RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 MARCH10Q8NA82 808 aaPredicted RBP23.48■■□□□ 1.35
RNF40-205ENST00000563909 LRRC37A3O60309 1634 aa23.48■■□□□ 1.35
RNF40-205ENST00000563909 POLR3AO14802 1390 aaPredicted RBP23.47■■□□□ 1.35
RNF40-205ENST00000563909 NLRP13Q86W25 1043 aa23.46■■□□□ 1.35
RNF40-205ENST00000563909 CDK19Q9BWU1 502 aa23.46■■□□□ 1.35
RNF40-205ENST00000563909 MAP3K5Q99683 1374 aa23.45■■□□□ 1.34
RNF40-205ENST00000563909 TOM1L2Q6ZVM7 507 aa23.45■■□□□ 1.34
RNF40-205ENST00000563909 CCDC61Q9Y6R9 512 aa23.44■■□□□ 1.34
RNF40-205ENST00000563909 PLEKHG3A1L390 1219 aa23.42■■□□□ 1.34
RNF40-205ENST00000563909 PELP1Q8IZL8 1130 aaKnown RBP23.42■■□□□ 1.34
RNF40-205ENST00000563909 BCL9O00512 1426 aa23.42■■□□□ 1.34
RNF40-205ENST00000563909 KDM2AQ9Y2K7 1162 aa23.41■■□□□ 1.34
RNF40-205ENST00000563909 KLHL34Q8N239 644 aa23.39■■□□□ 1.33
RNF40-205ENST00000563909 CDCA7Q9BWT1 371 aaPredicted RBP23.39■■□□□ 1.33
RNF40-205ENST00000563909 AATKQ6ZMQ8 1374 aa23.39■■□□□ 1.33
RNF40-205ENST00000563909 TOPAZ1Q8N9V7 1692 aa23.35■■□□□ 1.33
RNF40-205ENST00000563909 WDR17Q8IZU2 1322 aa23.34■■□□□ 1.33
RNF40-205ENST00000563909 SHANK3Q9BYB0 1731 aa23.34■■□□□ 1.33
RNF40-205ENST00000563909 DCAF11Q8TEB1 546 aa23.34■■□□□ 1.33
RNF40-205ENST00000563909 AKAP12Q02952 1782 aa23.34■■□□□ 1.33
RNF40-205ENST00000563909 EXOC5O00471 708 aa23.33■■□□□ 1.33
RNF40-205ENST00000563909 AXIN2Q9Y2T1 843 aa23.33■■□□□ 1.33
RNF40-205ENST00000563909 NLRP6P59044 892 aa23.32■■□□□ 1.32
RNF40-205ENST00000563909 ARHGEF28Q8N1W1 1705 aaKnown RBP23.32■■□□□ 1.32
RNF40-205ENST00000563909 WNK3Q9BYP7 1800 aa23.29■■□□□ 1.32
RNF40-205ENST00000563909 POLD1P28340 1107 aa23.29■■□□□ 1.32
RNF40-205ENST00000563909 ZNF827Q17R98 1081 aa23.29■■□□□ 1.32
RNF40-205ENST00000563909 CARD10Q9BWT7 1032 aa23.29■■□□□ 1.32
RNF40-205ENST00000563909 CSB-PGBD3P0DP91 1061 aa23.28■■□□□ 1.32
RNF40-205ENST00000563909 NLGN2Q8NFZ4 835 aa23.28■■□□□ 1.32
RNF40-205ENST00000563909 ACSBG1Q96GR2 724 aa23.28■■□□□ 1.32
RNF40-205ENST00000563909 PPIP5K1Q6PFW1 1433 aa23.26■■□□□ 1.31
RNF40-205ENST00000563909 COL18A1P39060 1754 aa23.25■■□□□ 1.31
RNF40-205ENST00000563909 GRIN3BO60391 1043 aa23.25■■□□□ 1.31
RNF40-205ENST00000563909 SRPK2P78362 688 aaKnown RBP23.25■■□□□ 1.31
RNF40-205ENST00000563909 SLC16A10Q8TF71 515 aa23.25■■□□□ 1.31
RNF40-205ENST00000563909 PAPPAQ13219 1627 aa23.25■■□□□ 1.31
RNF40-205ENST00000563909 BRD4O60885 1362 aaPredicted RBP23.25■■□□□ 1.31
RNF40-205ENST00000563909 SLIT3O75094 1523 aa23.24■■□□□ 1.31
RNF40-205ENST00000563909 YBX3P16989 372 aaKnown RBP eCLIP23.24■■□□□ 1.31
RNF40-205ENST00000563909 HSPA6P17066 643 aa23.24■■□□□ 1.31
RNF40-205ENST00000563909 STAC3Q96MF2 364 aa23.23■■□□□ 1.31
RNF40-205ENST00000563909 LRRC4BQ9NT99 713 aa23.23■■□□□ 1.31
RNF40-205ENST00000563909 ATP10DQ9P241 1426 aa23.23■■□□□ 1.31
RNF40-205ENST00000563909 NHSQ6T4R5 1651 aa23.22■■□□□ 1.31
RNF40-205ENST00000563909 ARHGEF25Q86VW2 580 aa23.21■■□□□ 1.31
RNF40-205ENST00000563909 GPBP1L1Q9HC44 474 aaPredicted RBP23.21■■□□□ 1.31
RNF40-205ENST00000563909 CABP2Q9NPB3 220 aa23.21■■□□□ 1.31
RNF40-205ENST00000563909 USP6P35125 1406 aa23.2■■□□□ 1.3
RNF40-205ENST00000563909 CPSF1Q10570 1443 aaKnown RBP23.2■■□□□ 1.3
RNF40-205ENST00000563909 AKT1S1Q96B36 256 aa23.2■■□□□ 1.3
RNF40-205ENST00000563909 TNS2Q63HR2 1409 aa23.19■■□□□ 1.3
RNF40-205ENST00000563909 SOX12O15370 315 aa23.18■■□□□ 1.3
RNF40-205ENST00000563909 CABP1Q9NZU7 370 aa23.18■■□□□ 1.3
RNF40-205ENST00000563909 CCDC7Q96M83 1385 aa23.17■■□□□ 1.3
RNF40-205ENST00000563909 PNPLA7Q6ZV29 1317 aa23.17■■□□□ 1.3
RNF40-205ENST00000563909 RGPD5Q99666 1765 aa23.15■■□□□ 1.3
RNF40-205ENST00000563909 KCNH5Q8NCM2 988 aa23.15■■□□□ 1.3
RNF40-205ENST00000563909 ZNF526Q8TF50 670 aaPredicted RBP23.15■■□□□ 1.3
RNF40-205ENST00000563909 TFCP2L1Q9NZI6 479 aa23.15■■□□□ 1.3
RNF40-205ENST00000563909 BTAF1O14981 1849 aa23.14■■□□□ 1.29
RNF40-205ENST00000563909 COL24A1Q17RW2 1714 aa23.13■■□□□ 1.29
RNF40-205ENST00000563909 PIK3C2AO00443 1686 aa23.13■■□□□ 1.29
RNF40-205ENST00000563909 SLC27A3Q5K4L6 730 aa23.12■■□□□ 1.29
RNF40-205ENST00000563909 TRPM1Q7Z4N2 1603 aa23.11■■□□□ 1.29
RNF40-205ENST00000563909 ABCC6O95255 1503 aa23.11■■□□□ 1.29
RNF40-205ENST00000563909 QSER1Q2KHR3 1735 aa23.09■■□□□ 1.29
RNF40-205ENST00000563909 KCNQ4P56696 695 aa23.09■■□□□ 1.29
RNF40-205ENST00000563909 NLRP2Q9NX02 1062 aa23.09■■□□□ 1.29
RNF40-205ENST00000563909 IL2RBP14784 551 aa23.08■■□□□ 1.29
RNF40-205ENST00000563909 CENPJQ9HC77 1338 aaPredicted RBP23.07■■□□□ 1.28
RNF40-205ENST00000563909 KAT6BQ8WYB5 2073 aa23.06■■□□□ 1.28
RNF40-205ENST00000563909 MSH5O43196 834 aa23.06■■□□□ 1.28
RNF40-205ENST00000563909 NBPF1Q3BBV0 1214 aa23.06■■□□□ 1.28
RNF40-205ENST00000563909 TTC21BQ7Z4L5 1316 aa23.06■■□□□ 1.28
RNF40-205ENST00000563909 ADCY9O60503 1353 aa23.05■■□□□ 1.28
RNF40-205ENST00000563909 QRICH2Q9H0J4 1663 aa23.03■■□□□ 1.28
RNF40-205ENST00000563909 TUBGCP6Q96RT7 1819 aa23.01■■□□□ 1.27
RNF40-205ENST00000563909 NFAT5O94916 1531 aa23.01■■□□□ 1.27
RNF40-205ENST00000563909 APLP1P51693 650 aa23■■□□□ 1.27
RNF40-205ENST00000563909 MSL1Q68DK7 614 aa23■■□□□ 1.27
RNF40-205ENST00000563909 DDX54Q8TDD1 881 aaKnown RBP23■■□□□ 1.27
RNF40-205ENST00000563909 SYTL4Q96C24 671 aaPredicted RBP23■■□□□ 1.27
RNF40-205ENST00000563909 ZNF692Q9BU19 519 aaPredicted RBP23■■□□□ 1.27
RNF40-205ENST00000563909 ERBB3P21860 1342 aa23■■□□□ 1.27
RNF40-205ENST00000563909 RAB3GAP2Q9H2M9 1393 aa23■■□□□ 1.27
RNF40-205ENST00000563909 COL23A1Q86Y22 540 aaPredicted RBP22.99■■□□□ 1.27
RNF40-205ENST00000563909 CD2APQ9Y5K6 639 aa22.99■■□□□ 1.27
RNF40-205ENST00000563909 KIF3CO14782 793 aa22.98■■□□□ 1.27
RNF40-205ENST00000563909 DNAJC5GQ8N7S2 189 aa22.98■■□□□ 1.27
RNF40-205ENST00000563909 TTC21AQ8NDW8 1320 aa22.98■■□□□ 1.27
RNF40-205ENST00000563909 KIAA1210Q9ULL0 1709 aa22.97■■□□□ 1.27
RNF40-205ENST00000563909 CAPN15O75808 1086 aa22.96■■□□□ 1.27
RNF40-205ENST00000563909 PRIM1P49642 420 aaKnown RBP22.96■■□□□ 1.27
RNF40-205ENST00000563909 ANKRD24Q8TF21 1146 aa22.95■■□□□ 1.26
RNF40-205ENST00000563909 CCNL1Q9UK58 526 aaPredicted RBP22.95■■□□□ 1.26
RNF40-205ENST00000563909 EVC2Q86UK5 1308 aa22.93■■□□□ 1.26
RNF40-205ENST00000563909 COL13A1Q5TAT6 717 aaPredicted RBP22.92■■□□□ 1.26
RNF40-205ENST00000563909 WWC3Q9ULE0 1092 aa22.92■■□□□ 1.26
RNF40-205ENST00000563909 ANKRD36BQ8N2N9 1353 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms