RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 TRPM1Q7Z4N2 1603 aa29.78■■■□□ 2.36
HERC2-204ENST00000563945 KTN1Q86UP2 1357 aaKnown RBP29.76■■■□□ 2.35
HERC2-204ENST00000563945 PLSCR1O15162 318 aa29.75■■■□□ 2.35
HERC2-204ENST00000563945 CPSF1Q10570 1443 aaKnown RBP29.75■■■□□ 2.35
HERC2-204ENST00000563945 SPON1Q9HCB6 807 aa29.75■■■□□ 2.35
HERC2-204ENST00000563945 RREB1Q92766 1687 aa29.75■■■□□ 2.35
HERC2-204ENST00000563945 CARD10Q9BWT7 1032 aa29.74■■■□□ 2.35
HERC2-204ENST00000563945 BCL11BQ9C0K0 894 aaPredicted RBP29.74■■■□□ 2.35
HERC2-204ENST00000563945 PIK3C2AO00443 1686 aa29.74■■■□□ 2.35
HERC2-204ENST00000563945 NUP188Q5SRE5 1749 aa29.73■■■□□ 2.35
HERC2-204ENST00000563945 EXOC5O00471 708 aa29.72■■■□□ 2.35
HERC2-204ENST00000563945 DCAF8L1A6NGE4 600 aa29.71■■■□□ 2.35
HERC2-204ENST00000563945 KCNQ2O43526 872 aa29.71■■■□□ 2.35
HERC2-204ENST00000563945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.7■■■□□ 2.35
HERC2-204ENST00000563945 MARCH10Q8NA82 808 aaPredicted RBP29.7■■■□□ 2.35
HERC2-204ENST00000563945 TMC1Q8TDI8 760 aa29.69■■■□□ 2.34
HERC2-204ENST00000563945 CARD11Q9BXL7 1154 aa29.69■■■□□ 2.34
HERC2-204ENST00000563945 COL18A1P39060 1754 aa29.69■■■□□ 2.34
HERC2-204ENST00000563945 LRRC37A3O60309 1634 aa29.67■■■□□ 2.34
HERC2-204ENST00000563945 AKAP12Q02952 1782 aa29.66■■■□□ 2.34
HERC2-204ENST00000563945 CCDC7Q96M83 1385 aa29.65■■■□□ 2.34
HERC2-204ENST00000563945 HDGFL2Q7Z4V5 671 aaPredicted RBP29.65■■■□□ 2.34
HERC2-204ENST00000563945 PEAK1Q9H792 1746 aa29.65■■■□□ 2.34
HERC2-204ENST00000563945 PTF1AQ7RTS3 328 aa29.63■■■□□ 2.33
HERC2-204ENST00000563945 NLRP2Q9NX02 1062 aa29.62■■■□□ 2.33
HERC2-204ENST00000563945 SBF2Q86WG5 1849 aa29.61■■■□□ 2.33
HERC2-204ENST00000563945 RGPD5Q99666 1765 aa29.61■■■□□ 2.33
HERC2-204ENST00000563945 SBNO2Q9Y2G9 1366 aa29.6■■■□□ 2.33
HERC2-204ENST00000563945 BCL9O00512 1426 aa29.6■■■□□ 2.33
HERC2-204ENST00000563945 STK32BQ9NY57 414 aa29.59■■■□□ 2.33
HERC2-204ENST00000563945 RGPD3A6NKT7 1758 aaPredicted RBP29.58■■■□□ 2.33
HERC2-204ENST00000563945 USP31Q70CQ4 1352 aa29.58■■■□□ 2.33
HERC2-204ENST00000563945 RGPD4Q7Z3J3 1758 aa29.58■■■□□ 2.33
HERC2-204ENST00000563945 NME9Q86XW9 330 aa29.58■■■□□ 2.33
HERC2-204ENST00000563945 ANO8Q9HCE9 1232 aaPredicted RBP29.58■■■□□ 2.33
HERC2-204ENST00000563945 TERF2IPQ9NYB0 399 aa29.58■■■□□ 2.33
HERC2-204ENST00000563945 NFAT5O94916 1531 aa29.57■■■□□ 2.32
HERC2-204ENST00000563945 TXNRD1Q16881 649 aa29.57■■■□□ 2.32
HERC2-204ENST00000563945 WNK3Q9BYP7 1800 aa29.57■■■□□ 2.32
HERC2-204ENST00000563945 PROM2Q8N271 834 aa29.56■■■□□ 2.32
HERC2-204ENST00000563945 SLC12A5Q9H2X9 1139 aa29.56■■■□□ 2.32
HERC2-204ENST00000563945 TONSLQ96HA7 1378 aa29.55■■■□□ 2.32
HERC2-204ENST00000563945 YY1P25490 414 aa29.55■■■□□ 2.32
HERC2-204ENST00000563945 ABCC6O95255 1503 aa29.55■■■□□ 2.32
HERC2-204ENST00000563945 NINLQ9Y2I6 1382 aa29.54■■■□□ 2.32
HERC2-204ENST00000563945 IL2RBP14784 551 aa29.53■■■□□ 2.32
HERC2-204ENST00000563945 MON2Q7Z3U7 1717 aa29.53■■■□□ 2.32
HERC2-204ENST00000563945 ERBB3P21860 1342 aa29.52■■■□□ 2.32
HERC2-204ENST00000563945 ACSBG1Q96GR2 724 aa29.52■■■□□ 2.32
HERC2-204ENST00000563945 ZBTB7AO95365 584 aa29.51■■■□□ 2.31
HERC2-204ENST00000563945 ANKRD24Q8TF21 1146 aa29.51■■■□□ 2.31
HERC2-204ENST00000563945 TNS2Q63HR2 1409 aa29.51■■■□□ 2.31
HERC2-204ENST00000563945 SLC15A2Q16348 729 aa29.49■■■□□ 2.31
HERC2-204ENST00000563945 PUS7Q96PZ0 661 aaKnown RBP29.49■■■□□ 2.31
HERC2-204ENST00000563945 EDC4Q6P2E9 1401 aaKnown RBP29.48■■■□□ 2.31
HERC2-204ENST00000563945 ATF5Q9Y2D1 282 aaPredicted RBP29.48■■■□□ 2.31
HERC2-204ENST00000563945 PDGFDQ9GZP0 370 aaPredicted RBP29.46■■■□□ 2.31
HERC2-204ENST00000563945 CD163L1Q9NR16 1453 aa29.46■■■□□ 2.31
HERC2-204ENST00000563945 SLC24A1O60721 1099 aa29.45■■■□□ 2.31
HERC2-204ENST00000563945 KAT6BQ8WYB5 2073 aa29.43■■■□□ 2.3
HERC2-204ENST00000563945 A0A1W2PP64 1363 aa29.42■■■□□ 2.3
HERC2-204ENST00000563945 IP6K1Q92551 441 aa29.42■■■□□ 2.3
HERC2-204ENST00000563945 LTV1Q96GA3 475 aaPredicted RBP29.42■■■□□ 2.3
HERC2-204ENST00000563945 COG3Q96JB2 828 aa29.41■■■□□ 2.3
HERC2-204ENST00000563945 LTN1O94822 1766 aa29.41■■■□□ 2.3
HERC2-204ENST00000563945 MTFR1LQ9H019 292 aa29.4■■■□□ 2.3
HERC2-204ENST00000563945 USP54Q70EL1 1684 aa29.4■■■□□ 2.3
HERC2-204ENST00000563945 CASZ1Q86V15 1759 aa29.39■■■□□ 2.3
HERC2-204ENST00000563945 DDX54Q8TDD1 881 aaKnown RBP29.39■■■□□ 2.3
HERC2-204ENST00000563945 ST20-MTHFSA0A0A6YYL1 179 aa29.37■■■□□ 2.29
HERC2-204ENST00000563945 PTGER2P43116 358 aa29.37■■■□□ 2.29
HERC2-204ENST00000563945 AMPHP49418 695 aa29.37■■■□□ 2.29
HERC2-204ENST00000563945 NHSQ6T4R5 1651 aa29.36■■■□□ 2.29
HERC2-204ENST00000563945 SYTL4Q96C24 671 aaPredicted RBP29.31■■■□□ 2.28
HERC2-204ENST00000563945 TESK2Q96S53 571 aa29.31■■■□□ 2.28
HERC2-204ENST00000563945 SYT17Q9BSW7 474 aa29.31■■■□□ 2.28
HERC2-204ENST00000563945 FHDC1Q9C0D6 1143 aaPredicted RBP29.31■■■□□ 2.28
HERC2-204ENST00000563945 MAP3K19Q56UN5 1328 aa29.29■■■□□ 2.28
HERC2-204ENST00000563945 HOXC9P31274 260 aa29.29■■■□□ 2.28
HERC2-204ENST00000563945 ARXQ96QS3 562 aa29.29■■■□□ 2.28
HERC2-204ENST00000563945 SLC27A3Q5K4L6 730 aa29.28■■■□□ 2.28
HERC2-204ENST00000563945 MYOM1P52179 1685 aa29.27■■■□□ 2.28
HERC2-204ENST00000563945 BTAF1O14981 1849 aa29.27■■■□□ 2.28
HERC2-204ENST00000563945 TMF1P82094 1093 aa29.25■■■□□ 2.27
HERC2-204ENST00000563945 ZCRB1Q8TBF4 217 aaKnown RBP29.25■■■□□ 2.27
HERC2-204ENST00000563945 LRRC4BQ9NT99 713 aa29.25■■■□□ 2.27
HERC2-204ENST00000563945 FBLN1P23142 703 aa29.24■■■□□ 2.27
HERC2-204ENST00000563945 PRIM1P49642 420 aaKnown RBP29.24■■■□□ 2.27
HERC2-204ENST00000563945 ZNF827Q17R98 1081 aa29.24■■■□□ 2.27
HERC2-204ENST00000563945 SGIP1Q9BQI5 828 aa29.23■■■□□ 2.27
HERC2-204ENST00000563945 FAM208AQ9UK61 1670 aaKnown RBP29.23■■■□□ 2.27
HERC2-204ENST00000563945 SLC16A10Q8TF71 515 aa29.22■■■□□ 2.27
HERC2-204ENST00000563945 ANKRD36BQ8N2N9 1353 aa29.22■■■□□ 2.27
HERC2-204ENST00000563945 POLD1P28340 1107 aa29.21■■■□□ 2.27
HERC2-204ENST00000563945 TFCP2L1Q9NZI6 479 aa29.21■■■□□ 2.27
HERC2-204ENST00000563945 GGNBP2Q9H3C7 697 aa29.2■■■□□ 2.26
HERC2-204ENST00000563945 RRS1Q15050 365 aaKnown RBP29.19■■■□□ 2.26
HERC2-204ENST00000563945 CDCA8Q53HL2 280 aa29.19■■■□□ 2.26
HERC2-204ENST00000563945 AKT1S1Q96B36 256 aa29.19■■■□□ 2.26
HERC2-204ENST00000563945 KLHL34Q8N239 644 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms