AC009041.3-201ENST00000564390 CDCA7Q9BWT1 371 aaPredicted RBP35.18■■■■□ 3.22
AC009041.3-201ENST00000564390 APBA3O96018 575 aa35.17■■■■□ 3.22
AC009041.3-201ENST00000564390 EZH2Q15910 746 aaKnown RBP35.17■■■■□ 3.22
AC009041.3-201ENST00000564390 IP6K1Q92551 441 aa35.16■■■■□ 3.22
AC009041.3-201ENST00000564390 CARD14Q9BXL6 1004 aa35.16■■■■□ 3.22
AC009041.3-201ENST00000564390 FAM208AQ9UK61 1670 aaKnown RBP35.15■■■■□ 3.22
AC009041.3-201ENST00000564390 LTV1Q96GA3 475 aaPredicted RBP35.15■■■■□ 3.22
AC009041.3-201ENST00000564390 SBF2Q86WG5 1849 aa35.15■■■■□ 3.22
AC009041.3-201ENST00000564390 TNS2Q63HR2 1409 aa35.15■■■■□ 3.22
AC009041.3-201ENST00000564390 MARCH10Q8NA82 808 aaPredicted RBP35.14■■■■□ 3.22
AC009041.3-201ENST00000564390 RRS1Q15050 365 aaKnown RBP35.12■■■■□ 3.21
AC009041.3-201ENST00000564390 RREB1Q92766 1687 aa35.11■■■■□ 3.21
AC009041.3-201ENST00000564390 HOXC9P31274 260 aa35.11■■■■□ 3.21
AC009041.3-201ENST00000564390 AMPHP49418 695 aa35.11■■■■□ 3.21
AC009041.3-201ENST00000564390 CAMKK2Q96RR4 588 aa35.11■■■■□ 3.21
AC009041.3-201ENST00000564390 PSDA5PKW4 1024 aaPredicted RBP35.09■■■■□ 3.21
AC009041.3-201ENST00000564390 EXOC5O00471 708 aa35.08■■■■□ 3.21
AC009041.3-201ENST00000564390 RGPD2P0DJD1 1756 aa35.08■■■■□ 3.21
AC009041.3-201ENST00000564390 C11orf95C9JLR9 678 aaPredicted RBP35.07■■■■□ 3.2
AC009041.3-201ENST00000564390 RTL1A6NKG5 1358 aa35.07■■■■□ 3.2
AC009041.3-201ENST00000564390 NUP188Q5SRE5 1749 aa35.06■■■■□ 3.2
AC009041.3-201ENST00000564390 IL2RBP14784 551 aa35.06■■■■□ 3.2
AC009041.3-201ENST00000564390 PARD3Q8TEW0 1356 aa35.05■■■■□ 3.2
AC009041.3-201ENST00000564390 PTF1AQ7RTS3 328 aa35.05■■■■□ 3.2
AC009041.3-201ENST00000564390 BCL9O00512 1426 aa35.02■■■■□ 3.2
AC009041.3-201ENST00000564390 SRCAPQ6ZRS2 3230 aa35.01■■■■□ 3.2
AC009041.3-201ENST00000564390 R3HDM1Q15032 1099 aaKnown RBP34.99■■■■□ 3.19
AC009041.3-201ENST00000564390 RGPD3A6NKT7 1758 aaPredicted RBP34.98■■■■□ 3.19
AC009041.3-201ENST00000564390 RGPD4Q7Z3J3 1758 aa34.98■■■■□ 3.19
AC009041.3-201ENST00000564390 BCL11BQ9C0K0 894 aaPredicted RBP34.97■■■■□ 3.19
AC009041.3-201ENST00000564390 CGNL1Q0VF96 1302 aa34.97■■■■□ 3.19
AC009041.3-201ENST00000564390 NHSQ6T4R5 1651 aa34.96■■■■□ 3.19
AC009041.3-201ENST00000564390 FLT4P35916 1363 aa34.95■■■■□ 3.19
AC009041.3-201ENST00000564390 SMG6Q86US8 1419 aaKnown RBP34.95■■■■□ 3.19
AC009041.3-201ENST00000564390 ANKRD26Q9UPS8 1709 aa34.95■■■■□ 3.18
AC009041.3-201ENST00000564390 EMILIN1Q9Y6C2 1016 aa34.94■■■■□ 3.18
AC009041.3-201ENST00000564390 MEGF6O75095 1541 aa34.93■■■■□ 3.18
AC009041.3-201ENST00000564390 HSP90AB2PQ58FF8 381 aa34.93■■■■□ 3.18
AC009041.3-201ENST00000564390 USHBP1Q8N6Y0 703 aa34.92■■■■□ 3.18
AC009041.3-201ENST00000564390 INSRP06213 1382 aa34.91■■■■□ 3.18
AC009041.3-201ENST00000564390 ACSBG1Q96GR2 724 aa34.91■■■■□ 3.18
AC009041.3-201ENST00000564390 LRP5O75197 1615 aa34.91■■■■□ 3.18
AC009041.3-201ENST00000564390 KCNQ2O43526 872 aa34.9■■■■□ 3.18
AC009041.3-201ENST00000564390 NBPF6Q5VWK0 638 aa34.9■■■■□ 3.18
AC009041.3-201ENST00000564390 NBPF4Q96M43 638 aa34.9■■■■□ 3.18
AC009041.3-201ENST00000564390 SHANK3Q9BYB0 1731 aa34.89■■■■□ 3.18
AC009041.3-201ENST00000564390 PANK3Q9H999 370 aa34.89■■■■□ 3.18
AC009041.3-201ENST00000564390 KIF24Q5T7B8 1368 aa34.88■■■■□ 3.17
AC009041.3-201ENST00000564390 PLSCR1O15162 318 aa34.87■■■■□ 3.17
AC009041.3-201ENST00000564390 DDX54Q8TDD1 881 aaKnown RBP34.87■■■■□ 3.17
AC009041.3-201ENST00000564390 PPM1GO15355 546 aaPredicted RBP34.86■■■■□ 3.17
AC009041.3-201ENST00000564390 MAP2P11137 1827 aaKnown RBP34.85■■■■□ 3.17
AC009041.3-201ENST00000564390 TNNT2P45379 298 aaPredicted RBP34.83■■■■□ 3.17
AC009041.3-201ENST00000564390 BTAF1O14981 1849 aa34.83■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms