RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 TRIM37O94972 964 aa23.76■■□□□ 1.39
CCNF-203ENST00000564236 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
CCNF-203ENST00000564236 EZH2Q15910 746 aaKnown RBP23.73■■□□□ 1.39
CCNF-203ENST00000564236 PEAK1Q9H792 1746 aa23.73■■□□□ 1.39
CCNF-203ENST00000564236 TOM1L2Q6ZVM7 507 aa23.72■■□□□ 1.39
CCNF-203ENST00000564236 TESK2Q96S53 571 aa23.72■■□□□ 1.39
CCNF-203ENST00000564236 CDCA7Q9BWT1 371 aaPredicted RBP23.72■■□□□ 1.39
CCNF-203ENST00000564236 BCL9O00512 1426 aa23.72■■□□□ 1.39
CCNF-203ENST00000564236 LRRC37A3O60309 1634 aa23.72■■□□□ 1.39
CCNF-203ENST00000564236 OVOS2A0A0G2JMS6 1433 aa23.71■■□□□ 1.39
CCNF-203ENST00000564236 OVOS2A0A0J9YW53 1432 aa23.71■■□□□ 1.39
CCNF-203ENST00000564236 OVOS2Q6IE36 1432 aa23.71■■□□□ 1.39
CCNF-203ENST00000564236 EDC4Q6P2E9 1401 aaKnown RBP23.71■■□□□ 1.39
CCNF-203ENST00000564236 NINLQ9Y2I6 1382 aa23.71■■□□□ 1.39
CCNF-203ENST00000564236 APBA3O96018 575 aa23.71■■□□□ 1.39
CCNF-203ENST00000564236 CARD10Q9BWT7 1032 aa23.71■■□□□ 1.39
CCNF-203ENST00000564236 ZBTB7CA1YPR0 619 aa23.7■■□□□ 1.38
CCNF-203ENST00000564236 SLC24A1O60721 1099 aa23.7■■□□□ 1.38
CCNF-203ENST00000564236 HDGFL2Q7Z4V5 671 aaPredicted RBP23.69■■□□□ 1.38
CCNF-203ENST00000564236 SLC12A5Q9H2X9 1139 aa23.69■■□□□ 1.38
CCNF-203ENST00000564236 RREB1Q92766 1687 aa23.68■■□□□ 1.38
CCNF-203ENST00000564236 PSDA5PKW4 1024 aaPredicted RBP23.68■■□□□ 1.38
CCNF-203ENST00000564236 DDB1Q16531 1140 aa23.68■■□□□ 1.38
CCNF-203ENST00000564236 A0A1W2PP64 1363 aa23.67■■□□□ 1.38
CCNF-203ENST00000564236 TERF2IPQ9NYB0 399 aa23.67■■□□□ 1.38
CCNF-203ENST00000564236 WNK3Q9BYP7 1800 aa23.67■■□□□ 1.38
CCNF-203ENST00000564236 CCDC7Q96M83 1385 aa23.66■■□□□ 1.38
CCNF-203ENST00000564236 NME9Q86XW9 330 aa23.66■■□□□ 1.38
CCNF-203ENST00000564236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.66■■□□□ 1.38
CCNF-203ENST00000564236 TMC1Q8TDI8 760 aa23.65■■□□□ 1.38
CCNF-203ENST00000564236 ST20-MTHFSA0A0A6YYL1 179 aa23.64■■□□□ 1.37
CCNF-203ENST00000564236 R3HDM1Q15032 1099 aaKnown RBP23.64■■□□□ 1.37
CCNF-203ENST00000564236 ERBB3P21860 1342 aa23.63■■□□□ 1.37
CCNF-203ENST00000564236 SOX12O15370 315 aa23.63■■□□□ 1.37
CCNF-203ENST00000564236 RGPD3A6NKT7 1758 aaPredicted RBP23.63■■□□□ 1.37
CCNF-203ENST00000564236 RGPD4Q7Z3J3 1758 aa23.63■■□□□ 1.37
CCNF-203ENST00000564236 PLSCR1O15162 318 aa23.62■■□□□ 1.37
CCNF-203ENST00000564236 NUP188Q5SRE5 1749 aa23.62■■□□□ 1.37
CCNF-203ENST00000564236 CSB-PGBD3P0DP91 1061 aa23.61■■□□□ 1.37
CCNF-203ENST00000564236 MARCH10Q8NA82 808 aaPredicted RBP23.61■■□□□ 1.37
CCNF-203ENST00000564236 RGPD5Q99666 1765 aa23.6■■□□□ 1.37
CCNF-203ENST00000564236 BCL11BQ9C0K0 894 aaPredicted RBP23.6■■□□□ 1.37
CCNF-203ENST00000564236 TNS2Q63HR2 1409 aa23.59■■□□□ 1.37
CCNF-203ENST00000564236 SBF2Q86WG5 1849 aa23.57■■□□□ 1.36
CCNF-203ENST00000564236 ANKRD36BQ8N2N9 1353 aa23.56■■□□□ 1.36
CCNF-203ENST00000564236 EXOC5O00471 708 aa23.56■■□□□ 1.36
CCNF-203ENST00000564236 NBPF14Q5TI25 921 aa23.56■■□□□ 1.36
CCNF-203ENST00000564236 TIMELESSQ9UNS1 1208 aa23.55■■□□□ 1.36
CCNF-203ENST00000564236 USP47Q96K76 1375 aa23.54■■□□□ 1.36
CCNF-203ENST00000564236 LTN1O94822 1766 aa23.54■■□□□ 1.36
CCNF-203ENST00000564236 CLSPNQ9HAW4 1339 aa23.53■■□□□ 1.36
CCNF-203ENST00000564236 PTF1AQ7RTS3 328 aa23.52■■□□□ 1.36
CCNF-203ENST00000564236 ANKRD24Q8TF21 1146 aa23.52■■□□□ 1.36
CCNF-203ENST00000564236 IP6K1Q92551 441 aa23.52■■□□□ 1.36
CCNF-203ENST00000564236 TMF1P82094 1093 aa23.51■■□□□ 1.35
CCNF-203ENST00000564236 IL2RBP14784 551 aa23.5■■□□□ 1.35
CCNF-203ENST00000564236 NLRP2Q9NX02 1062 aa23.5■■□□□ 1.35
CCNF-203ENST00000564236 PROM2Q8N271 834 aa23.49■■□□□ 1.35
CCNF-203ENST00000564236 COG3Q96JB2 828 aa23.49■■□□□ 1.35
CCNF-203ENST00000564236 FAM208AQ9UK61 1670 aaKnown RBP23.47■■□□□ 1.35
CCNF-203ENST00000564236 CDCA8Q53HL2 280 aa23.46■■□□□ 1.35
CCNF-203ENST00000564236 MAP3K19Q56UN5 1328 aa23.46■■□□□ 1.35
CCNF-203ENST00000564236 RTL1A6NKG5 1358 aa23.45■■□□□ 1.34
CCNF-203ENST00000564236 NHSQ6T4R5 1651 aa23.44■■□□□ 1.34
CCNF-203ENST00000564236 ANO8Q9HCE9 1232 aaPredicted RBP23.44■■□□□ 1.34
CCNF-203ENST00000564236 FYB1O15117 783 aa23.43■■□□□ 1.34
CCNF-203ENST00000564236 HOXC9P31274 260 aa23.43■■□□□ 1.34
CCNF-203ENST00000564236 KCNQ2O43526 872 aa23.41■■□□□ 1.34
CCNF-203ENST00000564236 TXNRD1Q16881 649 aa23.41■■□□□ 1.34
CCNF-203ENST00000564236 SPON1Q9HCB6 807 aa23.4■■□□□ 1.34
CCNF-203ENST00000564236 CASZ1Q86V15 1759 aa23.39■■□□□ 1.33
CCNF-203ENST00000564236 KIF24Q5T7B8 1368 aa23.38■■□□□ 1.33
CCNF-203ENST00000564236 FBLN1P23142 703 aa23.37■■□□□ 1.33
CCNF-203ENST00000564236 AMPHP49418 695 aa23.37■■□□□ 1.33
CCNF-203ENST00000564236 GGNBP2Q9H3C7 697 aa23.35■■□□□ 1.33
CCNF-203ENST00000564236 MYOM1P52179 1685 aa23.35■■□□□ 1.33
CCNF-203ENST00000564236 PAPPAQ13219 1627 aa23.34■■□□□ 1.33
CCNF-203ENST00000564236 SLC15A2Q16348 729 aa23.34■■□□□ 1.33
CCNF-203ENST00000564236 LTV1Q96GA3 475 aaPredicted RBP23.34■■□□□ 1.33
CCNF-203ENST00000564236 ACSBG1Q96GR2 724 aa23.34■■□□□ 1.33
CCNF-203ENST00000564236 CARD14Q9BXL6 1004 aa23.34■■□□□ 1.33
CCNF-203ENST00000564236 RRS1Q15050 365 aaKnown RBP23.33■■□□□ 1.33
CCNF-203ENST00000564236 CGNL1Q0VF96 1302 aa23.33■■□□□ 1.32
CCNF-203ENST00000564236 INSRP06213 1382 aa23.32■■□□□ 1.32
CCNF-203ENST00000564236 STK32BQ9NY57 414 aa23.32■■□□□ 1.32
CCNF-203ENST00000564236 MEGF6O75095 1541 aa23.32■■□□□ 1.32
CCNF-203ENST00000564236 FLT4P35916 1363 aa23.3■■□□□ 1.32
CCNF-203ENST00000564236 PDGFDQ9GZP0 370 aaPredicted RBP23.3■■□□□ 1.32
CCNF-203ENST00000564236 BTAF1O14981 1849 aa23.3■■□□□ 1.32
CCNF-203ENST00000564236 KIF20BQ96Q89 1820 aa23.29■■□□□ 1.32
CCNF-203ENST00000564236 NBPF6Q5VWK0 638 aa23.29■■□□□ 1.32
CCNF-203ENST00000564236 SMG6Q86US8 1419 aaKnown RBP23.29■■□□□ 1.32
CCNF-203ENST00000564236 NBPF4Q96M43 638 aa23.29■■□□□ 1.32
CCNF-203ENST00000564236 NSD3Q9BZ95 1437 aa23.29■■□□□ 1.32
CCNF-203ENST00000564236 ZCRB1Q8TBF4 217 aaKnown RBP23.28■■□□□ 1.32
CCNF-203ENST00000564236 DDX54Q8TDD1 881 aaKnown RBP23.28■■□□□ 1.32
CCNF-203ENST00000564236 SHANK3Q9BYB0 1731 aa23.28■■□□□ 1.32
CCNF-203ENST00000564236 PTGER2P43116 358 aa23.27■■□□□ 1.32
CCNF-203ENST00000564236 NSD2O96028 1365 aa23.27■■□□□ 1.31
CCNF-203ENST00000564236 SLC27A3Q5K4L6 730 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms